| response to nutrient levels | GO:0031667 | 370 | 0.111 | |
| response to extracellular stimulus | GO:0009991 | 380 | 0.083 | |
| regulation of protein metabolic process | GO:0051246 | 289 | 0.077 | |
| cellular response to oxidative stress | GO:0034599 | 76 | 0.073 | |
| catabolic process | GO:0009056 | 351 | 0.072 | |
| regulation of protein phosphorylation | GO:0001932 | 183 | 0.067 | |
| cellular response to stress | GO:0033554 | 269 | 0.064 | |
| protein phosphorylation | GO:0006468 | 345 | 0.059 | |
| regulation of protein modification process | GO:0031399 | 194 | 0.059 | |
| positive regulation of multicellular organismal process | GO:0051240 | 387 | 0.058 | |
| regulation of programmed cell death | GO:0043067 | 341 | 0.051 | |
| cellular catabolic process | GO:0044248 | 295 | 0.051 | |
| positive regulation of response to stimulus | GO:0048584 | 285 | 0.051 | |
| lipid metabolic process | GO:0006629 | 283 | 0.051 | |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.049 | |
| regulation of phosphorylation | GO:0042325 | 248 | 0.049 | |
| cellular amino acid biosynthetic process | GO:0008652 | 32 | 0.049 | |
| programmed cell death | GO:0012501 | 392 | 0.048 | |
| cellular response to extracellular stimulus | GO:0031668 | 73 | 0.047 | |
| regulation of proteasomal protein catabolic process | GO:0061136 | 4 | 0.047 | |
| intracellular signal transduction | GO:0035556 | 314 | 0.047 | |
| cellular response to reactive oxygen species | GO:0034614 | 55 | 0.046 | |
| regulation of cellular protein metabolic process | GO:0032268 | 267 | 0.046 | |
| organic acid metabolic process | GO:0006082 | 292 | 0.046 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 260 | 0.040 | |
| organic substance catabolic process | GO:1901575 | 316 | 0.039 | |
| regulation of apoptotic process | GO:0042981 | 335 | 0.038 | |
| response to oxidative stress | GO:0006979 | 186 | 0.038 | |
| response to oxygen levels | GO:0070482 | 265 | 0.037 | |
| apoptotic process | GO:0006915 | 381 | 0.036 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.036 | |
| response to decreased oxygen levels | GO:0036293 | 237 | 0.035 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.035 | |
| positive regulation of cell communication | GO:0010647 | 271 | 0.035 | |
| brain development | GO:0007420 | 247 | 0.035 | |
| positive regulation of protein modification process | GO:0031401 | 142 | 0.034 | |
| single organism carbohydrate metabolic process | GO:0044723 | 118 | 0.033 | |
| response to reactive oxygen species | GO:0000302 | 120 | 0.033 | |
| response to hydrogen peroxide | GO:0042542 | 89 | 0.033 | |
| regulation of signal transduction | GO:0009966 | 318 | 0.033 | |
| cellular response to endogenous stimulus | GO:0071495 | 377 | 0.032 | |
| carbohydrate metabolic process | GO:0005975 | 130 | 0.032 | |
| central nervous system development | GO:0007417 | 311 | 0.032 | |
| response to molecule of bacterial origin | GO:0002237 | 194 | 0.032 | |
| single organism biosynthetic process | GO:0044711 | 342 | 0.031 | |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.031 | |
| cellular response to external stimulus | GO:0071496 | 118 | 0.031 | |
| ion homeostasis | GO:0050801 | 212 | 0.031 | |
| negative regulation of cell death | GO:0060548 | 229 | 0.031 | |
| negative regulation of metabolic process | GO:0009892 | 331 | 0.030 | |
| positive regulation of protein metabolic process | GO:0051247 | 178 | 0.030 | |
| positive regulation of cell differentiation | GO:0045597 | 217 | 0.030 | |
| reactive oxygen species metabolic process | GO:0072593 | 37 | 0.029 | |
| positive regulation of signaling | GO:0023056 | 270 | 0.029 | |
| macromolecule localization | GO:0033036 | 252 | 0.028 | Rat |
| response to hypoxia | GO:0001666 | 231 | 0.028 | |
| response to biotic stimulus | GO:0009607 | 226 | 0.028 | |
| homeostatic process | GO:0042592 | 331 | 0.027 | |
| negative regulation of protein metabolic process | GO:0051248 | 114 | 0.027 | |
| cellular response to organonitrogen compound | GO:0071417 | 197 | 0.027 | |
| cellular response to nitrogen compound | GO:1901699 | 210 | 0.026 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.026 | |
| regulation of molecular function | GO:0065009 | 398 | 0.026 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.026 | |
| negative regulation of cellular metabolic process | GO:0031324 | 281 | 0.025 | |
| nitrogen compound transport | GO:0071705 | 229 | 0.025 | |
| positive regulation of developmental process | GO:0051094 | 283 | 0.025 | |
| regulation of cellular component organization | GO:0051128 | 368 | 0.025 | |
| response to inorganic substance | GO:0010035 | 377 | 0.025 | |
| amine metabolic process | GO:0009308 | 38 | 0.025 | |
