Rattus norvegicus

0 known processes

Trim54

tripartite motif-containing 54

(Aliases: Rnf30)

Trim54 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
regulation of transcription dna templatedGO:00063553740.116
rna metabolic processGO:00160704060.094
regulation of nucleic acid templated transcriptionGO:19035063800.092
nucleic acid templated transcriptionGO:00976593790.078
cellular component assemblyGO:00226073600.068
cellular component biogenesisGO:00440853680.066
macromolecular complex subunit organizationGO:00439333390.065
Mouse
response to oxidative stressGO:00069791860.057
organelle organizationGO:00069962660.056
Mouse
response to inorganic substanceGO:00100353770.056
regulation of rna biosynthetic processGO:20011413810.053
transcription dna templatedGO:00063513770.053
anatomical structure morphogenesisGO:00096532980.051
cellular response to oxygen containing compoundGO:19017013860.051
cellular response to lipidGO:00713962010.050
nucleoside monophosphate metabolic processGO:0009123930.050
negative regulation of cellular metabolic processGO:00313242810.050
cellular catabolic processGO:00442482950.050
protein complex biogenesisGO:00702712630.049
twitch skeletal muscle contractionGO:001472130.048
organic substance catabolic processGO:19015753160.048
regulation of cellular protein metabolic processGO:00322682670.046
macromolecular complex assemblyGO:00650032730.046
regulation of rna metabolic processGO:00512523910.045
negative regulation of metabolic processGO:00098923310.045
rna biosynthetic processGO:00327743800.043
regulation of cellular component organizationGO:00511283680.043
Mouse
myosin filament assemblyGO:003103410.043
cardiac muscle tissue morphogenesisGO:005500810.042
regulation of cellular localizationGO:00603412630.042
slow twitch skeletal muscle fiber contractionGO:003144420.041
regulation of multicellular organismal developmentGO:20000263760.040
negative regulation of gene expressionGO:00106291990.040
muscle system processGO:00030121150.037
Rat
regulation of cell proliferationGO:00421273590.037
circulatory system developmentGO:00723591340.036
carboxylic acid metabolic processGO:00197522890.036
muscle contractionGO:0006936880.036
Rat
transcription from rna polymerase ii promoterGO:00063662520.036
negative regulation of nitrogen compound metabolic processGO:00511721610.036
homeostatic processGO:00425923310.035
protein complex assemblyGO:00064612630.035
response to external biotic stimulusGO:00432072210.035
response to hypoxiaGO:00016662310.035
reproductive processGO:00224143720.035
response to reactive oxygen speciesGO:00003021200.034
cellular component morphogenesisGO:00329891550.033
positive regulation of cell communicationGO:00106472710.033
protein complex subunit organizationGO:00718223020.033
Mouse
response to peptideGO:19016522920.032
catabolic processGO:00090563510.032
nucleoside phosphate metabolic processGO:00067532830.032
positive regulation of gene expressionGO:00106282440.032
organophosphate metabolic processGO:00196373700.032
myosin filament organizationGO:003103320.032
metal ion transportGO:00300012890.032
nucleotide metabolic processGO:00091172790.032
protein localizationGO:00081041910.031
oxoacid metabolic processGO:00434362900.030
secretionGO:00469033070.030
regulation of system processGO:00440572080.030
Rat
carbohydrate derivative metabolic processGO:19011353460.030
programmed cell deathGO:00125013920.030
locomotionGO:00400112370.029
response to metal ionGO:00100382530.029
negative regulation of macromolecule metabolic processGO:00106052600.029
regulation of metal ion transportGO:00109591180.029
regulation of catalytic activityGO:00507903040.028
response to woundingGO:00096112540.028
lipid metabolic processGO:00066292830.028
heart morphogenesisGO:000300730.028
response to oxygen levelsGO:00704822650.028
response to biotic stimulusGO:00096072260.028
response to corticosteroidGO:00319602350.028
Rat
voluntary skeletal muscle contractionGO:000301030.028
regulation of phosphorus metabolic processGO:00511743490.027
