| carboxylic acid metabolic process | GO:0019752 | 289 | 0.454 | |
| cofactor metabolic process | GO:0051186 | 95 | 0.365 | |
| acyl coa metabolic process | GO:0006637 | 28 | 0.336 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.326 | |
| organic acid metabolic process | GO:0006082 | 292 | 0.305 | |
| branched chain amino acid metabolic process | GO:0009081 | 4 | 0.262 | |
| branched chain amino acid catabolic process | GO:0009083 | 4 | 0.230 | |
| cellular amino acid catabolic process | GO:0009063 | 21 | 0.199 | |
| fatty acid beta oxidation | GO:0006635 | 22 | 0.181 | |
| carboxylic acid catabolic process | GO:0046395 | 49 | 0.147 | |
| alpha amino acid catabolic process | GO:1901606 | 20 | 0.098 | |
| response to nutrient levels | GO:0031667 | 370 | 0.081 | |
| small molecule catabolic process | GO:0044282 | 59 | 0.072 | |
| lipid metabolic process | GO:0006629 | 283 | 0.066 | |
| response to extracellular stimulus | GO:0009991 | 380 | 0.053 | |
| monocarboxylic acid metabolic process | GO:0032787 | 152 | 0.049 | |
| sulfur compound biosynthetic process | GO:0044272 | 19 | 0.049 | |
| sulfur compound metabolic process | GO:0006790 | 70 | 0.049 | |
| monocarboxylic acid catabolic process | GO:0072329 | 28 | 0.048 | |
| thioester metabolic process | GO:0035383 | 28 | 0.044 | |
| organic substance catabolic process | GO:1901575 | 316 | 0.043 | |
| response to nutrient | GO:0007584 | 248 | 0.043 | |
| tricarboxylic acid metabolic process | GO:0072350 | 10 | 0.043 | |
| fatty acid oxidation | GO:0019395 | 29 | 0.042 | |
| dicarboxylic acid metabolic process | GO:0043648 | 42 | 0.041 | |
| fatty acid metabolic process | GO:0006631 | 99 | 0.041 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.038 | |
| single organism catabolic process | GO:0044712 | 283 | 0.038 | |
| gland development | GO:0048732 | 155 | 0.031 | |
| organic acid catabolic process | GO:0016054 | 49 | 0.027 | |
| organonitrogen compound catabolic process | GO:1901565 | 179 | 0.027 | |
| glycosyl compound metabolic process | GO:1901657 | 182 | 0.027 | |
| alpha amino acid metabolic process | GO:1901605 | 71 | 0.027 | |
| programmed cell death | GO:0012501 | 392 | 0.025 | |
| cellular response to stress | GO:0033554 | 269 | 0.024 | |
| response to temperature stimulus | GO:0009266 | 94 | 0.024 | |
| cellular catabolic process | GO:0044248 | 295 | 0.023 | |
| catabolic process | GO:0009056 | 351 | 0.023 | |
| oxidation reduction process | GO:0055114 | 304 | 0.023 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.022 | |
| coenzyme metabolic process | GO:0006732 | 86 | 0.022 | |
| response to transition metal nanoparticle | GO:1990267 | 122 | 0.022 | |
| amine metabolic process | GO:0009308 | 38 | 0.022 | |
| positive regulation of cell proliferation | GO:0008284 | 249 | 0.021 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.021 | |
| valine metabolic process | GO:0006573 | 1 | 0.021 | |
| response to decreased oxygen levels | GO:0036293 | 237 | 0.020 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.020 | |
| protein tetramerization | GO:0051262 | 38 | 0.020 | |
| response to oxygen levels | GO:0070482 | 265 | 0.020 | |
| single organism reproductive process | GO:0044702 | 297 | 0.019 | |
| reactive oxygen species metabolic process | GO:0072593 | 37 | 0.019 | |
| citrate metabolic process | GO:0006101 | 3 | 0.018 | |
| negative regulation of programmed cell death | GO:0043069 | 183 | 0.018 | |
| reproductive process | GO:0022414 | 372 | 0.018 | |
| hepaticobiliary system development | GO:0061008 | 90 | 0.017 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.017 | |
| regulation of programmed cell death | GO:0043067 | 341 | 0.017 | |
| generation of precursor metabolites and energy | GO:0006091 | 62 | 0.016 | |