| proteolysis | GO:0006508 | 175 | 0.025 | |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.025 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.024 | |
| macroautophagy | GO:0016236 | 4 | 0.024 | |
| single organism catabolic process | GO:0044712 | 283 | 0.024 | |
| regulation of secretion | GO:0051046 | 224 | 0.024 | |
| regulation of response to stress | GO:0080134 | 126 | 0.024 | |
| chemical homeostasis | GO:0048878 | 292 | 0.024 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.023 | |
| positive regulation of signal transduction | GO:0009967 | 175 | 0.023 | |
| response to peptide | GO:1901652 | 292 | 0.023 | |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.022 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 106 | 0.022 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 80 | 0.022 | |
| cellular response to hormone stimulus | GO:0032870 | 247 | 0.021 | |
| multi organism reproductive process | GO:0044703 | 262 | 0.021 | |
| cellular lipid metabolic process | GO:0044255 | 208 | 0.020 | |
| head development | GO:0060322 | 247 | 0.020 | |
| regulation of neuron projection development | GO:0010975 | 161 | 0.020 | |
| cellular response to nutrient levels | GO:0031669 | 60 | 0.020 | |
| positive regulation of cell development | GO:0010720 | 176 | 0.019 | |
| regulation of phosphorus metabolic process | GO:0051174 | 349 | 0.019 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.019 | |
| negative regulation of apoptotic process | GO:0043066 | 181 | 0.019 | |
| protein complex subunit organization | GO:0071822 | 302 | 0.019 | |
| regulation of intracellular signal transduction | GO:1902531 | 218 | 0.018 | |
| single organism reproductive process | GO:0044702 | 297 | 0.018 | |
| single organism intracellular transport | GO:1902582 | 166 | 0.018 | |
| glutamine family amino acid biosynthetic process | GO:0009084 | 2 | 0.018 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.018 | |
| positive regulation of phosphorylation | GO:0042327 | 177 | 0.017 | |
| response to starvation | GO:0042594 | 59 | 0.017 | |
| intracellular transport | GO:0046907 | 185 | 0.017 | |
| cellular response to growth factor stimulus | GO:0071363 | 162 | 0.017 | |
| positive regulation of neuron projection development | GO:0010976 | 99 | 0.017 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.017 | |
| aging | GO:0007568 | 241 | 0.017 | |
| cellular response to lipid | GO:0071396 | 201 | 0.016 | |
| cellular cation homeostasis | GO:0030003 | 180 | 0.016 | |
| organelle organization | GO:0006996 | 266 | 0.016 | |
| metal ion homeostasis | GO:0055065 | 186 | 0.016 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 247 | 0.016 | |
| positive regulation of neurogenesis | GO:0050769 | 165 | 0.016 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.016 | |
| response to nutrient | GO:0007584 | 248 | 0.016 | |
| positive regulation of apoptotic process | GO:0043065 | 154 | 0.016 | |
| cellular response to biotic stimulus | GO:0071216 | 59 | 0.015 | |
| cell type specific apoptotic process | GO:0097285 | 134 | 0.015 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 19 | 0.015 | |
| vesicle mediated transport | GO:0016192 | 181 | 0.015 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.015 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.015 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 167 | 0.015 | |
| positive regulation of cell projection organization | GO:0031346 | 111 | 0.015 | |
| cation homeostasis | GO:0055080 | 195 | 0.015 | |
| regulation of cell development | GO:0060284 | 263 | 0.015 | |
| cation transport | GO:0006812 | 382 | 0.015 | |
| negative regulation of catalytic activity | GO:0043086 | 103 | 0.014 | |
| response to other organism | GO:0051707 | 220 | 0.014 | |
| positive regulation of neuron differentiation | GO:0045666 | 126 | 0.014 | |
| neuron projection development | GO:0031175 | 273 | 0.014 | |
| cellular component assembly | GO:0022607 | 360 | 0.014 | |
| cellular response to starvation | GO:0009267 | 27 | 0.014 | |
| positive regulation of molecular function | GO:0044093 | 230 | 0.014 | |
| alcohol metabolic process | GO:0006066 | 77 | 0.014 | |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.014 | |
| positive regulation of proteasomal protein catabolic process | GO:1901800 | 3 | 0.014 | |
| cellular response to organic cyclic compound | GO:0071407 | 202 | 0.014 | |
| regulation of phosphate metabolic process | GO:0019220 | 349 | 0.014 | |
| positive regulation of transport | GO:0051050 | 245 | 0.014 | |
| response to peptide hormone | GO:0043434 | 278 | 0.014 | |
| signal transduction by phosphorylation | GO:0023014 | 144 | 0.014 | |
| regulation of nervous system development | GO:0051960 | 264 | 0.014 | |
| protein catabolic process | GO:0030163 | 30 | 0.014 | |
| regulation of cell proliferation | GO:0042127 | 359 | 0.014 | |
