IMP: Integrative Multi-species Prediction

Rattus norvegicus

0 known processes

Snrpb

small nuclear ribonucleoprotein polypeptides B and B1

RGD: 621301
Entrez: 171365
Ensembl: ENSRNOG00000006961
UniProtKB: B0BN51

Process Predictions
Disease Predictions

Snrpb biological process predictions

Show only novel predictionsHighlight processes of functional analogs

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Biological process	GO term ID	Process size	Probability	Func Analog Org
entrainment of circadian clock	GO:0009649	3	0.489
rna metabolic process	GO:0016070	406	0.250	Human
circadian regulation of gene expression	GO:0032922	3	0.235
regulation of programmed cell death	GO:0043067	341	0.194
glucan metabolic process	GO:0044042	23	0.189
glucan biosynthetic process	GO:0009250	15	0.152
carbohydrate metabolic process	GO:0005975	130	0.150
polysaccharide metabolic process	GO:0005976	25	0.142
tissue development	GO:0009888	252	0.140
rhythmic process	GO:0048511	156	0.137
nucleic acid templated transcription	GO:0097659	379	0.134
organic substance catabolic process	GO:1901575	316	0.129
positive regulation of gene expression	GO:0010628	244	0.122
negative regulation of cellular biosynthetic process	GO:0031327	161	0.120
glycogen biosynthetic process	GO:0005978	15	0.117
positive regulation of programmed cell death	GO:0043068	157	0.116
alternative mrna splicing via spliceosome	GO:0000380	4	0.115
apoptotic process	GO:0006915	381	0.109
positive regulation of apoptotic process	GO:0043065	154	0.105
single organism reproductive process	GO:0044702	297	0.096
regulation of rna metabolic process	GO:0051252	391	0.092
programmed cell death	GO:0012501	392	0.091
organelle organization	GO:0006996	266	0.088
negative regulation of cellular metabolic process	GO:0031324	281	0.088
neuron projection development	GO:0031175	273	0.083
positive regulation of cell death	GO:0010942	184	0.081
intracellular transport	GO:0046907	185	0.081
glycogen metabolic process	GO:0005977	23	0.080
negative regulation of nitrogen compound metabolic process	GO:0051172	161	0.079
cellular protein localization	GO:0034613	122	0.078
regulation of nucleic acid templated transcription	GO:1903506	380	0.076
anatomical structure morphogenesis	GO:0009653	298	0.076
cellular amino acid biosynthetic process	GO:0008652	32	0.074
regulation of apoptotic process	GO:0042981	335	0.073
macromolecule localization	GO:0033036	252	0.073
negative regulation of macromolecule metabolic process	GO:0010605	260	0.073
transcription dna templated	GO:0006351	377	0.071
positive regulation of rna biosynthetic process	GO:1902680	197	0.070
negative regulation of rna metabolic process	GO:0051253	123	0.069
regulation of rna biosynthetic process	GO:2001141	381	0.069
cellular macromolecular complex assembly	GO:0034622	58	0.068	Human
negative regulation of cell death	GO:0060548	229	0.068
positive regulation of nucleobase containing compound metabolic process	GO:0045935	319	0.068
mrna metabolic process	GO:0016071	20	0.067	Human
reproductive process	GO:0022414	372	0.066
cellular response to endogenous stimulus	GO:0071495	377	0.066
regulation of transcription dna templated	GO:0006355	374	0.066
negative regulation of cellular macromolecule biosynthetic process	GO:2000113	141	0.065
negative regulation of biosynthetic process	GO:0009890	168	0.063
regulation of cellular component organization	GO:0051128	368	0.063
regulation of vesicle mediated transport	GO:0060627	81	0.063
cell cell signaling	GO:0007267	335	0.062
cellular amino acid metabolic process	GO:0006520	107	0.061
cellular polysaccharide metabolic process	GO:0044264	23	0.060
cell type specific apoptotic process	GO:0097285	134	0.060
neuron differentiation	GO:0030182	368	0.060
positive regulation of transcription dna templated	GO:0045893	197	0.059
amine metabolic process	GO:0009308	38	0.057
chromatin modification	GO:0016568	33	0.057
gamete generation	GO:0007276	124	0.056
