Rattus norvegicus

36 known processes

Kdm5b

lysine (K)-specific demethylase 5B

(Aliases: RGD1565602,Jarid1b)

Kdm5b biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
regulation of rna biosynthetic processGO:20011413810.131
Mouse
transcription dna templatedGO:00063513770.130
Mouse
rna metabolic processGO:00160704060.100
Mouse
regulation of transcription dna templatedGO:00063553740.098
Mouse
positive regulation of nucleobase containing compound metabolic processGO:00459353190.084
rna biosynthetic processGO:00327743800.075
Mouse
positive regulation of nitrogen compound metabolic processGO:00511733340.075
transcription from rna polymerase ii promoterGO:00063662520.069
regulation of rna metabolic processGO:00512523910.064
Mouse
organic acid metabolic processGO:00060822920.064
negative regulation of macromolecule metabolic processGO:00106052600.059
Mouse
positive regulation of cellular biosynthetic processGO:00313282950.057
regulation of nucleic acid templated transcriptionGO:19035063800.053
Mouse
brain developmentGO:00074202470.051
regulation of multicellular organismal developmentGO:20000263760.049
response to nutrient levelsGO:00316673700.048
positive regulation of macromolecule biosynthetic processGO:00105572470.046
positive regulation of gene expressionGO:00106282440.045
negative regulation of multicellular organismal processGO:00512412030.045
positive regulation of cell communicationGO:00106472710.043
positive regulation of biosynthetic processGO:00098913190.043
positive regulation of transcription dna templatedGO:00458931970.042
positive regulation of rna metabolic processGO:00512542030.041
positive regulation of nucleic acid templated transcriptionGO:19035081970.040
positive regulation of rna biosynthetic processGO:19026801970.039
cellular ketone metabolic processGO:0042180510.039
central nervous system developmentGO:00074173110.039
oxoacid metabolic processGO:00434362900.038
response to extracellular stimulusGO:00099913800.037
head developmentGO:00603222470.037
cellular amino acid metabolic processGO:00065201070.037
organophosphate metabolic processGO:00196373700.036
positive regulation of signalingGO:00230562700.035
cell cell signalingGO:00072673350.034
nucleic acid templated transcriptionGO:00976593790.033
Mouse
carboxylic acid metabolic processGO:00197522890.031
multicellular organism reproductionGO:00325042330.031
Rat
positive regulation of developmental processGO:00510942830.031
negative regulation of metabolic processGO:00098923310.030
Mouse
response to nutrientGO:00075842480.030
cell projection organizationGO:00300303020.030
regulation of cell differentiationGO:00455953200.029
blood circulationGO:00080151830.029
regulation of protein metabolic processGO:00512462890.029
positive regulation of nervous system developmentGO:00519621780.029
cellular component morphogenesisGO:00329891550.028
regulation of cellular protein metabolic processGO:00322682670.028
negative regulation of gene expressionGO:00106291990.028
Mouse
positive regulation of cell differentiationGO:00455972170.028
nucleotide metabolic processGO:00091172790.028
catabolic processGO:00090563510.028
regulation of cell developmentGO:00602842630.028
regulation of catalytic activityGO:00507903040.028
cellular amine metabolic processGO:0044106380.026
regulation of cellular ketone metabolic processGO:0010565270.026
homeostatic processGO:00425923310.026
positive regulation of neurogenesisGO:00507691650.026
response to inorganic substanceGO:00100353770.026
regulation of neurogenesisGO:00507672470.025
regulation of cell motilityGO:20001451310.025
regulation of cellular amine metabolic processGO:003323880.025
nucleoside phosphate metabolic processGO:00067532830.025
gastrulationGO:000736920.025
positive regulation of cellular amine metabolic processGO:003324030.025
cellular component biogenesisGO:00440853680.025
cell morphogenesisGO:00009021420.024
protein phosphorylationGO:00064683450.024
