| intra golgi vesicle mediated transport | GO:0006891 | 3 | 0.239 | |
| toxin metabolic process | GO:0009404 | 9 | 0.153 | |
| golgi vesicle transport | GO:0048193 | 22 | 0.148 | Yeast |
| intracellular transport | GO:0046907 | 185 | 0.124 | Yeast |
| catabolic process | GO:0009056 | 351 | 0.116 | |
| regulation of molecular function | GO:0065009 | 398 | 0.098 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 141 | 0.094 | |
| organelle organization | GO:0006996 | 266 | 0.085 | Yeast |
| regulation of cellular component organization | GO:0051128 | 368 | 0.076 | |
| vesicle mediated transport | GO:0016192 | 181 | 0.066 | Yeast Fly |
| chromosome segregation | GO:0007059 | 2 | 0.064 | |
| single organism intracellular transport | GO:1902582 | 166 | 0.061 | Yeast |
| activation of phospholipase d activity | GO:0031584 | 2 | 0.060 | |
| purine nucleoside metabolic process | GO:0042278 | 169 | 0.059 | |
| regulation of catabolic process | GO:0009894 | 113 | 0.053 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 262 | 0.052 | |
| negative regulation of metabolic process | GO:0009892 | 331 | 0.051 | |
| cellular catabolic process | GO:0044248 | 295 | 0.049 | |
| aromatic compound catabolic process | GO:0019439 | 168 | 0.048 | |
| atp catabolic process | GO:0006200 | 54 | 0.048 | |
| protein phosphorylation | GO:0006468 | 345 | 0.045 | |
| purine nucleotide catabolic process | GO:0006195 | 136 | 0.043 | |
| ribonucleoside metabolic process | GO:0009119 | 174 | 0.040 | |
| heterocycle catabolic process | GO:0046700 | 167 | 0.040 | |
| organonitrogen compound catabolic process | GO:1901565 | 179 | 0.039 | |
| organic cyclic compound catabolic process | GO:1901361 | 175 | 0.037 | |
| receptor metabolic process | GO:0043112 | 18 | 0.036 | |
| synaptic transmission | GO:0007268 | 235 | 0.034 | |
| regulation of hydrolase activity | GO:0051336 | 143 | 0.034 | |
| cytoplasmic transport | GO:0016482 | 115 | 0.033 | Yeast |
| defense response | GO:0006952 | 194 | 0.033 | |
| purine containing compound catabolic process | GO:0072523 | 138 | 0.033 | |
| cellular response to stress | GO:0033554 | 269 | 0.031 | |
| single organism catabolic process | GO:0044712 | 283 | 0.031 | |
| protein localization to organelle | GO:0033365 | 57 | 0.031 | |
| regulation of catalytic activity | GO:0050790 | 304 | 0.031 | |
| cytoskeleton organization | GO:0007010 | 111 | 0.030 | |
| regulation of cellular protein metabolic process | GO:0032268 | 267 | 0.030 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 122 | 0.029 | |
| arp2 3 complex mediated actin nucleation | GO:0034314 | 2 | 0.029 | |
| organic substance catabolic process | GO:1901575 | 316 | 0.029 | |
| regulation of multicellular organismal development | GO:2000026 | 376 | 0.028 | |
| purine ribonucleoside catabolic process | GO:0046130 | 124 | 0.028 | |
| regulation of cellular catabolic process | GO:0031329 | 101 | 0.027 | |
| establishment of protein localization | GO:0045184 | 141 | 0.026 | Fly |
| purine nucleoside catabolic process | GO:0006152 | 124 | 0.026 | |
| response to nutrient levels | GO:0031667 | 370 | 0.026 | |
| neuron projection development | GO:0031175 | 273 | 0.026 | |
| er to golgi vesicle mediated transport | GO:0006888 | 10 | 0.026 | Yeast |
| purine ribonucleotide metabolic process | GO:0009150 | 227 | 0.026 | |
| homeostatic process | GO:0042592 | 331 | 0.025 | |
| nucleobase containing compound catabolic process | GO:0034655 | 152 | 0.024 | |
| secretion by cell | GO:0032940 | 248 | 0.024 | Fly |
| positive regulation of molecular function | GO:0044093 | 230 | 0.024 | |
| carbohydrate derivative catabolic process | GO:1901136 | 147 | 0.023 | |
| endoplasmic reticulum organization | GO:0007029 | 1 | 0.023 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 141 | 0.023 | |