cell cycle	GO:0007049	101	0.056
transcription from rna polymerase ii promoter	GO:0006366	252	0.056
meiotic cell cycle process	GO:1903046	3	0.055
multicellular organism reproduction	GO:0032504	233	0.054
circadian rhythm	GO:0007623	88	0.052
positive regulation of nitrogen compound metabolic process	GO:0051173	334	0.052
energy derivation by oxidation of organic compounds	GO:0015980	46	0.051
cell cycle process	GO:0022402	57	0.051
positive regulation of nucleic acid templated transcription	GO:1903508	197	0.051
positive regulation of macromolecule biosynthetic process	GO:0010557	247	0.051
positive regulation of developmental process	GO:0051094	283	0.051
cellular glucan metabolic process	GO:0006073	23	0.050
circulatory system development	GO:0072359	134	0.049
generation of precursor metabolites and energy	GO:0006091	62	0.048
positive regulation of response to stimulus	GO:0048584	285	0.048
positive regulation of extrinsic apoptotic signaling pathway in absence of ligand	GO:2001241	2	0.048
regulation of transcription from rna polymerase ii promoter	GO:0006357	234	0.047
positive regulation of rna metabolic process	GO:0051254	203	0.047
behavior	GO:0007610	205	0.046
energy reserve metabolic process	GO:0006112	25	0.046
regulation of cellular amino acid metabolic process	GO:0006521	2	0.045
regulation of cellular amine metabolic process	GO:0033238	8	0.044
regulation of multicellular organismal development	GO:2000026	376	0.044
positive regulation of cell communication	GO:0010647	271	0.044
rna biosynthetic process	GO:0032774	380	0.043
hepaticobiliary system development	GO:0061008	90	0.043
cell growth	GO:0016049	104	0.042
protein dephosphorylation	GO:0006470	38	0.042
positive regulation of intracellular signal transduction	GO:1902533	138	0.042
epidermal growth factor receptor signaling pathway	GO:0007173	23	0.041
cellular macromolecule localization	GO:0070727	122	0.041
multi organism reproductive process	GO:0044703	262	0.040
cellular response to growth factor stimulus	GO:0071363	162	0.039
cellular component biogenesis	GO:0044085	368	0.039	Human
oxidation reduction process	GO:0055114	304	0.039
regulation of intracellular signal transduction	GO:1902531	218	0.039
regulation of signal transduction	GO:0009966	318	0.038
multicellular organismal reproductive process	GO:0048609	233	0.038
negative regulation of nucleobase containing compound metabolic process	GO:0045934	153	0.038
chromatin remodeling	GO:0006338	3	0.038
negative regulation of metabolic process	GO:0009892	331	0.037
positive regulation of signaling	GO:0023056	270	0.037
regulation of molecular function	GO:0065009	398	0.037
regulation of cellular protein metabolic process	GO:0032268	267	0.037
cellular response to oxygen containing compound	GO:1901701	386	0.037
photoperiodism	GO:0009648	4	0.036
brain development	GO:0007420	247	0.036
positive regulation of signal transduction	GO:0009967	175	0.036
carbohydrate derivative biosynthetic process	GO:1901137	124	0.036
intracellular signal transduction	GO:0035556	314	0.036
single organism biosynthetic process	GO:0044711	342	0.035
locomotion	GO:0040011	237	0.035
catabolic process	GO:0009056	351	0.035
muscle structure development	GO:0061061	87	0.034
central nervous system development	GO:0007417	311	0.034
developmental growth	GO:0048589	100	0.033
chemotaxis	GO:0006935	66	0.033
carbohydrate catabolic process	GO:0016052	40	0.033
regulation of cellular ketone metabolic process	GO:0010565	27	0.032
cellular amine metabolic process	GO:0044106	38	0.032
response to growth factor	GO:0070848	189	0.031
negative regulation of nucleic acid templated transcription	GO:1903507	117	0.031
positive regulation of cellular biosynthetic process	GO:0031328	295	0.031
muscle cell differentiation	GO:0042692	52	0.031
germ cell migration	GO:0008354	1	0.030
single organism organelle organization	GO:1902589	180	0.030
regulation of cell development	GO:0060284	263	0.030
