Rattus norvegicus

42 known processes

Msx1

msh homeobox 1

Msx1 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
tissue developmentGO:00098882520.277
anatomical structure morphogenesisGO:00096532980.263
Human Fly
limb morphogenesisGO:003510840.250
Human
embryonic appendage morphogenesisGO:003511340.171
Human
rna metabolic processGO:00160704060.158
Rat
cellular component biogenesisGO:00440853680.154
regulation of multicellular organismal developmentGO:20000263760.143
embryonic limb morphogenesisGO:003032640.133
Human
rhythmic processGO:00485111560.127
reproductive processGO:00224143720.127
Fly
response to extracellular stimulusGO:00099913800.104
macromolecular complex assemblyGO:00650032730.095
multi organism reproductive processGO:00447032620.095
nucleic acid templated transcriptionGO:00976593790.093
Rat
macromolecular complex subunit organizationGO:00439333390.088
positive regulation of cellular biosynthetic processGO:00313282950.083
protein complex assemblyGO:00064612630.082
regulation of signal transductionGO:00099663180.080
Human
protein complex subunit organizationGO:00718223020.076
multicellular organism reproductionGO:00325042330.072
neuron differentiationGO:00301823680.070
positive regulation of gene expressionGO:00106282440.069
rna biosynthetic processGO:00327743800.069
Rat
response to woundingGO:00096112540.068
response to hypoxiaGO:00016662310.067
regulation of cell differentiationGO:00455953200.066
Fly
cellular component assemblyGO:00226073600.065
response to nutrient levelsGO:00316673700.065
protein oligomerizationGO:00512591910.064
response to retinoic acidGO:0032526630.064
positive regulation of cell differentiationGO:00455972170.064
regulation of rna biosynthetic processGO:20011413810.064
Rat
epithelium developmentGO:0060429960.063
regulation of programmed cell deathGO:00430673410.059
Human Rat
cellular response to lipidGO:00713962010.058
heart morphogenesisGO:000300730.057
cellular response to stressGO:00335542690.057
circadian rhythmGO:0007623880.055
neurological system processGO:00508772190.055
multi multicellular organism processGO:00447061380.054
protein complex biogenesisGO:00702712630.054
positive regulation of apoptotic processGO:00430651540.054
Human Rat
cellular response to external stimulusGO:00714961180.053
embryonic hindlimb morphogenesisGO:003511620.053
cellular response to oxygen containing compoundGO:19017013860.052
positive regulation of nitrogen compound metabolic processGO:00511733340.052
organic acid metabolic processGO:00060822920.052
single organism reproductive processGO:00447022970.052
Fly
positive regulation of macromolecule biosynthetic processGO:00105572470.051
negative regulation of multicellular organismal processGO:00512412030.051
positive regulation of rna metabolic processGO:00512542030.050
regulation of transcription dna templatedGO:00063553740.048
Rat
response to oxygen levelsGO:00704822650.048
regulation of cell developmentGO:00602842630.048
response to decreased oxygen levelsGO:00362932370.047
positive regulation of response to stimulusGO:00485842850.047
Human
multicellular organismal reproductive processGO:00486092330.047
biological adhesionGO:00226101100.047
response to inorganic substanceGO:00100353770.046
positive regulation of signalingGO:00230562700.045
Human
response to glucocorticoidGO:00513842230.045
blood circulationGO:00080151830.044
regulation of apoptotic processGO:00429813350.043
Human Rat
response to cytokineGO:00340972150.043
response to lipopolysaccharideGO:00324961910.043
reproductionGO:00000032450.043
organ morphogenesisGO:0009887750.043
Human Fly
female pregnancyGO:00075651220.043
positive regulation of signal transductionGO:00099671750.042
Human
negative regulation of rna biosynthetic processGO:19026791180.042
developmental process involved in reproductionGO:00030061590.042
Fly
regulation of cell proliferationGO:00421273590.041
response to estradiolGO:00323551640.041
growthGO:00400071650.041
Human
regulation of phosphate metabolic processGO:00192203490.041
head developmentGO:00603222470.040
positive regulation of phosphate metabolic processGO:00459372620.040
reproductive system developmentGO:00614581280.039
Fly
positive regulation of nucleobase containing compound metabolic processGO:00459353190.039
protein phosphorylationGO:00064683450.039
gland developmentGO:00487321550.038
response to bacteriumGO:00096172000.038
appendage morphogenesisGO:003510740.038
Human Fly
vascular process in circulatory systemGO:0003018960.037