cytoskeleton organizationGO:00070101110.027
Mouse
cellular response to stressGO:00335542690.027
purine containing compound catabolic processGO:00725231380.027
circulatory system processGO:00030131830.027
nucleobase containing small molecule metabolic processGO:00550863160.027
regulation of phosphorylationGO:00423252480.026
negative regulation of nucleobase containing compound metabolic processGO:00459341530.026
regulation of protein metabolic processGO:00512462890.026
heart developmentGO:0007507720.026
cell projection organizationGO:00300303020.026
wound healingGO:00420601220.025
cellular response to endogenous stimulusGO:00714953770.025
response to decreased oxygen levelsGO:00362932370.025
macromolecule localizationGO:00330362520.025
organic acid metabolic processGO:00060822920.025
reproductionGO:00000032450.025
divalent metal ion transportGO:00708381320.025
striated muscle contractionGO:0006941440.025
actin myosin filament slidingGO:003327520.024
negative regulation of biosynthetic processGO:00098901680.024
regulation of secretionGO:00510462240.024
negative regulation of cellular biosynthetic processGO:00313271610.024
regulation of transcription from rna polymerase ii promoterGO:00063572340.024
positive regulation of cellular component organizationGO:00511302000.024
response to glucocorticoidGO:00513842230.024
Rat
single organism reproductive processGO:00447022970.024
response to temperature stimulusGO:0009266940.023
positive regulation of response to stimulusGO:00485842850.023
cellular response to organic cyclic compoundGO:00714072020.023
proteolysisGO:00065081750.023
purine nucleoside metabolic processGO:00422781690.023
cardiovascular system developmentGO:00723581340.023
response to other organismGO:00517072200.023
regulation of programmed cell deathGO:00430673410.023
aromatic compound catabolic processGO:00194391680.023
protein phosphorylationGO:00064683450.023
response to estrogenGO:00436272320.022
intracellular signal transductionGO:00355563140.022
response to electrical stimulus involved in regulation of muscle adaptationGO:001487840.022
Rat
neuron differentiationGO:00301823680.022
regulation of apoptotic processGO:00429813350.022
hormone transportGO:00099141210.022
positive regulation of cellular biosynthetic processGO:00313282950.022
neuron developmentGO:00486662860.022
positive regulation of multicellular organismal processGO:00512403870.021
cellular response to organonitrogen compoundGO:00714171970.021
single organism catabolic processGO:00447122830.021
nucleoside triphosphate metabolic processGO:00091411440.021
cellular ketone metabolic processGO:0042180510.021
regulation of hormone levelsGO:00108171870.021
tissue developmentGO:00098882520.021
muscle filament slidingGO:003004920.021
anatomical structure formation involved in morphogenesisGO:0048646830.021
divalent inorganic cation transportGO:00725111340.021
regulation of cellular amino acid metabolic processGO:000652120.021
blood circulationGO:00080151830.021
regulation of cell differentiationGO:00455953200.021
transmembrane transportGO:00550854120.021
response to estradiolGO:00323551640.020
defense responseGO:00069521940.020
ribose phosphate metabolic processGO:00196932350.020
multicellular organismal movementGO:0050879170.020
apoptotic processGO:00069153810.020
positive regulation of signalingGO:00230562700.020
glycosyl compound metabolic processGO:19016571820.020
purine nucleoside catabolic processGO:00061521240.020
cell morphogenesisGO:00009021420.020
positive regulation of developmental processGO:00510942830.020
cellular amine metabolic processGO:0044106380.020
purine ribonucleoside metabolic processGO:00461281680.020
regulation of molecular functionGO:00650093980.020
purine nucleoside monophosphate metabolic processGO:0009126840.020
cation transportGO:00068123820.020
nucleoside metabolic processGO:00091161790.020
cellular chemical homeostasisGO:00550822470.020
secretion by cellGO:00329402480.019
cell cell signalingGO:00072673350.019
regulation of ion transportGO:00432692450.019
