| organic acid metabolic process | GO:0006082 | 292 | 0.260 | |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.179 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.122 | |
| cofactor metabolic process | GO:0051186 | 95 | 0.067 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.054 | Rat |
| monocarboxylic acid metabolic process | GO:0032787 | 152 | 0.052 | |
| small molecule biosynthetic process | GO:0044283 | 124 | 0.043 | Rat |
| single organism biosynthetic process | GO:0044711 | 342 | 0.035 | Rat |
| cellular lipid metabolic process | GO:0044255 | 208 | 0.032 | Rat |
| lipid metabolic process | GO:0006629 | 283 | 0.028 | Rat |
| lipid oxidation | GO:0034440 | 30 | 0.027 | |
| organic hydroxy compound metabolic process | GO:1901615 | 115 | 0.027 | Rat |
| regulation of molecular function | GO:0065009 | 398 | 0.026 | |
| response to peptide | GO:1901652 | 292 | 0.025 | Rat |
| positive regulation of molecular function | GO:0044093 | 230 | 0.022 | |
| single organism reproductive process | GO:0044702 | 297 | 0.022 | Rat |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.021 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.020 | |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.020 | |
| regulation of catalytic activity | GO:0050790 | 304 | 0.020 | |
| oxidation reduction process | GO:0055114 | 304 | 0.019 | Rat |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.019 | |
| fatty acid metabolic process | GO:0006631 | 99 | 0.019 | |
| organophosphate metabolic process | GO:0019637 | 370 | 0.018 | |
| retinal metabolic process | GO:0042574 | 3 | 0.018 | Rat |
| response to nutrient levels | GO:0031667 | 370 | 0.018 | |
| positive regulation of catalytic activity | GO:0043085 | 184 | 0.018 | |
| aging | GO:0007568 | 241 | 0.017 | |
| regulation of phosphorus metabolic process | GO:0051174 | 349 | 0.017 | |
| response to extracellular stimulus | GO:0009991 | 380 | 0.016 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.016 | |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.016 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 316 | 0.016 | |
| regulation of hormone levels | GO:0010817 | 187 | 0.016 | Rat |
| carboxylic acid catabolic process | GO:0046395 | 49 | 0.015 | |
| negative regulation of transport | GO:0051051 | 136 | 0.015 | |
| negative regulation of cell communication | GO:0010648 | 158 | 0.015 | |
| regulation of intracellular signal transduction | GO:1902531 | 218 | 0.015 | Rat |
| regulation of cell differentiation | GO:0045595 | 320 | 0.015 | |
| response to metal ion | GO:0010038 | 253 | 0.015 | |
| organic acid biosynthetic process | GO:0016053 | 83 | 0.015 | |
| single organism catabolic process | GO:0044712 | 283 | 0.015 | |
| regulation of phosphorylation | GO:0042325 | 248 | 0.014 | |
| rna metabolic process | GO:0016070 | 406 | 0.014 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.014 | |
| regulation of cellular localization | GO:0060341 | 263 | 0.014 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 319 | 0.014 | |
| gland development | GO:0048732 | 155 | 0.014 | |
| organophosphate biosynthetic process | GO:0090407 | 143 | 0.014 | |
| nucleoside phosphate metabolic process | GO:0006753 | 283 | 0.014 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.014 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.013 | |
| rna biosynthetic process | GO:0032774 | 380 | 0.013 | |
| regulation of secretion by cell | GO:1903530 | 208 | 0.013 | |
| response to peptide hormone | GO:0043434 | 278 | 0.013 | |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.013 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 167 | 0.013 | |
| transcription dna templated | GO:0006351 | 377 | 0.013 | |
| cellular response to peptide | GO:1901653 | 133 | 0.013 | Rat |
| regulation of nucleic acid templated transcription | GO:1903506 | 380 | 0.013 | |
| intracellular signal transduction | GO:0035556 | 314 | 0.013 | Rat |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.013 | Rat |
| protein complex assembly | GO:0006461 | 263 | 0.012 | |
| axis specification | GO:0009798 | 4 | 0.012 | |
| cellular response to organic cyclic compound | GO:0071407 | 202 | 0.012 | |
| negative regulation of signaling | GO:0023057 | 157 | 0.012 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.012 | |
| lipid catabolic process | GO:0016042 | 46 | 0.012 | |
| liver development | GO:0001889 | 90 | 0.012 | |
| steroid metabolic process | GO:0008202 | 73 | 0.012 | Rat |
| dicarboxylic acid metabolic process | GO:0043648 | 42 | 0.012 | |
| protein oligomerization | GO:0051259 | 191 | 0.011 | |
| fatty acid catabolic process | GO:0009062 | 26 | 0.011 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.011 | |
| neuron differentiation | GO:0030182 | 368 | 0.011 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.011 | |
| cell projection organization | GO:0030030 | 302 | 0.011 | |
| positive regulation of phosphorylation | GO:0042327 | 177 | 0.011 | |
| cell morphogenesis | GO:0000902 | 142 | 0.011 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.011 | |
| protein phosphorylation | GO:0006468 | 345 | 0.011 | |
| alcohol metabolic process | GO:0006066 | 77 | 0.011 | Rat |
| secretion | GO:0046903 | 307 | 0.011 | |
| response to glucocorticoid | GO:0051384 | 223 | 0.011 | |
| cellular response to nitrogen compound | GO:1901699 | 210 | 0.011 | Rat |
| positive regulation of transcription dna templated | GO:0045893 | 197 | 0.011 | |
| response to nutrient | GO:0007584 | 248 | 0.011 | |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.011 | Rat |
| positive regulation of phosphorus metabolic process | GO:0010562 | 262 | 0.011 | |
| cellular component assembly | GO:0022607 | 360 | 0.010 | |
| positive regulation of protein metabolic process | GO:0051247 | 178 | 0.010 | |
| positive regulation of signaling | GO:0023056 | 270 | 0.010 | Rat |
| nucleotide metabolic process | GO:0009117 | 279 | 0.010 | |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.010 | |
| amide transport | GO:0042886 | 105 | 0.010 | |
| purine nucleotide metabolic process | GO:0006163 | 229 | 0.010 | |
| regulation of secretion | GO:0051046 | 224 | 0.010 | |
| purine containing compound metabolic process | GO:0072521 | 253 | 0.010 | |
| regulation of peptide secretion | GO:0002791 | 82 | 0.010 | |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.010 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.010 | |