| negative regulation of cell death | GO:0060548 | 229 | 0.016 | |
| liver development | GO:0001889 | 90 | 0.016 | |
| response to hypoxia | GO:0001666 | 231 | 0.016 | |
| apoptotic process | GO:0006915 | 381 | 0.016 | |
| alpha amino acid biosynthetic process | GO:1901607 | 23 | 0.016 | |
| pyrimidine nucleobase catabolic process | GO:0006208 | 3 | 0.015 | |
| regulation of nervous system development | GO:0051960 | 264 | 0.015 | |
| metanephric epithelium development | GO:0072207 | 4 | 0.015 | |
| acetyl coa metabolic process | GO:0006084 | 17 | 0.015 | |
| response to inorganic substance | GO:0010035 | 377 | 0.015 | |
| negative regulation of apoptotic process | GO:0043066 | 181 | 0.014 | |
| development of primary sexual characteristics | GO:0045137 | 107 | 0.014 | |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.014 | |
| response to acid chemical | GO:0001101 | 222 | 0.014 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.014 | |
| regulation of apoptotic process | GO:0042981 | 335 | 0.014 | |
| cold acclimation | GO:0009631 | 1 | 0.014 | |
| cellular component assembly | GO:0022607 | 360 | 0.014 | |
| protein oligomerization | GO:0051259 | 191 | 0.014 | |
| positive regulation of multicellular organismal process | GO:0051240 | 387 | 0.013 | |
| cellular lipid metabolic process | GO:0044255 | 208 | 0.013 | |
| regulation of multicellular organismal development | GO:2000026 | 376 | 0.013 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.013 | |
| regulation of cell development | GO:0060284 | 263 | 0.013 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.013 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 1 | 0.012 | |
| negative regulation of transport | GO:0051051 | 136 | 0.012 | |
| aerobic respiration | GO:0009060 | 13 | 0.012 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 316 | 0.012 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.012 | |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.012 | |
| regulation of phosphorylation | GO:0042325 | 248 | 0.012 | |
| response to estrogen | GO:0043627 | 232 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 253 | 0.012 | |
| response to toxic substance | GO:0009636 | 133 | 0.012 | |
| response to ethanol | GO:0045471 | 162 | 0.012 | |
| regulation of body fluid levels | GO:0050878 | 90 | 0.012 | |
| response to metal ion | GO:0010038 | 253 | 0.012 | |
| organelle organization | GO:0006996 | 266 | 0.012 | |
| peptidyl amino acid modification | GO:0018193 | 126 | 0.011 | |
| negative regulation of cell communication | GO:0010648 | 158 | 0.011 | |
| response to corticosteroid | GO:0031960 | 235 | 0.011 | |
| cellular response to organonitrogen compound | GO:0071417 | 197 | 0.011 | |
| cellular response to nitrogen compound | GO:1901699 | 210 | 0.011 | |
| lipid catabolic process | GO:0016042 | 46 | 0.011 | |
| sex differentiation | GO:0007548 | 113 | 0.011 | |
| gonad development | GO:0008406 | 104 | 0.011 | |
| cellular response to lipid | GO:0071396 | 201 | 0.011 | |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.011 | |
| response to glucocorticoid | GO:0051384 | 223 | 0.011 | |
| neuron differentiation | GO:0030182 | 368 | 0.011 | |
| fatty acid catabolic process | GO:0009062 | 26 | 0.011 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 167 | 0.011 | |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.010 | |
| regulation of cell proliferation | GO:0042127 | 359 | 0.010 | |
| chemical homeostasis | GO:0048878 | 292 | 0.010 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 80 | 0.010 | |
| cellular response to cytokine stimulus | GO:0071345 | 127 | 0.010 | |
| regulation of rna metabolic process | GO:0051252 | 391 | 0.010 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.010 | |