macromolecular complex assemblyGO:00650032730.024
carbohydrate derivative metabolic processGO:19011353460.024
regulation of protein modification processGO:00313991940.024
single organism catabolic processGO:00447122830.024
cellular homeostasisGO:00197252520.023
regulation of cellular amino acid metabolic processGO:000652120.023
anterior posterior pattern specificationGO:000995210.023
macromolecular complex subunit organizationGO:00439333390.023
Mouse Rat
multicellular organismal reproductive processGO:00486092330.023
Rat
positive regulation of transcription from rna polymerase ii promoterGO:00459441480.023
cellular response to oxygen containing compoundGO:19017013860.023
protein oligomerizationGO:00512591910.022
intracellular transportGO:00469071850.022
regulation of transcription from rna polymerase ii promoterGO:00063572340.022
regulation of membrane potentialGO:00423911100.022
organelle organizationGO:00069962660.022
Mouse Rat
cellular response to endogenous stimulusGO:00714953770.022
neuron projection developmentGO:00311752730.022
apoptotic processGO:00069153810.021
neuron differentiationGO:00301823680.021
response to oxygen levelsGO:00704822650.021
muscle system processGO:00030121150.021
regulation of nervous system developmentGO:00519602640.021
positive regulation of multicellular organismal processGO:00512403870.021
heterocycle catabolic processGO:00467001670.021
amine metabolic processGO:0009308380.021
cellular response to nitrogen compoundGO:19016992100.021
organic cyclic compound catabolic processGO:19013611750.021
chemical homeostasisGO:00488782920.021
negative regulation of developmental processGO:00510931250.021
positive regulation of cell developmentGO:00107201760.021
positive regulation of phosphorus metabolic processGO:00105622620.020
regulation of phosphorylationGO:00423252480.020
purine ribonucleoside metabolic processGO:00461281680.020
organic substance catabolic processGO:19015753160.020
tissue developmentGO:00098882520.020
neural crest cell differentiationGO:001403320.020
neuromuscular synaptic transmissionGO:000727420.020
regulation of neuron differentiationGO:00456642080.020
positive regulation of cell proliferationGO:00082842490.019
cellular response to lipidGO:00713962010.019
telencephalon developmentGO:0021537620.019
multi organism reproductive processGO:00447032620.019
Rat
negative regulation of nervous system developmentGO:0051961790.019
protein complex biogenesisGO:00702712630.019
locomotionGO:00400112370.019
negative regulation of cell differentiationGO:0045596990.019
response to decreased oxygen levelsGO:00362932370.019
axis specificationGO:000979840.019
embryonic pattern specificationGO:000988010.019
ribonucleotide metabolic processGO:00092592310.018
regulation of phosphorus metabolic processGO:00511743490.018
negative regulation of cellular macromolecule biosynthetic processGO:20001131410.018
Mouse
positive regulation of cellular amino acid metabolic processGO:004576410.018
single organism carbohydrate metabolic processGO:00447231180.018
regulation of synaptic growth at neuromuscular junctionGO:000858210.018
cellular component assemblyGO:00226073600.018
negative regulation of cellular metabolic processGO:00313242810.018
Mouse
cellular catabolic processGO:00442482950.018
protein homooligomerizationGO:0051260910.018
action potentialGO:0001508540.018
synaptic transmissionGO:00072682350.018
organonitrogen compound catabolic processGO:19015651790.017
reproductive system developmentGO:00614581280.017
Rat
ribose phosphate metabolic processGO:00196932350.017
reproductive processGO:00224143720.017
Rat
single organism intracellular transportGO:19025821660.017
respiratory system developmentGO:0060541450.017
neurological system processGO:00508772190.017
nucleobase containing small molecule metabolic processGO:00550863160.017
response to carbohydrateGO:00097431830.017
neuronal action potentialGO:0019228350.017
