Rattus norvegicus

0 known processes

Lims2

LIM and senescent cell antigen like domains 2

Lims2 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
regulation of apoptotic processGO:00429813350.154
Mouse
regulation of protein metabolic processGO:00512462890.135
regulation of catalytic activityGO:00507903040.121
positive regulation of phosphorus metabolic processGO:00105622620.120
regulation of molecular functionGO:00650093980.118
apoptotic processGO:00069153810.100
Mouse
intracellular signal transductionGO:00355563140.096
Zebrafish
blood circulationGO:00080151830.095
Zebrafish
reproductive processGO:00224143720.092
single organism biosynthetic processGO:00447113420.092
regulation of signal transductionGO:00099663180.088
Zebrafish Mouse
regulation of cell proliferationGO:00421273590.082
Mouse
catabolic processGO:00090563510.082
positive regulation of signal transductionGO:00099671750.076
Mouse
organic substance catabolic processGO:19015753160.071
regulation of cellular protein metabolic processGO:00322682670.071
regulation of phosphorus metabolic processGO:00511743490.069
programmed cell deathGO:00125013920.068
Mouse
regulation of phosphorylationGO:00423252480.067
single organism catabolic processGO:00447122830.063
cellular catabolic processGO:00442482950.061
regulation of phosphate metabolic processGO:00192203490.061
neuron differentiationGO:00301823680.056
positive regulation of biosynthetic processGO:00098913190.055
response to decreased oxygen levelsGO:00362932370.054
circulatory system processGO:00030131830.052
Zebrafish
negative regulation of metabolic processGO:00098923310.050
positive regulation of protein metabolic processGO:00512471780.050
proteolysisGO:00065081750.049
regulation of intracellular signal transductionGO:19025312180.048
Zebrafish
regulation of cell developmentGO:00602842630.048
regulation of cellular component organizationGO:00511283680.048
positive regulation of programmed cell deathGO:00430681570.048
positive regulation of apoptotic processGO:00430651540.045
regulation of protein modification processGO:00313991940.044
negative regulation of cell communicationGO:00106481580.044
regulation of hydrolase activityGO:00513361430.043
neurological system processGO:00508772190.043
positive regulation of cell communicationGO:00106472710.043
Mouse
negative regulation of response to stimulusGO:00485851550.043
small gtpase mediated signal transductionGO:0007264360.043
cellular lipid metabolic processGO:00442552080.042
positive regulation of nucleobase containing compound metabolic processGO:00459353190.042
cellular chemical homeostasisGO:00550822470.041
metal ion homeostasisGO:00550651860.040
purine containing compound metabolic processGO:00725212530.039
carbohydrate derivative metabolic processGO:19011353460.039
protein phosphorylationGO:00064683450.039
regulation of system processGO:00440572080.039
response to inorganic substanceGO:00100353770.039
positive regulation of nitrogen compound metabolic processGO:00511733340.039
positive regulation of molecular functionGO:00440932300.039
neuron developmentGO:00486662860.038
positive regulation of protein modification processGO:00314011420.037
cellular amino acid metabolic processGO:00065201070.037
locomotionGO:00400112370.037
oxoacid metabolic processGO:00434362900.037
cell cell signalingGO:00072673350.037
positive regulation of developmental processGO:00510942830.036
ribose phosphate metabolic processGO:00196932350.036
negative regulation of signalingGO:00230571570.035
negative regulation of programmed cell deathGO:00430691830.035
Mouse
sensory perception of painGO:0019233730.035
anatomical structure morphogenesisGO:00096532980.034
Mouse
regulation of response to stressGO:00801341260.034
secretionGO:00469033070.033
negative regulation of macromolecule metabolic processGO:00106052600.033
positive regulation of phosphate metabolic processGO:00459372620.033
organonitrogen compound biosynthetic processGO:19015661670.032
response to hypoxiaGO:00016662310.032
regulation of cellular amino acid metabolic processGO:000652120.032
organophosphate metabolic processGO:00196373700.032
regenerationGO:00310991630.032
positive regulation of cell deathGO:00109421840.031
neuron projection developmentGO:00311752730.031
negative regulation of protein metabolic processGO:00512481140.031
regulation of cellular ketone metabolic processGO:0010565270.031
regulation of cell migrationGO:00303341280.031
response to extracellular stimulusGO:00099913800.031
response to woundingGO:00096112540.031
response to oxygen levelsGO:00704822650.031