developmental process involved in reproduction	GO:0003006	159	0.029
synaptic transmission	GO:0007268	235	0.029
purine ribonucleotide metabolic process	GO:0009150	227	0.029
negative regulation of signaling	GO:0023057	157	0.029
negative regulation of macromolecule biosynthetic process	GO:0010558	148	0.029
g protein coupled receptor signaling pathway	GO:0007186	242	0.028
protein complex subunit organization	GO:0071822	302	0.028
cellular response to external stimulus	GO:0071496	118	0.028
carbohydrate derivative metabolic process	GO:1901135	346	0.028
regulation of organelle organization	GO:0033043	80	0.027
negative regulation of gene expression	GO:0010629	199	0.027
gland development	GO:0048732	155	0.027
regulation of cell growth	GO:0001558	85	0.027
reproduction	GO:0000003	245	0.027
sexual reproduction	GO:0019953	148	0.027
regulation of growth	GO:0040008	105	0.027
single organism carbohydrate metabolic process	GO:0044723	118	0.027
regulation of cell cycle	GO:0051726	73	0.026
response to nutrient levels	GO:0031667	370	0.026
cellular component assembly	GO:0022607	360	0.026	Human
chromosome segregation	GO:0007059	2	0.025
chemical homeostasis	GO:0048878	292	0.025
tube development	GO:0035295	89	0.025
organonitrogen compound catabolic process	GO:1901565	179	0.025
cell projection organization	GO:0030030	302	0.025
macromolecular complex subunit organization	GO:0043933	339	0.024	Human
regulation of circadian rhythm	GO:0042752	27	0.024
cellular carbohydrate metabolic process	GO:0044262	72	0.024
tissue morphogenesis	GO:0048729	22	0.024
regulation of alternative mrna splicing via spliceosome	GO:0000381	2	0.024
regulation of locomotion	GO:0040012	148	0.023
cellular response to cytokine stimulus	GO:0071345	127	0.023
renal system development	GO:0072001	67	0.023
organophosphate metabolic process	GO:0019637	370	0.023
response to nutrient	GO:0007584	248	0.023
growth	GO:0040007	165	0.023
neuron development	GO:0048666	286	0.023
regulation of mrna splicing via spliceosome	GO:0048024	3	0.023
organonitrogen compound biosynthetic process	GO:1901566	167	0.022
nitrogen compound transport	GO:0071705	229	0.022
negative regulation of transcription from rna polymerase ii promoter	GO:0000122	75	0.022
regulation of arp2 3 complex mediated actin nucleation	GO:0034315	2	0.022
lung development	GO:0030324	43	0.022
cell morphogenesis involved in differentiation	GO:0000904	119	0.022
regulation of mrna processing	GO:0050684	5	0.021
viral gene expression	GO:0019080	2	0.021
regulation of cell differentiation	GO:0045595	320	0.021
cell cycle checkpoint	GO:0000075	2	0.021
cellular ketone metabolic process	GO:0042180	51	0.021
striated muscle cell development	GO:0055002	26	0.021
dna metabolic process	GO:0006259	96	0.021
positive regulation of molecular function	GO:0044093	230	0.021
cellular response to extracellular stimulus	GO:0031668	73	0.021
positive regulation of biosynthetic process	GO:0009891	319	0.020
regulation of endocytosis	GO:0030100	42	0.020
small molecule biosynthetic process	GO:0044283	124	0.020
response to extracellular stimulus	GO:0009991	380	0.020
cytoplasmic transport	GO:0016482	115	0.020
endocytosis	GO:0006897	84	0.020
localization of cell	GO:0051674	202	0.020
negative regulation of transcription dna templated	GO:0045892	116	0.020
cellular homeostasis	GO:0019725	252	0.019
positive regulation of cellular amine metabolic process	GO:0033240	3	0.019
protein transport	GO:0015031	132	0.019
positive regulation of transcription from rna polymerase ii promoter	GO:0045944	148	0.019
taxis	GO:0042330	67	0.019
ion homeostasis	GO:0050801	212	0.019
positive regulation of cell differentiation	GO:0045597	217	0.019
response to peptide hormone	GO:0043434	278	0.018
protein localization	GO:0008104	191	0.018
rna processing	GO:0006396	22	0.018	Human
organophosphate biosynthetic process	GO:0090407	143	0.018
protein oligomerization	GO:0051259	191	0.018