cell projection organizationGO:00300303020.037
regulation of nucleic acid templated transcriptionGO:19035063800.037
Rat
limb developmentGO:006017350.037
Human
organonitrogen compound catabolic processGO:19015651790.037
organic substance catabolic processGO:19015753160.037
hindlimb morphogenesisGO:003513720.037
negative regulation of nucleic acid templated transcriptionGO:19035071170.037
defense responseGO:00069521940.037
transcription dna templatedGO:00063513770.036
Rat
nucleoside phosphate metabolic processGO:00067532830.036
response to mechanical stimulusGO:00096121340.035
neuron developmentGO:00486662860.035
negative regulation of developmental processGO:00510931250.035
chemotaxisGO:0006935660.035
response to biotic stimulusGO:00096072260.035
sex differentiationGO:00075481130.035
Fly
positive regulation of nucleic acid templated transcriptionGO:19035081970.034
negative regulation of macromolecule metabolic processGO:00106052600.034
Fly
negative regulation of cellular macromolecule biosynthetic processGO:20001131410.033
positive regulation of biosynthetic processGO:00098913190.033
positive regulation of rna biosynthetic processGO:19026801970.033
response to corticosteroidGO:00319602350.033
gastrulationGO:000736920.033
positive regulation of cell proliferationGO:00082842490.033
tissue morphogenesisGO:0048729220.033
regulation of molecular functionGO:00650093980.033
positive regulation of cell developmentGO:00107201760.033
sexual reproductionGO:00199531480.033
transcription from rna polymerase ii promoterGO:00063662520.033
Rat
prostate gland epithelium morphogenesisGO:006074020.033
positive regulation of cellular protein metabolic processGO:00322701670.032
positive regulation of phosphorylationGO:00423271770.032
positive regulation of programmed cell deathGO:00430681570.032
Human Rat
action potentialGO:0001508540.032
response to metal ionGO:00100382530.031
negative regulation of nitrogen compound metabolic processGO:00511721610.031
regulation of membrane potentialGO:00423911100.031
regulation of neuron differentiationGO:00456642080.031
cellular response to endogenous stimulusGO:00714953770.031
mesenchymal cell proliferationGO:001046340.031
response to indole 3 methanolGO:007168020.030
positive regulation of neurogenesisGO:00507691650.030
positive regulation of cell deathGO:00109421840.030
Human Rat
synaptic transmissionGO:00072682350.030
eye morphogenesisGO:004859240.030
multicellular organismal signalingGO:0035637440.029
response to transition metal nanoparticleGO:19902671220.029
catabolic processGO:00090563510.029
cellular amine metabolic processGO:0044106380.029
intracellular signal transductionGO:00355563140.029
Human
response to external biotic stimulusGO:00432072210.029
cardiovascular system developmentGO:00723581340.029
amine metabolic processGO:0009308380.029
oxoacid metabolic processGO:00434362900.029
transformation of host cell by virusGO:001908740.029
cellular catabolic processGO:00442482950.029
single organism behaviorGO:00447081300.029
response to acid chemicalGO:00011012220.029
circulatory system developmentGO:00723591340.028
cardiac chamber developmentGO:000320510.028
hormone metabolic processGO:0042445690.028
negative regulation of gene expressionGO:00106291990.028
Fly
programmed cell deathGO:00125013920.028
Human Rat
immune system processGO:00023762040.028
respiratory system developmentGO:0060541450.028
cellular response to low density lipoprotein particle stimulusGO:007140430.027
homeostatic processGO:00425923310.027
regenerationGO:00310991630.027
single organism biosynthetic processGO:00447113420.027
regulation of cellular amino acid metabolic processGO:000652120.027
regulation of protein metabolic processGO:00512462890.027
cellular homeostasisGO:00197252520.027
secretion by cellGO:00329402480.027
central nervous system developmentGO:00074173110.027
cytosolic calcium ion homeostasisGO:00514801400.027
positive regulation of nervous system developmentGO:00519621780.026
carboxylic acid metabolic processGO:00197522890.026
cellular response to acid chemicalGO:0071229750.026
regulation of cellular amine metabolic processGO:003323880.026
negative regulation of metabolic processGO:00098923310.026
Fly
negative regulation of rna metabolic processGO:00512531230.026
cellular response to growth factor stimulusGO:00713631620.026
cellular response to organic cyclic compoundGO:00714072020.026
organelle organizationGO:00069962660.025
calcium ion homeostasisGO:00550741620.025
macromolecule localizationGO:00330362520.025