| glycosyl compound metabolic process | GO:1901657 | 182 | 0.023 | |
| regulation of atpase activity | GO:0043462 | 7 | 0.022 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 55 | 0.022 | |
| membrane organization | GO:0061024 | 94 | 0.022 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 56 | 0.022 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 260 | 0.022 | |
| neuron development | GO:0048666 | 286 | 0.021 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 262 | 0.021 | |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.021 | |
| regulation of phosphate metabolic process | GO:0019220 | 349 | 0.021 | |
| cellular response to external stimulus | GO:0071496 | 118 | 0.020 | |
| multi organism reproductive process | GO:0044703 | 262 | 0.020 | |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.020 | |
| positive regulation of transport | GO:0051050 | 245 | 0.020 | |
| reproduction | GO:0000003 | 245 | 0.020 | |
| neuron differentiation | GO:0030182 | 368 | 0.019 | |
| single organism cellular localization | GO:1902580 | 102 | 0.019 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.019 | |
| purine ribonucleotide catabolic process | GO:0009154 | 136 | 0.019 | |
| regulation of neuron projection development | GO:0010975 | 161 | 0.019 | |
| regulation of protein modification process | GO:0031399 | 194 | 0.019 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 319 | 0.018 | |
| anatomical structure morphogenesis | GO:0009653 | 298 | 0.018 | Fly |
| cell morphogenesis | GO:0000902 | 142 | 0.018 | |
| chemical homeostasis | GO:0048878 | 292 | 0.018 | |
| regulation of membrane potential | GO:0042391 | 110 | 0.018 | |
| cell cell signaling | GO:0007267 | 335 | 0.018 | |
| retrograde vesicle mediated transport golgi to er | GO:0006890 | 1 | 0.017 | Yeast |
| protein complex biogenesis | GO:0070271 | 263 | 0.017 | |
| regulation of cell proliferation | GO:0042127 | 359 | 0.017 | |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.017 | |
| negative regulation of molecular function | GO:0044092 | 133 | 0.017 | |
| protein complex subunit organization | GO:0071822 | 302 | 0.017 | |
| rna metabolic process | GO:0016070 | 406 | 0.017 | |
| purine containing compound metabolic process | GO:0072521 | 253 | 0.016 | |
| cellular component assembly | GO:0022607 | 360 | 0.016 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 93 | 0.016 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 163 | 0.016 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 84 | 0.016 | |
| regulation of ion transport | GO:0043269 | 245 | 0.016 | |
| neuromuscular synaptic transmission | GO:0007274 | 2 | 0.016 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.015 | |
| dendritic spine organization | GO:0097061 | 12 | 0.015 | |
| positive regulation of cellular component organization | GO:0051130 | 200 | 0.015 | |
| endosomal transport | GO:0016197 | 14 | 0.015 | |
| eye morphogenesis | GO:0048592 | 4 | 0.015 | |
| positive regulation of nucleotide metabolic process | GO:0045981 | 91 | 0.015 | |
| amine metabolic process | GO:0009308 | 38 | 0.015 | |
| response to toxic substance | GO:0009636 | 133 | 0.015 | |
| regulation of protein localization | GO:0032880 | 81 | 0.015 | |
| cellular component morphogenesis | GO:0032989 | 155 | 0.015 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 123 | 0.015 | |
| purine nucleotide metabolic process | GO:0006163 | 229 | 0.014 | |
| cellular macromolecular complex assembly | GO:0034622 | 58 | 0.014 | |
| positive regulation of hydrolase activity | GO:0051345 | 86 | 0.014 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 55 | 0.014 | |
| nuclear transport | GO:0051169 | 49 | 0.014 | |
| endoplasmic reticulum membrane organization | GO:0090158 | 1 | 0.014 | |
