| regulation of rna metabolic process | GO:0051252 | 391 | 0.259 | |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.134 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.123 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 380 | 0.115 | |
| rna metabolic process | GO:0016070 | 406 | 0.108 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 252 | 0.106 | |
| negative regulation of rna metabolic process | GO:0051253 | 123 | 0.099 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 234 | 0.085 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 260 | 0.072 | |
| transcription dna templated | GO:0006351 | 377 | 0.068 | |
| macromolecule localization | GO:0033036 | 252 | 0.068 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 153 | 0.062 | |
| rna biosynthetic process | GO:0032774 | 380 | 0.060 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 118 | 0.060 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 247 | 0.057 | |
| multicellular organism reproduction | GO:0032504 | 233 | 0.056 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 161 | 0.052 | |
| regulation of cellular component organization | GO:0051128 | 368 | 0.051 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 319 | 0.050 | |
| positive regulation of rna metabolic process | GO:0051254 | 203 | 0.049 | |
| positive regulation of gene expression | GO:0010628 | 244 | 0.049 | |
| protein phosphorylation | GO:0006468 | 345 | 0.045 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.045 | |
| cellular component assembly | GO:0022607 | 360 | 0.045 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.044 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.042 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.041 | |
| protein oligomerization | GO:0051259 | 191 | 0.039 | |
| protein complex subunit organization | GO:0071822 | 302 | 0.039 | |
| negative regulation of transcription dna templated | GO:0045892 | 116 | 0.039 | |
| regulation of cell proliferation | GO:0042127 | 359 | 0.038 | |
| cell morphogenesis involved in differentiation | GO:0000904 | 119 | 0.035 | |
| negative regulation of cellular metabolic process | GO:0031324 | 281 | 0.034 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 75 | 0.033 | |
| cellular component morphogenesis | GO:0032989 | 155 | 0.032 | |
| positive regulation of transcription dna templated | GO:0045893 | 197 | 0.031 | |
| negative regulation of biosynthetic process | GO:0009890 | 168 | 0.031 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 141 | 0.031 | |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.030 | |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.029 | |
| negative regulation of metabolic process | GO:0009892 | 331 | 0.029 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 148 | 0.029 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.029 | |
| axis specification | GO:0009798 | 4 | 0.028 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 197 | 0.028 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.027 | |
| negative regulation of gene expression | GO:0010629 | 199 | 0.027 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.025 | |
| positive regulation of protein metabolic process | GO:0051247 | 178 | 0.024 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 197 | 0.024 | |
| reproduction | GO:0000003 | 245 | 0.024 | |
| neuron differentiation | GO:0030182 | 368 | 0.023 | |
| single organism reproductive process | GO:0044702 | 297 | 0.023 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.023 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.023 | |
| single organism biosynthetic process | GO:0044711 | 342 | 0.022 | |
| regulation of protein modification process | GO:0031399 | 194 | 0.022 | |
| neuron projection development | GO:0031175 | 273 | 0.021 | |
| reproductive process | GO:0022414 | 372 | 0.020 | |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.020 | |
| positive regulation of response to stimulus | GO:0048584 | 285 | 0.020 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 167 | 0.020 | |
| regulation of multicellular organismal development | GO:2000026 | 376 | 0.020 | |
| anatomical structure morphogenesis | GO:0009653 | 298 | 0.020 | |
| regulation of molecular function | GO:0065009 | 398 | 0.020 | |
| multi organism reproductive process | GO:0044703 | 262 | 0.020 | |
| cellular response to cytokine stimulus | GO:0071345 | 127 | 0.019 | |
| protein complex biogenesis | GO:0070271 | 263 | 0.019 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 1 | 0.019 | |
| positive regulation of molecular function | GO:0044093 | 230 | 0.019 | |
| cell projection organization | GO:0030030 | 302 | 0.019 | |
| positive regulation of protein modification process | GO:0031401 | 142 | 0.019 | |
| protein localization | GO:0008104 | 191 | 0.018 | |
| homeostatic process | GO:0042592 | 331 | 0.018 | |
| multicellular organism growth | GO:0035264 | 1 | 0.018 | |
| amine metabolic process | GO:0009308 | 38 | 0.018 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 148 | 0.018 | |
| regulation of programmed cell death | GO:0043067 | 341 | 0.018 | |
| cellular component movement | GO:0006928 | 248 | 0.018 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.017 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.017 | |
| regulation of protein metabolic process | GO:0051246 | 289 | 0.017 | |
| cellular catabolic process | GO:0044248 | 295 | 0.017 | |
| ras protein signal transduction | GO:0007265 | 29 | 0.017 | |
| cellular response to stress | GO:0033554 | 269 | 0.017 | |