Human
positive regulation of multicellular organismal processGO:00512403870.025
apoptotic processGO:00069153810.025
Human Rat
regulation of catalytic activityGO:00507903040.025
response to other organismGO:00517072200.024
anatomical structure formation involved in morphogenesisGO:0048646830.024
negative regulation of biosynthetic processGO:00098901680.024
ossificationGO:0001503700.024
Rat
regulation of rna metabolic processGO:00512523910.024
Rat
negative regulation of cell deathGO:00605482290.024
secretionGO:00469033070.024
regulation of cellular component organizationGO:00511283680.023
Human
vesicle mediated transportGO:00161921810.023
positive regulation of transcription from rna polymerase ii promoterGO:00459441480.023
response to ethanolGO:00454711620.023
negative regulation of cellular biosynthetic processGO:00313271610.023
taxisGO:0042330670.023
cellular amino acid metabolic processGO:00065201070.022
intracellular transportGO:00469071850.022
learning or memoryGO:0007611900.022
regulation of synaptic plasticityGO:0048167700.022
embryo developmentGO:0009790490.022
Human
organophosphate metabolic processGO:00196373700.022
response to peptide hormoneGO:00434342780.022
embryonic skeletal system developmentGO:004870630.022
negative regulation of cellular metabolic processGO:00313242810.022
circulatory system processGO:00030131830.022
prostate gland morphogenesisGO:006051220.022
positive regulation of cellular amino acid metabolic processGO:004576410.022
regulation of protein phosphorylationGO:00019321830.022
lipid metabolic processGO:00066292830.021
forebrain developmentGO:0030900980.021
cellular response to cytokine stimulusGO:00713451270.021
gamete generationGO:00072761240.021
axon developmentGO:0061564960.021
cellular response to nitrogen compoundGO:19016992100.021
regulation of neurogenesisGO:00507672470.021
heart developmentGO:0007507720.021
regulation of growthGO:00400081050.021
Human
protein localizationGO:00081041910.021
Human
multicellular organism growthGO:003526410.021
negative regulation of macromolecule biosynthetic processGO:00105581480.021
negative regulation of nucleobase containing compound metabolic processGO:00459341530.021
single organism catabolic processGO:00447122830.021
negative regulation of transcription dna templatedGO:00458921160.021
cellular response to organonitrogen compoundGO:00714171970.021
response to growth factorGO:00708481890.021
negative regulation of cell communicationGO:00106481580.021
positive regulation of cellular amine metabolic processGO:003324030.020
metal ion transportGO:00300012890.020
regulation of phosphorylationGO:00423252480.020
response to nutrientGO:00075842480.020
brain developmentGO:00074202470.020
cellular response to hormone stimulusGO:00328702470.020
proteolysisGO:00065081750.020
formation of primary germ layerGO:000170410.020
muscle organ developmentGO:0007517500.020
cartilage development involved in endochondral bone morphogenesisGO:006035130.020
cell migrationGO:00164771970.020
vasoconstrictionGO:0042310540.020
cellular response to nutrient levelsGO:0031669600.019
response to molecule of bacterial originGO:00022371940.019
positive regulation of cell communicationGO:00106472710.019
Human
positive regulation of catalytic activityGO:00430851840.019
regulation of cellular protein metabolic processGO:00322682670.019
regulation of tube sizeGO:0035150890.019
regulation of phosphorus metabolic processGO:00511743490.019
spermatogenesisGO:0007283990.019
neuron projection developmentGO:00311752730.019
behaviorGO:00076102050.019
positive regulation of developmental processGO:00510942830.019
regulation of blood vessel sizeGO:0050880890.018
cellular chemical homeostasisGO:00550822470.018
response to radiationGO:00093141370.018
regulation of cellular ketone metabolic processGO:0010565270.018
regulation of intracellular signal transductionGO:19025312180.018
Human
cellular response to extracellular stimulusGO:0031668730.018
muscle system processGO:00030121150.018
regulation of transcription from rna polymerase ii promoterGO:00063572340.018
Rat
ribose phosphate metabolic processGO:00196932350.018
cellular calcium ion homeostasisGO:00068741600.018
regulation of anatomical structure morphogenesisGO:00226031410.018
wound healingGO:00420601220.018
reproductive structure developmentGO:00486081280.017
Fly
cellular protein localizationGO:00346131220.017
Human
cellular ion homeostasisGO:00068731840.017
transmembrane receptor protein tyrosine kinase signaling pathwayGO:0007169850.017