negative regulation of cellular metabolic processGO:00313242810.030
positive regulation of catalytic activityGO:00430851840.030
regulation of protein phosphorylationGO:00019321830.030
regulation of cellular amine metabolic processGO:003323880.030
cellular amine metabolic processGO:0044106380.030
vascular process in circulatory systemGO:0003018960.030
carboxylic acid metabolic processGO:00197522890.029
cell projection organizationGO:00300303020.029
regulation of programmed cell deathGO:00430673410.029
Mouse
positive regulation of cellular protein metabolic processGO:00322701670.029
vesicle mediated transportGO:00161921810.029
inorganic cation transmembrane transportGO:00986622020.029
positive regulation of intracellular signal transductionGO:19025331380.029
wound healingGO:00420601220.029
ras protein signal transductionGO:0007265290.029
cellular metal ion homeostasisGO:00068751720.028
monovalent inorganic cation transportGO:00156721720.028
cell migrationGO:00164771970.028
amine metabolic processGO:0009308380.028
regulation of mapk cascadeGO:00434081160.027
central nervous system developmentGO:00074173110.027
agingGO:00075682410.027
positive regulation of response to stimulusGO:00485842850.027
Mouse
positive regulation of cell proliferationGO:00082842490.027
cellular component assemblyGO:00226073600.027
Rat
single organism reproductive processGO:00447022970.027
positive regulation of macromolecule biosynthetic processGO:00105572470.027
cellular divalent inorganic cation homeostasisGO:00725031620.027
cellular homeostasisGO:00197252520.027
liver developmentGO:0001889900.026
Mouse
muscle cell proliferationGO:0033002840.026
tissue developmentGO:00098882520.026
protein complex subunit organizationGO:00718223020.026
Rat
positive regulation of multicellular organismal processGO:00512403870.026
response to peptideGO:19016522920.026
response to nutrient levelsGO:00316673700.026
carbohydrate derivative biosynthetic processGO:19011371240.025
macromolecule localizationGO:00330362520.025
behaviorGO:00076102050.025
positive regulation of transportGO:00510502450.025
purine ribonucleoside metabolic processGO:00461281680.025
negative regulation of molecular functionGO:00440921330.025
gastrulationGO:000736920.025
cation transportGO:00068123820.025
biological adhesionGO:00226101100.024
Mouse
multi multicellular organism processGO:00447061380.024
organic acid metabolic processGO:00060822920.024
response to carbohydrateGO:00097431830.024
purine ribonucleotide metabolic processGO:00091502270.024
nucleobase containing small molecule metabolic processGO:00550863160.024
negative regulation of apoptotic processGO:00430661810.024
Mouse
positive regulation of cell developmentGO:00107201760.024
localization of cellGO:00516742020.024
regulation of transferase activityGO:00513381230.024
cellular response to endogenous stimulusGO:00714953770.023
positive regulation of phosphorylationGO:00423271770.023
positive regulation of cellular biosynthetic processGO:00313282950.023
organonitrogen compound catabolic processGO:19015651790.023
positive regulation of signalingGO:00230562700.022
Mouse
cellular calcium ion homeostasisGO:00068741600.022
positive regulation of mapk cascadeGO:0043410920.022
metal ion transportGO:00300012890.022
positive regulation of protein phosphorylationGO:00019341350.021
response to metal ionGO:00100382530.021
sensory perceptionGO:00076001010.021
ion homeostasisGO:00508012120.021
negative regulation of nitrogen compound metabolic processGO:00511721610.021
regulation of kinase activityGO:00435491170.021
divalent inorganic cation homeostasisGO:00725071650.021
regulation of anatomical structure sizeGO:00900661350.021
positive regulation of transferase activityGO:0051347810.021
nucleotide metabolic processGO:00091172790.021
macromolecular complex assemblyGO:00650032730.020
Rat
regulation of cell differentiationGO:00455953200.020
multi organism reproductive processGO:00447032620.020
nucleoside phosphate biosynthetic processGO:19012931020.020
brain developmentGO:00074202470.020
regulation of phagocytosis engulfmentGO:006009940.020
establishment of protein localizationGO:00451841410.020
regulation of tube sizeGO:0035150890.020
cellular response to oxygen containing compoundGO:19017013860.020
multicellular organismal signalingGO:0035637440.020
organophosphate biosynthetic processGO:00904071430.020
protein complex biogenesisGO:00702712630.020
Rat
response to ketoneGO:19016541820.019
positive regulation of protein kinase activityGO:0045860730.019
