IMP: Integrative Multi-species Prediction

Rattus norvegicus

0 known processes

Rrp9

ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)

(Aliases: Rnu3ip2)

Ensembl: ENSRNOG00000012927
RGD: 1307881
Entrez: 363134
UniProtKB: B0BND5

Process Predictions
Disease Predictions

Rrp9 biological process predictions

Show only novel predictionsHighlight processes of functional analogs

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Biological process	GO term ID	Process size	Probability
positive regulation of cellular biosynthetic process	GO:0031328	295	0.062
positive regulation of nitrogen compound metabolic process	GO:0051173	334	0.060
protein localization	GO:0008104	191	0.059
positive regulation of biosynthetic process	GO:0009891	319	0.052
cellular component biogenesis	GO:0044085	368	0.051
immune system process	GO:0002376	204	0.044
single organism biosynthetic process	GO:0044711	342	0.044
positive regulation of nucleobase containing compound metabolic process	GO:0045935	319	0.041
response to extracellular stimulus	GO:0009991	380	0.039
reproductive process	GO:0022414	372	0.039
reproduction	GO:0000003	245	0.038
macromolecule localization	GO:0033036	252	0.037
cellular amino acid metabolic process	GO:0006520	107	0.037
single organism reproductive process	GO:0044702	297	0.036
regulation of cell differentiation	GO:0045595	320	0.035
negative regulation of programmed cell death	GO:0043069	183	0.034
regulation of cell proliferation	GO:0042127	359	0.034
positive regulation of cell proliferation	GO:0008284	249	0.033
amine metabolic process	GO:0009308	38	0.033
neuron differentiation	GO:0030182	368	0.033
chromosome segregation	GO:0007059	2	0.032
catabolic process	GO:0009056	351	0.030
response to purine containing compound	GO:0014074	126	0.029
establishment of protein localization	GO:0045184	141	0.029
regulation of cell development	GO:0060284	263	0.029
rna metabolic process	GO:0016070	406	0.029
positive regulation of phosphorus metabolic process	GO:0010562	262	0.029
regulation of cellular ketone metabolic process	GO:0010565	27	0.028
carboxylic acid transport	GO:0046942	115	0.026
cellular catabolic process	GO:0044248	295	0.026
cellular amine metabolic process	GO:0044106	38	0.025
positive regulation of macromolecule biosynthetic process	GO:0010557	247	0.024
regulation of transcription from rna polymerase ii promoter	GO:0006357	234	0.024
intracellular protein transport	GO:0006886	79	0.024
macromolecular complex assembly	GO:0065003	273	0.024
regulation of cellular amino acid metabolic process	GO:0006521	2	0.023
organic anion transport	GO:0015711	132	0.023
regulation of nucleic acid templated transcription	GO:1903506	380	0.022
sex differentiation	GO:0007548	113	0.022
reproductive structure development	GO:0048608	128	0.021
reproductive system development	GO:0061458	128	0.021
programmed cell death	GO:0012501	392	0.021
ion transmembrane transport	GO:0034220	365	0.021
positive regulation of rna metabolic process	GO:0051254	203	0.021
gonad development	GO:0008406	104	0.021
regulation of neurogenesis	GO:0050767	247	0.021
regulation of cellular amine metabolic process	GO:0033238	8	0.020
single organism cellular localization	GO:1902580	102	0.020
regulation of membrane potential	GO:0042391	110	0.020
cgmp biosynthetic process	GO:0006182	15	0.019
cellular component assembly	GO:0022607	360	0.019
chemical homeostasis	GO:0048878	292	0.019
negative regulation of mitotic cell cycle phase transition	GO:1901991	3	0.019
positive regulation of cellular amine metabolic process	GO:0033240	3	0.018
response to vitamin	GO:0033273	131	0.018
regulation of apoptotic process	GO:0042981	335	0.018
regulation of nervous system development	GO:0051960	264	0.018
negative regulation of circadian sleep wake cycle non rem sleep	GO:0042323	2	0.018
negative regulation of metabolic process	GO:0009892	331	0.018
establishment of protein localization to organelle	GO:0072594	44	0.018
positive regulation of gene expression	GO:0010628	244	0.018
regulation of programmed cell death	GO:0043067	341	0.018
vesicle mediated transport	GO:0016192	181	0.018
regulation of neuron projection development	GO:0010975	161	0.018
response to peptide hormone	GO:0043434	278	0.018
organophosphate biosynthetic process	GO:0090407	143	0.017
response to organophosphorus	GO:0046683	102	0.017
homeostatic process	GO:0042592	331	0.017
protein phosphorylation	GO:0006468	345	0.017
positive regulation of nucleic acid templated transcription	GO:1903508	197	0.017
negative regulation of apoptotic process	GO:0043066	181	0.017
cell projection organization	GO:0030030	302	0.017
regulation of signal transduction	GO:0009966	318	0.017
response to transition metal nanoparticle	GO:1990267	122	0.016