regulation of stem cell differentiationGO:200073620.017
cell adhesionGO:00071551100.017
axis specificationGO:000979840.017
negative regulation of transcription from rna polymerase ii promoterGO:0000122750.017
muscle structure developmentGO:0061061870.017
regulation of cellular localizationGO:00603412630.017
purine nucleotide metabolic processGO:00061632290.017
response to high light intensityGO:000964410.017
male gamete generationGO:0048232990.017
negative regulation of apoptotic processGO:00430661810.017
positive regulation of molecular functionGO:00440932300.016
carbohydrate derivative catabolic processGO:19011361470.016
anterior posterior pattern specificationGO:000995210.016
regulation of hormone levelsGO:00108171870.016
neuron deathGO:00709971270.016
response to peptideGO:19016522920.016
response to hyperoxiaGO:0055093450.016
cellular macromolecule localizationGO:00707271220.016
Human
regulation of nervous system developmentGO:00519602640.016
negative regulation of cell proliferationGO:00082851190.016
purine ribonucleoside metabolic processGO:00461281680.016
cytoplasmic transportGO:00164821150.016
single organism organelle organizationGO:19025891800.016
development of primary sexual characteristicsGO:00451371070.016
positive regulation of transcription dna templatedGO:00458931970.015
positive regulation of protein phosphorylationGO:00019341350.015
chemosensory behaviorGO:000763520.015
negative regulation of signal transductionGO:0009968830.015
regulation of cell morphogenesisGO:0022604770.015
single organism membrane organizationGO:0044802740.015
cellular response to fluid shear stressGO:007149840.015
chemical homeostasisGO:00488782920.015
positive regulation of cell migrationGO:0030335960.015
connective tissue developmentGO:0061448330.015
nucleotide metabolic processGO:00091172790.015
response to reactive oxygen speciesGO:00003021200.015
cognitionGO:0050890920.015
regulation of hydrolase activityGO:00513361430.015
negative regulation of protein metabolic processGO:00512481140.015
ras protein signal transductionGO:0007265290.015
sensory organ developmentGO:0007423740.015
cell growthGO:00160491040.015
Human
nucleoside triphosphate catabolic processGO:00091431230.015
regulation of neuron projection developmentGO:00109751610.015
cell part morphogenesisGO:00329901230.015
cation transmembrane transportGO:00986552630.015
negative regulation of signalingGO:00230571570.015
cellular component morphogenesisGO:00329891550.015
Human
cellular response to retinoic acidGO:0071300270.015
protein heterooligomerizationGO:0051291890.015
purine containing compound catabolic processGO:00725231380.015
embryonic pattern specificationGO:000988010.014
tube developmentGO:0035295890.014
purine nucleoside catabolic processGO:00061521240.014
positive regulation of neuron projection developmentGO:0010976990.014
regulation of secretion by cellGO:19035302080.014
negative regulation of transportGO:00510511360.014
salivary gland developmentGO:000743130.014
cytoskeleton organizationGO:00070101110.014
establishment of protein localizationGO:00451841410.014
regulation of response to stressGO:00801341260.014
bmp signaling pathwayGO:003050940.014
developmental growthGO:00485891000.014
ribonucleotide metabolic processGO:00092592310.014
cell type specific apoptotic processGO:00972851340.014
positive regulation of neuron differentiationGO:00456661260.014
regulation of blood circulationGO:19035221100.014
striated muscle tissue developmentGO:0014706580.014
response to tumor necrosis factorGO:0034612560.014
regulation of synaptic transmissionGO:00508041410.014
regulation of epithelial cell proliferationGO:0050678490.014
cell cell signalingGO:00072673350.014
transmission of nerve impulseGO:0019226420.014
cellular carbohydrate metabolic processGO:0044262720.014
response to oxidative stressGO:00069791860.014
negative regulation of response to stimulusGO:00485851550.014
response to estrogenGO:00436272320.014
regulation of system processGO:00440572080.014
endocytosisGO:0006897840.013
blood vessel morphogenesisGO:0048514580.013
small gtpase mediated signal transductionGO:0007264360.013
endomembrane system organizationGO:0010256480.013
purine nucleotide catabolic processGO:00061951360.013
oxidation reduction processGO:00551143040.013
circadian sleep wake cycle processGO:0022410210.013
generation of precursor metabolites and energyGO:0006091620.013
positive regulation of protein metabolic processGO:00512471780.013