| gamete generation | GO:0007276 | 124 | 0.014 | |
| divalent inorganic cation homeostasis | GO:0072507 | 165 | 0.014 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 138 | 0.014 | |
| positive regulation of programmed cell death | GO:0043068 | 157 | 0.014 | |
| negative regulation of protein maturation | GO:1903318 | 47 | 0.013 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.013 | |
| response to growth factor | GO:0070848 | 189 | 0.013 | |
| regulation of neurogenesis | GO:0050767 | 247 | 0.013 | |
| chemosensory behavior | GO:0007635 | 2 | 0.013 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 319 | 0.013 | |
| rna biosynthetic process | GO:0032774 | 380 | 0.013 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.013 | |
| spindle organization | GO:0007051 | 2 | 0.013 | |
| positive regulation of cell death | GO:0010942 | 184 | 0.013 | |
| negative regulation of cell proliferation | GO:0008285 | 119 | 0.013 | |
| small molecule biosynthetic process | GO:0044283 | 124 | 0.013 | |
| negative regulation of molecular function | GO:0044092 | 133 | 0.012 | |
| reproductive process | GO:0022414 | 372 | 0.012 | |
| sexual reproduction | GO:0019953 | 148 | 0.012 | |
| cellular protein localization | GO:0034613 | 122 | 0.012 | |
| cellular homeostasis | GO:0019725 | 252 | 0.012 | |
| regulation of homeostatic process | GO:0032844 | 101 | 0.012 | |
| salivary gland development | GO:0007431 | 3 | 0.012 | |
| negative regulation of programmed cell death | GO:0043069 | 183 | 0.012 | |
| cellular response to hydrogen peroxide | GO:0070301 | 42 | 0.012 | |
| cellular divalent inorganic cation homeostasis | GO:0072503 | 162 | 0.012 | |
| response to toxic substance | GO:0009636 | 133 | 0.012 | |
| neuron differentiation | GO:0030182 | 368 | 0.012 | |
| calcium ion homeostasis | GO:0055074 | 162 | 0.012 | |
| response to estrogen | GO:0043627 | 232 | 0.012 | |
| positive regulation of nervous system development | GO:0051962 | 178 | 0.012 | |
| transcription dna templated | GO:0006351 | 377 | 0.012 | |
| male gamete generation | GO:0048232 | 99 | 0.012 | |
| response to bacterium | GO:0009617 | 200 | 0.012 | |
| cellular modified amino acid metabolic process | GO:0006575 | 61 | 0.012 | |
| growth | GO:0040007 | 165 | 0.012 | |
| sequestering of calcium ion | GO:0051208 | 8 | 0.012 | |
| regulation of system process | GO:0044057 | 208 | 0.012 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 197 | 0.012 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 80 | 0.012 | |
| positive regulation of protein phosphorylation | GO:0001934 | 135 | 0.012 | |
| response to lipopolysaccharide | GO:0032496 | 191 | 0.012 | |
| regulation of cellular catabolic process | GO:0031329 | 101 | 0.012 | |
| lipid biosynthetic process | GO:0008610 | 128 | 0.012 | |
| cellular response to peptide | GO:1901653 | 133 | 0.012 | |
| protein complex biogenesis | GO:0070271 | 263 | 0.012 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 197 | 0.011 | |
| negative regulation of response to stimulus | GO:0048585 | 155 | 0.011 | |
| regulation of ion transport | GO:0043269 | 245 | 0.011 | |
| response to axon injury | GO:0048678 | 59 | 0.011 | |
| chromosome segregation | GO:0007059 | 2 | 0.011 | |
| cellular chemical homeostasis | GO:0055082 | 247 | 0.011 | |
| secretion by cell | GO:0032940 | 248 | 0.011 | |
| response to wounding | GO:0009611 | 254 | 0.011 | |
| negative regulation of extrinsic apoptotic signaling pathway | GO:2001237 | 4 | 0.011 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 124 | 0.011 | |
| response to genistein | GO:0033595 | 4 | 0.011 | |
| negative regulation of gene expression | GO:0010629 | 199 | 0.011 | |
| regulation of neuron death | GO:1901214 | 115 | 0.011 | |
| regulation of growth | GO:0040008 | 105 | 0.011 | |
| negative regulation of signaling | GO:0023057 | 157 | 0.011 | |
| calcium ion transport | GO:0006816 | 131 | 0.011 | |
| cytoplasmic transport | GO:0016482 | 115 | 0.011 | |
| protein complex assembly | GO:0006461 | 263 | 0.011 | |
| cellular macromolecule catabolic process | GO:0044265 | 29 | 0.011 | |
| secretion | GO:0046903 | 307 | 0.011 | |
| response to acid chemical | GO:0001101 | 222 | 0.011 | |
| female pregnancy | GO:0007565 | 122 | 0.011 | |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.011 | |
| positive regulation of cellular component organization | GO:0051130 | 200 | 0.011 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 380 | 0.011 | |
| regulation of proteolysis | GO:0030162 | 66 | 0.010 | |
| dna metabolic process | GO:0006259 | 96 | 0.010 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 1 | 0.010 | |
| ion transmembrane transport | GO:0034220 | 365 | 0.010 | |
| axon cargo transport | GO:0008088 | 1 | 0.010 | |