circulatory system developmentGO:00723591340.019
macromolecular complex subunit organizationGO:00439333390.019
Rat
organic hydroxy compound metabolic processGO:19016151150.019
homeostatic processGO:00425923310.019
regulation of neuron deathGO:19012141150.019
intracellular transportGO:00469071850.019
fatty acid metabolic processGO:0006631990.019
cell cell junction organizationGO:0045216200.019
Mouse
g protein coupled receptor signaling pathwayGO:00071862420.019
carbohydrate metabolic processGO:00059751300.019
calcium ion homeostasisGO:00550741620.019
carbohydrate derivative catabolic processGO:19011361470.019
transmission of nerve impulseGO:0019226420.019
purine ribonucleotide catabolic processGO:00091541360.019
protein complex assemblyGO:00064612630.018
Rat
regulation of cell growthGO:0001558850.018
regulation of secretionGO:00510462240.018
regulation of cell projection organizationGO:00313441750.018
multicellular organism reproductionGO:00325042330.018
negative regulation of catalytic activityGO:00430861030.018
cellular component biogenesisGO:00440853680.018
Rat
reproductionGO:00000032450.018
response to organophosphorusGO:00466831020.018
regulation of defense responseGO:0031347680.018
protein localizationGO:00081041910.018
cellular ion homeostasisGO:00068731840.018
negative regulation of multicellular organismal processGO:00512412030.018
Mouse
regulation of rna metabolic processGO:00512523910.018
positive regulation of cellular component organizationGO:00511302000.018
response to peptide hormoneGO:00434342780.018
regulation of blood vessel sizeGO:0050880890.018
ribonucleotide metabolic processGO:00092592310.018
cell adhesionGO:00071551100.018
Mouse
nucleoside phosphate metabolic processGO:00067532830.017
response to tumor necrosis factorGO:0034612560.017
response to growth factorGO:00708481890.017
nitrogen compound transportGO:00717052290.017
regulation of canonical wnt signaling pathwayGO:006082840.017
unsaturated fatty acid metabolic processGO:0033559390.017
muscle contractionGO:0006936880.017
muscle system processGO:00030121150.017
chemical homeostasisGO:00488782920.017
lipid metabolic processGO:00066292830.017
peptide secretionGO:0002790860.017
ribonucleoside metabolic processGO:00091191740.017
positive regulation of cellular amine metabolic processGO:003324030.017
response to oxidative stressGO:00069791860.017
regulation of multicellular organismal developmentGO:20000263760.017
Mouse
cellular ketone metabolic processGO:0042180510.017
cellular response to growth factor stimulusGO:00713631620.017
positive regulation of phagocytosis engulfmentGO:006010040.017
purine nucleotide catabolic processGO:00061951360.017
formation of primary germ layerGO:000170410.017
regulation of small gtpase mediated signal transductionGO:0051056480.017
negative regulation of developmental processGO:00510931250.017
Mouse
positive regulation of kinase activityGO:0033674770.017
regulation of secretion by cellGO:19035302080.017
organelle organizationGO:00069962660.017
defense responseGO:00069521940.016
regulation of blood pressureGO:0008217830.016
cellular response to stressGO:00335542690.016
heart morphogenesisGO:000300730.016
nucleoside catabolic processGO:00091641260.016
hepaticobiliary system developmentGO:0061008900.016
Mouse
response to hydrogen peroxideGO:0042542890.016
neuronal action potentialGO:0019228350.016
regulation of neurogenesisGO:00507672470.016
actin filament based processGO:0030029860.016
regulation of proteolysisGO:0030162660.016
regulation of g0 to g1 transitionGO:007031630.016
protein maturationGO:0051604680.016
regulation of blood circulationGO:19035221100.016
nucleoside metabolic processGO:00091161790.016
cation transmembrane transportGO:00986552630.016
nucleobase containing compound catabolic processGO:00346551520.016
positive regulation of gene expressionGO:00106282440.016
potassium ion transportGO:0006813970.016
cellular component movementGO:00069282480.016
negative regulation of cellular protein metabolic processGO:00322691060.016
organic cyclic compound catabolic processGO:19013611750.015
response to nutrientGO:00075842480.015
regulation of proteasomal protein catabolic processGO:006113640.015
rna biosynthetic processGO:00327743800.015
head developmentGO:00603222470.015
sodium ion transportGO:0006814820.015
aromatic compound catabolic processGO:00194391680.015
regulation of membrane potentialGO:00423911100.015
mapk cascadeGO:00001651400.015
smooth muscle cell proliferationGO:0048659770.015
regulation of nervous system developmentGO:00519602640.015