negative regulation of rna biosynthetic process	GO:1902679	118	0.018
response to oxygen levels	GO:0070482	265	0.018
homeostatic process	GO:0042592	331	0.018
dna integrity checkpoint	GO:0031570	2	0.018
regulation of protein metabolic process	GO:0051246	289	0.018
ribonucleoside metabolic process	GO:0009119	174	0.018
cellular nitrogen compound catabolic process	GO:0044270	163	0.017
rna splicing via transesterification reactions	GO:0000375	7	0.017	Human
negative regulation of apoptotic process	GO:0043066	181	0.017
axis specification	GO:0009798	4	0.017
respiratory system development	GO:0060541	45	0.017
protein localization to organelle	GO:0033365	57	0.017
carbohydrate biosynthetic process	GO:0016051	42	0.017
vasculature development	GO:0001944	70	0.017
spindle organization	GO:0007051	2	0.017
protein complex biogenesis	GO:0070271	263	0.017
chromatin assembly or disassembly	GO:0006333	1	0.017
positive regulation of cell migration	GO:0030335	96	0.017
positive regulation of protein oligomerization	GO:0032461	1	0.017
regulation of viral transcription	GO:0046782	2	0.017
positive regulation of multicellular organismal process	GO:0051240	387	0.016
regulation of catalytic activity	GO:0050790	304	0.016
hematopoietic progenitor cell differentiation	GO:0002244	2	0.016
regulation of synaptic transmission	GO:0050804	141	0.016
head development	GO:0060322	247	0.016
positive regulation of protein modification process	GO:0031401	142	0.016
spermatogenesis	GO:0007283	99	0.016
organic cyclic compound catabolic process	GO:1901361	175	0.016
cellular response to organonitrogen compound	GO:0071417	197	0.015
oxoacid metabolic process	GO:0043436	290	0.015
regulation of muscle organ development	GO:0048634	26	0.015
negative regulation of rna splicing	GO:0033119	3	0.015
cellular component movement	GO:0006928	248	0.015
regulation of anatomical structure size	GO:0090066	135	0.015
protein sumoylation	GO:0016925	4	0.015
rna localization	GO:0006403	4	0.015
positive regulation of cell proliferation	GO:0008284	249	0.015
regulation of cellular component biogenesis	GO:0044087	86	0.015
positive regulation of locomotion	GO:0040017	102	0.015
positive regulation of cellular component biogenesis	GO:0044089	55	0.014
liver development	GO:0001889	90	0.014
response to peptide	GO:1901652	292	0.014
regulation of cellular localization	GO:0060341	263	0.014
regulation of extrinsic apoptotic signaling pathway in absence of ligand	GO:2001239	5	0.014
positive regulation of cell development	GO:0010720	176	0.014
nucleobase containing small molecule metabolic process	GO:0055086	316	0.014
regulation of phosphate metabolic process	GO:0019220	349	0.014
polysaccharide biosynthetic process	GO:0000271	16	0.014
regulation of dendrite development	GO:0050773	59	0.014
atp dependent chromatin remodeling	GO:0043044	1	0.014
positive regulation of cellular component movement	GO:0051272	102	0.013
lipid metabolic process	GO:0006629	283	0.013
cell migration	GO:0016477	197	0.013
chromatin organization	GO:0006325	34	0.013
regulation of cellular catabolic process	GO:0031329	101	0.013
single organism catabolic process	GO:0044712	283	0.013
regulation of glucose metabolic process	GO:0010906	23	0.013
positive regulation of viral transcription	GO:0050434	2	0.013
single organism behavior	GO:0044708	130	0.013
cellular chemical homeostasis	GO:0055082	247	0.013
mrna 3 end processing	GO:0031124	1	0.013
respiratory tube development	GO:0030323	43	0.013
muscle organ development	GO:0007517	50	0.013
negative regulation of cell division	GO:0051782	1	0.013
blood vessel development	GO:0001568	69	0.013
embryonic pattern specification	GO:0009880	1	0.013
negative regulation of protein metabolic process	GO:0051248	114	0.013
regulation of canonical wnt signaling pathway	GO:0060828	4	0.013
positive regulation of cellular component organization	GO:0051130	200	0.013
negative regulation of cell cycle phase transition	GO:1901988	4	0.013