positive regulation of molecular functionGO:00440932300.019
regulation of secretion by cellGO:19035302080.019
cellular amino acid metabolic processGO:00065201070.019
response to growth factorGO:00708481890.019
agingGO:00075682410.019
ribonucleotide metabolic processGO:00092592310.019
erythrocyte differentiationGO:003021810.019
purine containing compound metabolic processGO:00725212530.019
regulation of establishment of planar polarityGO:009017520.019
response to lipopolysaccharideGO:00324961910.019
cardiac ventricle developmentGO:000323110.019
positive regulation of nucleobase containing compound metabolic processGO:00459353190.019
muscle structure developmentGO:0061061870.019
establishment of protein localizationGO:00451841410.019
ribonucleoside metabolic processGO:00091191740.019
response to bacteriumGO:00096172000.019
response to molecule of bacterial originGO:00022371940.019
intracellular transportGO:00469071850.018
positive regulation of biosynthetic processGO:00098913190.018
amine metabolic processGO:0009308380.018
response to ketoneGO:19016541820.018
regulation of protein modification processGO:00313991940.018
cellular protein localizationGO:00346131220.018
multicellular organismal reproductive processGO:00486092330.018
negative regulation of macromolecule biosynthetic processGO:00105581480.018
organonitrogen compound catabolic processGO:19015651790.018
positive regulation of cell differentiationGO:00455972170.018
response to heatGO:0009408600.018
organophosphate catabolic processGO:00464341480.018
purine ribonucleotide catabolic processGO:00091541360.018
multi organism reproductive processGO:00447032620.018
positive regulation of rna biosynthetic processGO:19026801970.018
neuron projection morphogenesisGO:00488121220.018
ribonucleoside triphosphate metabolic processGO:00091991410.017
response to nutrient levelsGO:00316673700.017
response to radiationGO:00093141370.017
multicellular organism reproductionGO:00325042330.017
oxidation reduction processGO:00551143040.017
sexual reproductionGO:00199531480.017
posttranscriptional regulation of gene expressionGO:0010608370.017
positive regulation of cell deathGO:00109421840.017
nitrogen compound transportGO:00717052290.017
musculoskeletal movementGO:0050881170.017
epithelium developmentGO:0060429960.017
muscle organ morphogenesisGO:004864410.017
positive regulation of programmed cell deathGO:00430681570.017
cell morphogenesis involved in differentiationGO:00009041190.017
positive regulation of phosphorylationGO:00423271770.016
response to peptide hormoneGO:00434342780.016
protein oligomerizationGO:00512591910.016
positive regulation of nitrogen compound metabolic processGO:00511733340.016
regulation of phosphate metabolic processGO:00192203490.016
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulumGO:001088040.016
cellular response to nitrogen compoundGO:19016992100.016
regulation of neurogenesisGO:00507672470.016
negative regulation of programmed cell deathGO:00430691830.016
regulation of protein phosphorylationGO:00019321830.016
positive regulation of protein metabolic processGO:00512471780.016
cellular cation homeostasisGO:00300031800.016
dephosphorylationGO:0016311980.016
cellular response to peptideGO:19016531330.016
organic cyclic compound catabolic processGO:19013611750.016
cellular nitrogen compound catabolic processGO:00442701630.016
tube developmentGO:0035295890.016
positive regulation of cellular protein metabolic processGO:00322701670.016
regulation of intracellular signal transductionGO:19025312180.016
gliogenesisGO:0042063930.016
regulation of cell projection organizationGO:00313441750.016
regulation of cellular ketone metabolic processGO:0010565270.016
head developmentGO:00603222470.016
positive regulation of phosphorus metabolic processGO:00105622620.016
negative regulation of cell deathGO:00605482290.015
negative regulation of nucleic acid templated transcriptionGO:19035071170.015
purine nucleotide metabolic processGO:00061632290.015
single organism organelle organizationGO:19025891800.015
Mouse
