| ubiquitin dependent protein catabolic process | GO:0006511 | 14 | 0.658 | Yeast |
| modification dependent macromolecule catabolic process | GO:0043632 | 14 | 0.602 | Yeast |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 19 | 0.550 | Yeast |
| protein catabolic process | GO:0030163 | 30 | 0.476 | Yeast |
| proteasomal protein catabolic process | GO:0010498 | 8 | 0.450 | Yeast |
| proteolysis | GO:0006508 | 175 | 0.397 | Yeast |
| catabolic process | GO:0009056 | 351 | 0.313 | Yeast |
| cellular protein catabolic process | GO:0044257 | 19 | 0.303 | Yeast |
| cellular macromolecule catabolic process | GO:0044265 | 29 | 0.292 | Yeast |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 7 | 0.287 | Yeast |
| aging | GO:0007568 | 241 | 0.280 | |
| macromolecule catabolic process | GO:0009057 | 58 | 0.246 | Yeast |
| modification dependent protein catabolic process | GO:0019941 | 14 | 0.222 | Yeast |
| organic substance catabolic process | GO:1901575 | 316 | 0.205 | Yeast |
| cellular catabolic process | GO:0044248 | 295 | 0.198 | Yeast |
| reproduction | GO:0000003 | 245 | 0.132 | |
| cellular response to stress | GO:0033554 | 269 | 0.132 | Fly |
| defense response | GO:0006952 | 194 | 0.117 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 3 | 0.083 | |
| multicellular organism reproduction | GO:0032504 | 233 | 0.075 | |
| purine containing compound metabolic process | GO:0072521 | 253 | 0.065 | |
| spliceosomal complex assembly | GO:0000245 | 2 | 0.059 | |
| nucleoside phosphate metabolic process | GO:0006753 | 283 | 0.058 | |
| response to ethanol | GO:0045471 | 162 | 0.047 | |
| intracellular transport | GO:0046907 | 185 | 0.040 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 316 | 0.039 | |
| reproductive process | GO:0022414 | 372 | 0.038 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.035 | |
| inflammatory response to antigenic stimulus | GO:0002437 | 18 | 0.034 | |
| ribonucleotide metabolic process | GO:0009259 | 231 | 0.033 | |
| response to peptide hormone | GO:0043434 | 278 | 0.033 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.031 | |
| regulation of system process | GO:0044057 | 208 | 0.030 | |
| macromolecule localization | GO:0033036 | 252 | 0.030 | |
| locomotion | GO:0040011 | 237 | 0.029 | |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.028 | |
| cellular protein complex assembly | GO:0043623 | 44 | 0.028 | |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.027 | |
| organophosphate metabolic process | GO:0019637 | 370 | 0.027 | |
| single organism reproductive process | GO:0044702 | 297 | 0.026 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.025 | |
| embryo development | GO:0009790 | 49 | 0.024 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.024 | |
| multi organism reproductive process | GO:0044703 | 262 | 0.023 | |
| neuron differentiation | GO:0030182 | 368 | 0.023 | |
| rna metabolic process | GO:0016070 | 406 | 0.023 | |
| regulation of immune response | GO:0050776 | 55 | 0.022 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.021 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 197 | 0.020 | |
| transcription dna templated | GO:0006351 | 377 | 0.020 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 234 | 0.020 | |
| protein complex biogenesis | GO:0070271 | 263 | 0.020 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 252 | 0.020 | |
| negative regulation of response to wounding | GO:1903035 | 23 | 0.019 | |
| regulation of response to external stimulus | GO:0032101 | 106 | 0.019 | |
| nucleotide metabolic process | GO:0009117 | 279 | 0.019 | |
| glycosyl compound metabolic process | GO:1901657 | 182 | 0.019 | |
| response to ketone | GO:1901654 | 182 | 0.019 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.018 | |
| neuron projection development | GO:0031175 | 273 | 0.018 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 148 | 0.018 | |
| reproductive structure development | GO:0048608 | 128 | 0.017 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 144 | 0.017 | |
| response to oxidative stress | GO:0006979 | 186 | 0.017 | |
| apoptotic process | GO:0006915 | 381 | 0.017 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 55 | 0.016 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.016 | |
| peptidyl cysteine modification | GO:0018198 | 2 | 0.016 | |
| positive regulation of gene expression | GO:0010628 | 244 | 0.016 | |
| protein deacylation | GO:0035601 | 10 | 0.015 | |
| positive regulation of rna metabolic process | GO:0051254 | 203 | 0.015 | |
| response to peptide | GO:1901652 | 292 | 0.015 | |
| inflammatory response | GO:0006954 | 150 | 0.015 | |
| purine nucleotide metabolic process | GO:0006163 | 229 | 0.015 | |
| organic acid metabolic process | GO:0006082 | 292 | 0.015 | |
| response to extracellular stimulus | GO:0009991 | 380 | 0.015 | |
| sex differentiation | GO:0007548 | 113 | 0.015 | |
| regulation of response to stress | GO:0080134 | 126 | 0.015 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 141 | 0.014 | |
| cellular amide metabolic process | GO:0043603 | 44 | 0.014 | |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.014 | |
| regulation of myeloid cell differentiation | GO:0045637 | 12 | 0.014 | |
| negative regulation of oxidoreductase activity | GO:0051354 | 4 | 0.014 | |
| maintenance of protein localization in organelle | GO:0072595 | 1 | 0.013 | |
| regulation of immune system process | GO:0002682 | 123 | 0.013 | |
| cellular component assembly | GO:0022607 | 360 | 0.013 | |
| positive regulation of dna templated transcription initiation | GO:2000144 | 3 | 0.013 | |
| cation transmembrane transport | GO:0098655 | 263 | 0.013 | |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.013 | |
| cation transport | GO:0006812 | 382 | 0.013 | |
| negative regulation of immune system process | GO:0002683 | 39 | 0.013 | |
| negative regulation of protein complex assembly | GO:0031333 | 11 | 0.013 | |
| post embryonic development | GO:0009791 | 6 | 0.012 | |
| glycosyl compound catabolic process | GO:1901658 | 126 | 0.012 | |
| protein complex assembly | GO:0006461 | 263 | 0.012 | |
| cytoplasmic transport | GO:0016482 | 115 | 0.012 | |
| response to wounding | GO:0009611 | 254 | 0.012 | |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.012 | |
| endocytic recycling | GO:0032456 | 2 | 0.012 | |
| protein autoubiquitination | GO:0051865 | 2 | 0.012 | |
| gonad development | GO:0008406 | 104 | 0.011 | |
| organophosphate ester transport | GO:0015748 | 10 | 0.011 | |
| meiotic cytokinesis | GO:0033206 | 1 | 0.011 | |
| ribonucleoside metabolic process | GO:0009119 | 174 | 0.011 | |
| regulation of defense response | GO:0031347 | 68 | 0.011 | |
| sexual reproduction | GO:0019953 | 148 | 0.011 | |
| regulation of response to reactive oxygen species | GO:1901031 | 3 | 0.011 | |
| positive regulation of cellular component organization | GO:0051130 | 200 | 0.011 | |
| negative regulation of neurotransmitter transport | GO:0051589 | 4 | 0.011 | |
| development of primary sexual characteristics | GO:0045137 | 107 | 0.010 | |
| positive regulation of gene expression epigenetic | GO:0045815 | 1 | 0.010 | |
| response to nutrient levels | GO:0031667 | 370 | 0.010 | |
| protein localization to cell surface | GO:0034394 | 1 | 0.010 | |