regulation of carbohydrate metabolic process	GO:0006109	41	0.012
protein dna complex disassembly	GO:0032986	1	0.012
regulation of generation of precursor metabolites and energy	GO:0043467	18	0.012
cellular process involved in reproduction in multicellular organism	GO:0022412	35	0.012
regulation of phosphorus metabolic process	GO:0051174	349	0.012
cellular metal ion homeostasis	GO:0006875	172	0.012
receptor mediated endocytosis	GO:0006898	42	0.012
sex differentiation	GO:0007548	113	0.012
male gamete generation	GO:0048232	99	0.012
regulation of glycogen biosynthetic process	GO:0005979	9	0.012
chromatin disassembly	GO:0031498	1	0.012
macromolecular complex assembly	GO:0065003	273	0.011	Human
regulation of meiotic cell cycle	GO:0051445	3	0.011
negative regulation of catalytic activity	GO:0043086	103	0.011
protein homooligomerization	GO:0051260	91	0.011
regulation of protein modification process	GO:0031399	194	0.011
regulation of phosphorylation	GO:0042325	248	0.011
single organism cellular localization	GO:1902580	102	0.011
maintenance of location	GO:0051235	17	0.011
macromolecule catabolic process	GO:0009057	58	0.011
response to radiation	GO:0009314	137	0.011
response to wounding	GO:0009611	254	0.011
rna splicing via transesterification reactions with bulged adenosine as nucleophile	GO:0000377	7	0.011	Human
axonogenesis	GO:0007409	71	0.011
response to ketone	GO:1901654	182	0.011
cellular response to peptide	GO:1901653	133	0.011
blood vessel morphogenesis	GO:0048514	58	0.011
response to insulin	GO:0032868	133	0.011
negative regulation of neuron death	GO:1901215	69	0.011
axon development	GO:0061564	96	0.011
cellular calcium ion homeostasis	GO:0006874	160	0.011
nucleosome organization	GO:0034728	1	0.011
regulation of neuron differentiation	GO:0045664	208	0.011
response to activity	GO:0014823	73	0.011
cell part morphogenesis	GO:0032990	123	0.011
protein maturation	GO:0051604	68	0.011
cellular lipid metabolic process	GO:0044255	208	0.011
myoblast fusion	GO:0007520	2	0.011
ribonucleoprotein complex assembly	GO:0022618	8	0.011	Human
receptor metabolic process	GO:0043112	18	0.011
positive regulation of protein metabolic process	GO:0051247	178	0.011
regulation of lipid metabolic process	GO:0019216	68	0.011
cellular response to lipid	GO:0071396	201	0.011
purine ribonucleoside metabolic process	GO:0046128	168	0.011
negative regulation of cell communication	GO:0010648	158	0.010
embryonic axis specification	GO:0000578	1	0.010
ossification	GO:0001503	70	0.010
regulation of carbohydrate biosynthetic process	GO:0043255	20	0.010
regulation of protein complex assembly	GO:0043254	33	0.010
response to hyperoxia	GO:0055093	45	0.010
actin nucleation	GO:0045010	2	0.010
negative regulation of developmental process	GO:0051093	125	0.010
ribonucleoprotein complex biogenesis	GO:0022613	10	0.010	Human
secretion	GO:0046903	307	0.010
cellular catabolic process	GO:0044248	295	0.010
response to decreased oxygen levels	GO:0036293	237	0.010
glucose metabolic process	GO:0006006	52	0.010
positive regulation of transport	GO:0051050	245	0.010
cytoskeleton dependent cytokinesis	GO:0061640	2	0.010
regeneration	GO:0031099	163	0.010
nucleobase containing compound catabolic process	GO:0034655	152	0.010

Snrpb disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease	DO term ID	Probability
organ system benign neoplasm	DOID:0060085	0.044
benign neoplasm	DOID:0060072	0.044
disease of cellular proliferation	DOID:14566	0.044
nervous system disease	DOID:863	0.021
central nervous system disease	DOID:331	0.021
disease of anatomical entity	DOID:7	0.021
cancer	DOID:162	0.020
organ system cancer	DOID:0050686	0.020
intestinal cancer	DOID:10155	0.012
gastrointestinal system cancer	DOID:3119	0.012
colorectal cancer	DOID:9256	0.012
colon carcinoma	DOID:1520	0.012
colon cancer	DOID:219	0.012
large intestine cancer	DOID:5672	0.012

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