positive regulation of cellular amino acid metabolic processGO:004576410.015
purine ribonucleoside monophosphate metabolic processGO:0009167840.015
positive regulation of cellular amine metabolic processGO:003324030.015
cellular response to alcoholGO:0097306870.015
organelle assemblyGO:0070925220.015
purine nucleotide catabolic processGO:00061951360.015
muscle cell differentiationGO:0042692520.015
nucleoside triphosphate catabolic processGO:00091431230.015
organophosphate biosynthetic processGO:00904071430.015
purine nucleoside monophosphate catabolic processGO:0009128550.015
negative regulation of cardiac muscle tissue developmentGO:005502630.015
ribonucleoside triphosphate catabolic processGO:00092031220.015
response to extracellular stimulusGO:00099913800.015
female pregnancyGO:00075651220.015
cellular protein complex assemblyGO:0043623440.015
regulation of anatomical structure morphogenesisGO:00226031410.015
central nervous system developmentGO:00074173110.015
skeletal muscle cell differentiationGO:003591420.015
neuron projection developmentGO:00311752730.015
response to nutrientGO:00075842480.014
single organism biosynthetic processGO:00447113420.014
regulation of nervous system developmentGO:00519602640.014
regulation of cellular amine metabolic processGO:003323880.014
regulation of tube sizeGO:0035150890.014
establishment of tissue polarityGO:000716420.014
regulation of mapk cascadeGO:00434081160.014
regulation of blood vessel sizeGO:0050880890.014
ribonucleoside monophosphate metabolic processGO:0009161880.014
positive regulation of macromolecule biosynthetic processGO:00105572470.014
regulation of neuron projection developmentGO:00109751610.014
growthGO:00400071650.014
heterocycle catabolic processGO:00467001670.014
ribonucleoside monophosphate catabolic processGO:0009158550.014
muscle organ developmentGO:0007517500.014
negative regulation of cellular protein metabolic processGO:00322691060.014
positive regulation of transportGO:00510502450.014
ion transmembrane transportGO:00342203650.014
cell part morphogenesisGO:00329901230.014
synaptic growth at neuromuscular junctionGO:005112410.014
response to hydrogen peroxideGO:0042542890.014
cellular response to tumor necrosis factorGO:0071356460.013
purine ribonucleotide metabolic processGO:00091502270.013
response to monosaccharideGO:00342841590.013
cellular response to abiotic stimulusGO:0071214850.013
cold acclimationGO:000963110.013
chemical homeostasisGO:00488782920.013
protein modification by small protein conjugationGO:0032446310.013
Rat
response to glucoseGO:00097491360.013
striated muscle cell developmentGO:0055002260.013
positive regulation of cell proliferationGO:00082842490.013
regulation of neuron deathGO:19012141150.013
negative regulation of response to stimulusGO:00485851550.013
response to acid chemicalGO:00011012220.013
purine ribonucleoside triphosphate catabolic processGO:00092071220.013
gastrulationGO:000736920.013
cellular response to hormone stimulusGO:00328702470.013
cofactor metabolic processGO:0051186950.013
brain developmentGO:00074202470.013
cellular response to oxidative stressGO:0034599760.013
protein homooligomerizationGO:0051260910.013
regulation of response to stressGO:00801341260.013
purine nucleoside triphosphate catabolic processGO:00091461220.012
neurological system processGO:00508772190.012
endomembrane system organizationGO:0010256480.012
anterior posterior pattern specificationGO:000995210.012
nucleoside phosphate catabolic processGO:19012921400.012
cellular macromolecule localizationGO:00707271220.012
positive regulation of protein phosphorylationGO:00019341350.012
reproductive structure developmentGO:00486081280.012
axis specificationGO:000979840.012
cellular response to molecule of bacterial originGO:0071219560.012
reproductive system developmentGO:00614581280.012
carbohydrate derivative catabolic processGO:19011361470.012
single organism intracellular transportGO:19025821660.012
nucleobase containing compound catabolic processGO:00346551520.012
chromosome segregationGO:000705920.012