| single organism membrane organization | GO:0044802 | 74 | 0.014 | |
| negative regulation of gene expression | GO:0010629 | 199 | 0.014 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.014 | |
| regulation of nervous system development | GO:0051960 | 264 | 0.014 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 55 | 0.014 | |
| nucleoside metabolic process | GO:0009116 | 179 | 0.014 | |
| signal release | GO:0023061 | 145 | 0.014 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.013 | |
| macromolecule localization | GO:0033036 | 252 | 0.013 | Fly |
| glycosyl compound catabolic process | GO:1901658 | 126 | 0.013 | |
| cellular component movement | GO:0006928 | 248 | 0.013 | |
| organophosphate catabolic process | GO:0046434 | 148 | 0.013 | |
| asymmetric protein localization | GO:0008105 | 2 | 0.013 | |
| cellular modified amino acid catabolic process | GO:0042219 | 1 | 0.013 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 316 | 0.013 | |
| organic acid metabolic process | GO:0006082 | 292 | 0.013 | |
| actin nucleation | GO:0045010 | 2 | 0.013 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 115 | 0.012 | |
| cation transport | GO:0006812 | 382 | 0.012 | |
| positive regulation of catabolic process | GO:0009896 | 78 | 0.012 | |
| intracellular signal transduction | GO:0035556 | 314 | 0.012 | |
| negative regulation of protein modification by small protein conjugation or removal | GO:1903321 | 4 | 0.012 | |
| regulation of system process | GO:0044057 | 208 | 0.012 | |
| nucleoside phosphate catabolic process | GO:1901292 | 140 | 0.012 | |
| nucleoside catabolic process | GO:0009164 | 126 | 0.012 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.012 | |
| ribonucleotide metabolic process | GO:0009259 | 231 | 0.012 | |
| positive regulation of multicellular organismal process | GO:0051240 | 387 | 0.012 | |
| single organism reproductive process | GO:0044702 | 297 | 0.012 | |
| alpha amino acid metabolic process | GO:1901605 | 71 | 0.012 | |
| cellular metal ion homeostasis | GO:0006875 | 172 | 0.012 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 122 | 0.012 | |
| cellular protein localization | GO:0034613 | 122 | 0.012 | |
| detection of chemical stimulus involved in sensory perception of bitter taste | GO:0001580 | 4 | 0.011 | |
| rab protein signal transduction | GO:0032482 | 1 | 0.011 | |
| regulation of neurogenesis | GO:0050767 | 247 | 0.011 | |
| response to extracellular stimulus | GO:0009991 | 380 | 0.011 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.011 | |
| central nervous system development | GO:0007417 | 311 | 0.011 | |
| protein complex assembly | GO:0006461 | 263 | 0.011 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.011 | |
| nucleotide metabolic process | GO:0009117 | 279 | 0.011 | |
| cellular chemical homeostasis | GO:0055082 | 247 | 0.011 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 144 | 0.011 | |
| regulation of cellular localization | GO:0060341 | 263 | 0.011 | |
| positive regulation of catalytic activity | GO:0043085 | 184 | 0.011 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 88 | 0.011 | |
| exocytosis | GO:0006887 | 60 | 0.011 | |
| head development | GO:0060322 | 247 | 0.011 | |
| organophosphate metabolic process | GO:0019637 | 370 | 0.011 | |
| ion homeostasis | GO:0050801 | 212 | 0.011 | |
| brain development | GO:0007420 | 247 | 0.010 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 91 | 0.010 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.010 | |
| regulation of arp2 3 complex mediated actin nucleation | GO:0034315 | 2 | 0.010 | |
| rna localization | GO:0006403 | 4 | 0.010 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 140 | 0.010 | |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.010 | |