carbohydrate metabolic processGO:00059751300.017
embryonic skeletal system developmentGO:004870630.017
developmental process involved in reproductionGO:00030061590.017
Rat
cell projection morphogenesisGO:00488581230.017
pallium developmentGO:0021543420.017
positive regulation of neuron differentiationGO:00456661260.016
cellular response to stressGO:00335542690.016
regulation of anatomical structure sizeGO:00900661350.016
reproductionGO:00000032450.016
Rat
divalent inorganic cation homeostasisGO:00725071650.016
mesoderm developmentGO:000749820.016
localization of cellGO:00516742020.016
synaptic growth at neuromuscular junctionGO:005112410.016
bmp signaling pathwayGO:003050940.016
single organism cellular localizationGO:19025801020.015
regulation of hormone levelsGO:00108171870.015
gland developmentGO:00487321550.015
neuron developmentGO:00486662860.015
sex differentiationGO:00075481130.015
Rat
regulation of protein phosphorylationGO:00019321830.015
response to estrogenGO:00436272320.015
single organism reproductive processGO:00447022970.015
Rat
negative regulation of cellular protein metabolic processGO:00322691060.015
regulation of locomotionGO:00400121480.015
regulation of transferase activityGO:00513381230.015
cell motilityGO:00488702020.015
eye morphogenesisGO:004859240.015
regulation of cell proliferationGO:00421273590.015
endocytosisGO:0006897840.015
circulatory system processGO:00030131830.014
response to hypoxiaGO:00016662310.014
carbohydrate derivative biosynthetic processGO:19011371240.014
negative regulation of nucleobase containing compound metabolic processGO:00459341530.014
Mouse
glycosyl compound catabolic processGO:19016581260.014
response to external biotic stimulusGO:00432072210.014
regulation of molecular functionGO:00650093980.014
protein complex assemblyGO:00064612630.014
purine containing compound metabolic processGO:00725212530.014
cellular response to growth factor stimulusGO:00713631620.014
cellular response to organic cyclic compoundGO:00714072020.014
formation of primary germ layerGO:000170410.014
anatomical structure morphogenesisGO:00096532980.014
rhythmic processGO:00485111560.014
purine ribonucleoside triphosphate metabolic processGO:00092051400.014
ribonucleoside metabolic processGO:00091191740.014
response to acid chemicalGO:00011012220.014
regulation of catabolic processGO:00098941130.014
protein heterooligomerizationGO:0051291890.014
negative regulation of protein metabolic processGO:00512481140.014
purine nucleoside metabolic processGO:00422781690.014
glycosyl compound metabolic processGO:19016571820.014
purine ribonucleotide catabolic processGO:00091541360.014
response to molecule of bacterial originGO:00022371940.014
regulation of signal transductionGO:00099663180.013
regulation of apoptotic processGO:00429813350.013
positive regulation of cellular protein metabolic processGO:00322701670.013
regulation of neuron projection developmentGO:00109751610.013
peptidyl amino acid modificationGO:00181931260.013
nucleoside metabolic processGO:00091161790.013
negative regulation of nucleic acid templated transcriptionGO:19035071170.013
Mouse
proteolysisGO:00065081750.013
nucleobase containing compound catabolic processGO:00346551520.013
single organism biosynthetic processGO:00447113420.013
regulation of canonical wnt signaling pathwayGO:006082840.013
cellular metal ion homeostasisGO:00068751720.013
regenerationGO:00310991630.013
protein complex subunit organizationGO:00718223020.013
response to peptideGO:19016522920.013
neural crest cell developmentGO:001403220.013
salivary gland developmentGO:000743130.013
multicellular organism growthGO:003526410.013
male sex differentiationGO:0046661640.013
Rat
purine ribonucleoside catabolic processGO:00461301240.013
purine nucleotide metabolic processGO:00061632290.013
response to mechanical stimulusGO:00096121340.012
reproductive structure developmentGO:00486081280.012
Rat
vesicle mediated transportGO:00161921810.012