multicellular organism growthGO:003526410.012
regulation of muscle system processGO:0090257790.012
Rat
cell growthGO:00160491040.012
regulation of insulin secretionGO:0050796650.011
muscle tissue morphogenesisGO:006041510.011
heart contractionGO:0060047570.011
regulation of protein localizationGO:0032880810.011
positive regulation of catalytic activityGO:00430851840.011
regenerationGO:00310991630.011
alcohol metabolic processGO:0006066770.011
cellular macromolecular complex assemblyGO:0034622580.011
organ morphogenesisGO:0009887750.011
response to carbohydrateGO:00097431830.011
mapk cascadeGO:00001651400.011
behaviorGO:00076102050.011
response to activityGO:0014823730.011
negative regulation of molecular functionGO:00440921330.011
regulation of cell developmentGO:00602842630.011
response to mechanical stimulusGO:00096121340.011
regulation of catabolic processGO:00098941130.011
peptide hormone secretionGO:0030072840.011
positive regulation of signal transductionGO:00099671750.011
response to cytokineGO:00340972150.011
Rat
positive regulation of transcription dna templatedGO:00458931970.011
negative regulation of apoptotic processGO:00430661810.011
positive regulation of rna metabolic processGO:00512542030.011
epithelial cell differentiationGO:0030855710.011
response to insulinGO:00328681330.011
protein processingGO:0016485680.011
purine ribonucleoside catabolic processGO:00461301240.011
cardiac muscle contractionGO:0060048270.011
positive regulation of protein modification processGO:00314011420.011
endoplasmic reticulum organizationGO:000702910.011
organic hydroxy compound metabolic processGO:19016151150.011
ribonucleoside catabolic processGO:00424541260.011
calcium ion transportGO:00068161310.011
positive regulation of apoptotic processGO:00430651540.011
cellular divalent inorganic cation homeostasisGO:00725031620.011
insulin secretionGO:0030073690.010
adult locomotory behaviorGO:000834440.010
cation homeostasisGO:00550801950.010
protein transportGO:00150311320.010
ion homeostasisGO:00508012120.010
regulation of cell morphogenesis involved in differentiationGO:0010769720.010
glycosyl compound catabolic processGO:19016581260.010
cellular calcium ion homeostasisGO:00068741600.010
cellular response to growth factor stimulusGO:00713631620.010
negative regulation of rna metabolic processGO:00512531230.010
gamete generationGO:00072761240.010
reactive oxygen species metabolic processGO:0072593370.010
cellular metal ion homeostasisGO:00068751720.010
negative regulation of cellular component organizationGO:0051129830.010
Mouse
regulation of response to woundingGO:1903034690.010
coenzyme metabolic processGO:0006732860.010
negative regulation of transcription dna templatedGO:00458921160.010
morphogenesis of a polarized epitheliumGO:000173810.010
purine ribonucleoside triphosphate metabolic processGO:00092051400.010
spermatogenesisGO:0007283990.010
cell type specific apoptotic processGO:00972851340.010
inflammatory responseGO:00069541500.010
negative regulation of multicellular organismal processGO:00512412030.010
positive regulation of nucleic acid templated transcriptionGO:19035081970.010
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathwayGO:009010120.010
small molecule biosynthetic processGO:00442831240.010
regulation of blood circulationGO:19035221100.010
atp metabolic processGO:0046034720.010
skeletal muscle contractionGO:0003009170.010
locomotor rhythmGO:004547510.010

Trim54 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
musculoskeletal system diseaseDOID:1700.073
intrinsic cardiomyopathyDOID:006003600.073
muscle tissue diseaseDOID:6600.073
disease of anatomical entityDOID:700.073
cardiomyopathyDOID:005070000.073
heart diseaseDOID:11400.073
muscular diseaseDOID:008000000.073
myopathyDOID:42300.073
cardiovascular system diseaseDOID:128700.073
muscular dystrophyDOID:988400.032
inherited metabolic disorderDOID:65500.024
disease of metabolismDOID:001466700.024
nervous system diseaseDOID:86300.015
dilated cardiomyopathyDOID:1293000.011