cellular response to stress	GO:0033554	269	0.016
positive regulation of cellular amino acid metabolic process	GO:0045764	1	0.016
multi organism reproductive process	GO:0044703	262	0.016
intracellular transport	GO:0046907	185	0.016
ncrna processing	GO:0034470	3	0.016
cellular ketone metabolic process	GO:0042180	51	0.016
regulation of anatomical structure morphogenesis	GO:0022603	141	0.016
neuron projection development	GO:0031175	273	0.016
cell cycle checkpoint	GO:0000075	2	0.016
central nervous system development	GO:0007417	311	0.016
purine containing compound metabolic process	GO:0072521	253	0.016
regulation of cell cycle	GO:0051726	73	0.016
cellular macromolecule localization	GO:0070727	122	0.015
aging	GO:0007568	241	0.015
positive regulation of metanephros development	GO:0072216	2	0.015
ribose phosphate metabolic process	GO:0019693	235	0.015
endocytosis	GO:0006897	84	0.015
organic acid transport	GO:0015849	116	0.015
response to nutrient	GO:0007584	248	0.015
positive regulation of cell development	GO:0010720	176	0.015
cell projection morphogenesis	GO:0048858	123	0.014
cellular protein localization	GO:0034613	122	0.014
regulation of cellular protein metabolic process	GO:0032268	267	0.014
positive regulation of cellular component organization	GO:0051130	200	0.014
transcription from rna polymerase ii promoter	GO:0006366	252	0.014
response to oxygen levels	GO:0070482	265	0.014
neuron development	GO:0048666	286	0.014
organic substance catabolic process	GO:1901575	316	0.014
regulation of catalytic activity	GO:0050790	304	0.013
carbohydrate derivative metabolic process	GO:1901135	346	0.013
negative regulation of cell cycle phase transition	GO:1901988	4	0.013
negative regulation of protein metabolic process	GO:0051248	114	0.013
response to nutrient levels	GO:0031667	370	0.013
negative regulation of gene expression	GO:0010629	199	0.013
regulation of neuron differentiation	GO:0045664	208	0.013
protein complex assembly	GO:0006461	263	0.013
positive regulation of mitochondrion organization	GO:0010822	4	0.013
cellular response to oxygen containing compound	GO:1901701	386	0.013
positive regulation of transcription dna templated	GO:0045893	197	0.013
developmental process involved in reproduction	GO:0003006	159	0.013
positive regulation of nervous system development	GO:0051962	178	0.012
protein targeting	GO:0006605	61	0.012
negative regulation of extrinsic apoptotic signaling pathway	GO:2001237	4	0.012
negative regulation of cellular metabolic process	GO:0031324	281	0.012
organelle organization	GO:0006996	266	0.012
oxoacid metabolic process	GO:0043436	290	0.012
positive regulation of neurogenesis	GO:0050769	165	0.012
cellular response to fluid shear stress	GO:0071498	4	0.012
synaptic transmission	GO:0007268	235	0.012
negative regulation of cellular protein metabolic process	GO:0032269	106	0.012
positive regulation of neuron differentiation	GO:0045666	126	0.012
positive regulation of ion transport	GO:0043270	94	0.012
cell cycle	GO:0007049	101	0.012
regulation of protein metabolic process	GO:0051246	289	0.011
regulation of cellular component organization	GO:0051128	368	0.011
nucleic acid templated transcription	GO:0097659	379	0.011
cellular divalent inorganic cation homeostasis	GO:0072503	162	0.011
nucleobase containing small molecule metabolic process	GO:0055086	316	0.011
response to other organism	GO:0051707	220	0.011
response to oxidative stress	GO:0006979	186	0.011
single organism intracellular transport	GO:1902582	166	0.011
response to toxic substance	GO:0009636	133	0.011
retina morphogenesis in camera type eye	GO:0060042	1	0.011
dna integrity checkpoint	GO:0031570	2	0.011
regulation of protein modification process	GO:0031399	194	0.011
protein complex biogenesis	GO:0070271	263	0.011
rna localization	GO:0006403	4	0.011
transmembrane transport	GO:0055085	412	0.011
response to decreased oxygen levels	GO:0036293	237	0.011
organophosphate metabolic process	GO:0019637	370	0.010
ribonucleotide biosynthetic process	GO:0009260	85	0.010
regulation of catabolic process	GO:0009894	113	0.010
multicellular organism reproduction	GO:0032504	233	0.010
positive regulation of multicellular organismal process	GO:0051240	387	0.010
positive regulation of phosphorylation	GO:0042327	177	0.010
cation transport	GO:0006812	382	0.010
camera type eye morphogenesis	GO:0048593	2	0.010
cellular response to growth factor stimulus	GO:0071363	162	0.010
carboxylic acid metabolic process	GO:0019752	289	0.010

Rrp9 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease	DO term ID	Probability
disease of anatomical entity	DOID:7	0.026
nervous system disease	DOID:863	0.026
central nervous system disease	DOID:331	0.014

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