aromatic compound catabolic processGO:00194391680.012
circulatory system developmentGO:00723591340.012
small gtpase mediated signal transductionGO:0007264360.012
cellular lipid metabolic processGO:00442552080.012
circadian regulation of gene expressionGO:003292230.012
lipid metabolic processGO:00066292830.012
regulation of programmed cell deathGO:00430673410.012
transmission of nerve impulseGO:0019226420.012
cellular ion homeostasisGO:00068731840.012
growthGO:00400071650.012
purine nucleoside monophosphate catabolic processGO:0009128550.012
positive regulation of signal transductionGO:00099671750.012
positive regulation of cellular component organizationGO:00511302000.012
alternative mrna splicing via spliceosomeGO:000038040.012
nucleoside monophosphate metabolic processGO:0009123930.012
response to monosaccharideGO:00342841590.012
tube developmentGO:0035295890.012
regulation of system processGO:00440572080.012
neuron projection morphogenesisGO:00488121220.012
regulation of muscle system processGO:0090257790.012
negative regulation of neurogenesisGO:0050768780.012
purine nucleoside triphosphate catabolic processGO:00091461220.012
reactive oxygen species metabolic processGO:0072593370.012
metal ion homeostasisGO:00550651860.012
multicellular organismal signalingGO:0035637440.012
positive regulation of catabolic processGO:0009896780.012
cellular component movementGO:00069282480.012
protein deubiquitinationGO:001657940.011
ras protein signal transductionGO:0007265290.011
programmed cell deathGO:00125013920.011
atp catabolic processGO:0006200540.011
agingGO:00075682410.011
behaviorGO:00076102050.011
positive regulation of molecular functionGO:00440932300.011
organophosphate catabolic processGO:00464341480.011
sexual reproductionGO:00199531480.011
Rat
purine nucleoside triphosphate metabolic processGO:00091441410.011
spermatogenesisGO:0007283990.011
Rat
nucleoside phosphate catabolic processGO:19012921400.011
nucleotide catabolic processGO:00091661390.011
cellular response to hormone stimulusGO:00328702470.011
male gamete generationGO:0048232990.011
Rat
protein autophosphorylationGO:0046777660.011
atp metabolic processGO:0046034720.011
response to vitaminGO:00332731310.011
regulation of cellular component organizationGO:00511283680.011
dna metabolic processGO:0006259960.011
purine ribonucleoside triphosphate catabolic processGO:00092071220.011
cation transportGO:00068123820.011
negative regulation of protein phosphorylationGO:0001933440.011
regulation of phosphate metabolic processGO:00192203490.011
purine nucleoside catabolic processGO:00061521240.011
limbic system developmentGO:0021761380.011
sequestering of calcium ionGO:005120880.011
appendage morphogenesisGO:003510740.011
response to metal ionGO:00100382530.011
heart morphogenesisGO:000300730.010
protein catabolic processGO:0030163300.010
regulation of dendrite developmentGO:0050773590.010
negative regulation of cell developmentGO:0010721820.010
regulation of lipid metabolic processGO:0019216680.010
cellular response to acid chemicalGO:0071229750.010
steroid metabolic processGO:0008202730.010
cytosolic calcium ion homeostasisGO:00514801400.010
negative regulation of cellular biosynthetic processGO:00313271610.010
Mouse
axon cargo transportGO:000808810.010
reactive oxygen species biosynthetic processGO:190340980.010
carboxylic acid biosynthetic processGO:0046394830.010
single organism organelle organizationGO:19025891800.010
Mouse Rat
negative regulation of nitrogen compound metabolic processGO:00511721610.010
Mouse
response to retinoic acidGO:0032526630.010
regulation of cellular component movementGO:00512701500.010

Kdm5b disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.036
nervous system diseaseDOID:86300.036
eye diseaseDOID:561400.028
sensory system diseaseDOID:005015500.028
eye and adnexa diseaseDOID:149200.028
retinal diseaseDOID:567900.021
cardiovascular system diseaseDOID:128700.012