| organelle organization | GO:0006996 | 266 | 0.017 | |
| regulation of neurogenesis | GO:0050767 | 247 | 0.016 | |
| cellular homeostasis | GO:0019725 | 252 | 0.016 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 2 | 0.016 | |
| cytoskeleton organization | GO:0007010 | 111 | 0.016 | |
| embryonic pattern specification | GO:0009880 | 1 | 0.016 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.016 | |
| small gtpase mediated signal transduction | GO:0007264 | 36 | 0.016 | |
| neuron development | GO:0048666 | 286 | 0.016 | |
| protein complex assembly | GO:0006461 | 263 | 0.016 | |
| single organism organelle organization | GO:1902589 | 180 | 0.016 | |
| regulation of phosphorylation | GO:0042325 | 248 | 0.016 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 138 | 0.015 | |
| growth | GO:0040007 | 165 | 0.015 | |
| regulation of cell development | GO:0060284 | 263 | 0.015 | |
| positive regulation of nervous system development | GO:0051962 | 178 | 0.015 | |
| gastrulation | GO:0007369 | 2 | 0.015 | |
| inorganic cation transmembrane transport | GO:0098662 | 202 | 0.015 | |
| positive regulation of signaling | GO:0023056 | 270 | 0.015 | |
| spindle organization | GO:0007051 | 2 | 0.015 | |
| regulation of cellular protein metabolic process | GO:0032268 | 267 | 0.014 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 3 | 0.014 | |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.014 | |
| cell morphogenesis | GO:0000902 | 142 | 0.014 | |
| cell cycle checkpoint | GO:0000075 | 2 | 0.014 | |
| embryonic axis specification | GO:0000578 | 1 | 0.014 | |
| positive regulation of apoptotic process | GO:0043065 | 154 | 0.014 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 4 | 0.014 | |
| gamete generation | GO:0007276 | 124 | 0.014 | |
| response to decreased oxygen levels | GO:0036293 | 237 | 0.014 | |
| response to other organism | GO:0051707 | 220 | 0.014 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 117 | 0.013 | |
| regulation of meiotic cell cycle | GO:0051445 | 3 | 0.013 | |
| rhythmic process | GO:0048511 | 156 | 0.013 | |
| heart morphogenesis | GO:0003007 | 3 | 0.013 | |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.013 | |
| programmed cell death | GO:0012501 | 392 | 0.013 | |
| immune system process | GO:0002376 | 204 | 0.013 | |
| nucleotide metabolic process | GO:0009117 | 279 | 0.013 | |
| intracellular signal transduction | GO:0035556 | 314 | 0.013 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.013 | |
| cellular chemical homeostasis | GO:0055082 | 247 | 0.013 | |
| response to growth factor | GO:0070848 | 189 | 0.013 | |
| regulation of nervous system development | GO:0051960 | 264 | 0.012 | |
| actin filament based process | GO:0030029 | 86 | 0.012 | |
| regulation of cell projection organization | GO:0031344 | 175 | 0.012 | |
| organic acid metabolic process | GO:0006082 | 292 | 0.012 | |
| nucleoside phosphate metabolic process | GO:0006753 | 283 | 0.012 | |
| response to radiation | GO:0009314 | 137 | 0.012 | |
| regulation of organelle organization | GO:0033043 | 80 | 0.012 | |
| positive regulation of cell communication | GO:0010647 | 271 | 0.012 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.012 | |
| regulation of catabolic process | GO:0009894 | 113 | 0.012 | |
| regulation of cell motility | GO:2000145 | 131 | 0.012 | |
| protein heterooligomerization | GO:0051291 | 89 | 0.012 | |
| regulation of phosphate metabolic process | GO:0019220 | 349 | 0.012 | |
| chemical homeostasis | GO:0048878 | 292 | 0.012 | |
| positive regulation of cell death | GO:0010942 | 184 | 0.012 | |
| positive regulation of cell development | GO:0010720 | 176 | 0.012 | |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.012 | |
| response to nutrient levels | GO:0031667 | 370 | 0.012 | |
| cellular response to growth factor stimulus | GO:0071363 | 162 | 0.012 | |
| nucleobase containing compound catabolic process | GO:0034655 | 152 | 0.012 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 161 | 0.011 | |
| positive regulation of cell proliferation | GO:0008284 | 249 | 0.011 | |
| organic cyclic compound catabolic process | GO:1901361 | 175 | 0.011 | |
| protein autophosphorylation | GO:0046777 | 66 | 0.011 | |
| response to oxygen levels | GO:0070482 | 265 | 0.011 | |
| cell type specific apoptotic process | GO:0097285 | 134 | 0.011 | |
| positive regulation of neurogenesis | GO:0050769 | 165 | 0.011 | |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.011 | |
| regulation of cellular catabolic process | GO:0031329 | 101 | 0.011 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.011 | |
| positive regulation of developmental process | GO:0051094 | 283 | 0.010 | |
| cell projection morphogenesis | GO:0048858 | 123 | 0.010 | |
| response to metal ion | GO:0010038 | 253 | 0.010 | |
| nuclear transport | GO:0051169 | 49 | 0.010 | |
| positive regulation of catalytic activity | GO:0043085 | 184 | 0.010 | |
| organonitrogen compound catabolic process | GO:1901565 | 179 | 0.010 | |
| regulation of locomotion | GO:0040012 | 148 | 0.010 | |
| response to carbohydrate | GO:0009743 | 183 | 0.010 | |
| positive regulation of transferase activity | GO:0051347 | 81 | 0.010 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 262 | 0.010 | |
| positive regulation of cell differentiation | GO:0045597 | 217 | 0.010 | |
| neural crest cell differentiation | GO:0014033 | 2 | 0.010 | |
| catabolic process | GO:0009056 | 351 | 0.010 | |
| response to monosaccharide | GO:0034284 | 159 | 0.010 | |
| guanosine containing compound metabolic process | GO:1901068 | 74 | 0.010 | |