olfactory behaviorGO:004204820.013
rho protein signal transductionGO:0007266110.013
neuron fate commitmentGO:004866340.013
response to axon injuryGO:0048678590.013
enzyme linked receptor protein signaling pathwayGO:00071671160.013
gonad developmentGO:00084061040.013
cation transportGO:00068123820.013
response to increased oxygen levelsGO:0036296450.013
regulation of canonical wnt signaling pathwayGO:006082840.013
specification of organ identityGO:001009220.013
regulation of protein modification processGO:00313991940.013
cell motilityGO:00488702020.013
purine containing compound metabolic processGO:00725212530.013
mechanoreceptor differentiationGO:004249020.013
skeletal system developmentGO:0001501410.013
nucleoside phosphate catabolic processGO:19012921400.013
vasculature developmentGO:0001944700.013
regulation of cell growthGO:0001558850.012
Human
cell morphogenesisGO:00009021420.012
Human
hair cycleGO:004263330.012
nucleobase containing compound catabolic processGO:00346551520.012
embryonic axis specificationGO:000057810.012
cell morphogenesis involved in neuron differentiationGO:00486671060.012
protein transportGO:00150311320.012
purine nucleoside triphosphate catabolic processGO:00091461220.012
muscle tissue developmentGO:0060537580.012
cellular response to iron iii ionGO:007128330.012
embryonic skeletal system morphogenesisGO:004870430.012
divalent inorganic cation homeostasisGO:00725071650.012
mapk cascadeGO:00001651400.012
defecationGO:003042110.012
circadian sleep wake cycle sleepGO:0050802210.012
cellular ketone metabolic processGO:0042180510.012
epithelial cell differentiationGO:0030855710.012
regulation of anatomical structure sizeGO:00900661350.012
cellular cation homeostasisGO:00300031800.012
purine nucleoside triphosphate metabolic processGO:00091441410.011
carbohydrate derivative metabolic processGO:19011353460.011
regulation of defense responseGO:0031347680.011
regulation of circadian sleep wake cycleGO:0042749180.011
response to nicotineGO:0035094510.011
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathwayGO:009010120.011
regulation of cell motilityGO:20001451310.011
regulation of kinase activityGO:00435491170.011
response to low density lipoprotein particleGO:005509840.011
nucleoside triphosphate metabolic processGO:00091411440.011
osteoblast differentiationGO:0001649260.011
Rat
organic cyclic compound catabolic processGO:19013611750.011
diencephalon developmentGO:0021536210.011
female gonad developmentGO:0008585530.011
positive regulation of cytosolic calcium ion concentrationGO:00072041220.011
alcohol metabolic processGO:0006066770.011
positive regulation of cellular component organizationGO:00511302000.011
cell cell signaling involved in cell fate commitmentGO:004516820.011
acrosome assemblyGO:000167530.011
ribonucleoside catabolic processGO:00424541260.011
receptor mediated endocytosisGO:0006898420.011
positive regulation of synaptic plasticityGO:003191530.011
development of primary female sexual characteristicsGO:0046545560.011
skeletal system morphogenesisGO:0048705120.011
response to fluorideGO:190261730.011
intestinal absorptionGO:005089230.010
nucleoside metabolic processGO:00091161790.010
signal transduction by phosphorylationGO:00230141440.010
regulation of cytokine productionGO:0001817560.010
ribonucleotide catabolic processGO:00092611360.010
regulation of neuronal synaptic plasticityGO:0048168310.010
response to toxic substanceGO:00096361330.010
receptor internalizationGO:0031623140.010
organophosphate catabolic processGO:00464341480.010
cellular component movementGO:00069282480.010
monocarboxylic acid metabolic processGO:00327871520.010
cation homeostasisGO:00550801950.010
cell morphogenesis involved in differentiationGO:00009041190.010
heart processGO:0003015570.010
inner ear morphogenesisGO:004247210.010
regulation of secretionGO:00510462240.010
bone developmentGO:0060348250.010
negative regulation of cell differentiationGO:0045596990.010
regulation of notch signaling pathwayGO:000859330.010
adult locomotory behaviorGO:000834440.010
regulation of circadian sleep wake cycle sleepGO:0045187180.010

Msx1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.020
Human
musculoskeletal system diseaseDOID:1700.020
nervous system diseaseDOID:86300.016
cancerDOID:16200.011
disease of cellular proliferationDOID:1456600.011
organ system cancerDOID:005068600.011
connective tissue diseaseDOID:6500.011
bone diseaseDOID:008000100.011
bone development diseaseDOID:008000600.011