positive regulation of cell motilityGO:2000147970.015
ion transmembrane transportGO:00342203650.015
epithelium developmentGO:0060429960.015
purine nucleotide metabolic processGO:00061632290.015
positive regulation of cell migrationGO:0030335960.015
growthGO:00400071650.015
positive regulation of cellular component movementGO:00512721020.015
anatomical structure formation involved in morphogenesisGO:0048646830.015
regulation of cell motilityGO:20001451310.014
neuron deathGO:00709971270.014
peptide metabolic processGO:0006518320.014
protein transportGO:00150311320.014
purine ribonucleoside catabolic processGO:00461301240.014
mesoderm developmentGO:000749820.014
multicellular organismal reproductive processGO:00486092330.014
cellular cation homeostasisGO:00300031800.014
response to purine containing compoundGO:00140741260.014
regulation of muscle system processGO:0090257790.014
regulation of nucleotide metabolic processGO:00061401170.014
divalent metal ion transportGO:00708381320.014
heterocycle catabolic processGO:00467001670.014
cardiovascular system developmentGO:00723581340.014
positive regulation of cell differentiationGO:00455972170.014
reactive nitrogen species metabolic processGO:200105710.014
hemostasisGO:0007599260.014
positive regulation of smooth muscle cell proliferationGO:0048661510.014
cellular protein localizationGO:00346131220.014
cation homeostasisGO:00550801950.014
regulation of body fluid levelsGO:0050878900.014
renal system developmentGO:0072001670.014
reactive oxygen species biosynthetic processGO:190340980.014
synaptic transmissionGO:00072682350.014
positive regulation of cellular amino acid metabolic processGO:004576410.014
membrane organizationGO:0061024940.014
response to bacteriumGO:00096172000.014
lipid catabolic processGO:0016042460.014
kidney developmentGO:0001822670.014
response to reactive oxygen speciesGO:00003021200.013
regulation of neurological system processGO:0031644430.013
ossificationGO:0001503700.013
regulation of cellular localizationGO:00603412630.013
response to corticosteroidGO:00319602350.013
response to activityGO:0014823730.013
divalent inorganic cation transportGO:00725111340.013
positive regulation of neurogenesisGO:00507691650.013
regulation of hormone levelsGO:00108171870.013
regulation of cellular component movementGO:00512701500.013
regulation of reactive oxygen species biosynthetic processGO:190342650.013
cellular nitrogen compound catabolic processGO:00442701630.013
regulation of protein kinase activityGO:00458591050.013
single organism intracellular transportGO:19025821660.013
regulation of response to external stimulusGO:00321011060.013
protein oligomerizationGO:00512591910.013
Rat
negative regulation of cell deathGO:00605482290.013
Mouse
positive regulation of response to external stimulusGO:0032103510.013
sodium ion transmembrane transportGO:0035725670.013
positive regulation of hydrolase activityGO:0051345860.013
long chain fatty acid metabolic processGO:0001676320.013
regulation of response to woundingGO:1903034690.013
hormone secretionGO:00468791150.013
regulation of immune system processGO:00026821230.013
secretion by cellGO:00329402480.013
rna metabolic processGO:00160704060.013
response to vitaminGO:00332731310.013
positive regulation of ion transportGO:0043270940.013
single organism cell adhesionGO:0098602460.013
Mouse
purine ribonucleotide biosynthetic processGO:0009152810.013
transcription dna templatedGO:00063513770.013
negative regulation of cell differentiationGO:0045596990.013
negative regulation of phosphorus metabolic processGO:0010563800.013
regulation of locomotionGO:00400121480.012
neuron projection morphogenesisGO:00488121220.012
negative regulation of signal transductionGO:0009968830.012
nucleic acid templated transcriptionGO:00976593790.012
response to acid chemicalGO:00011012220.012
purine containing compound catabolic processGO:00725231380.012
response to biotic stimulusGO:00096072260.012
cellular response to cytokine stimulusGO:00713451270.012
cellular carbohydrate metabolic processGO:0044262720.012
response to external biotic stimulusGO:00432072210.012
defense response to gram negative bacteriumGO:005082930.012
negative regulation of gene expressionGO:00106291990.012
regulation of neuron differentiationGO:00456642080.012
female pregnancyGO:00075651220.012
gamete generationGO:00072761240.012
cellular response to external stimulusGO:00714961180.012
regulation of anatomical structure morphogenesisGO:00226031410.012
Mouse
dephosphorylationGO:0016311980.012
positive regulation of nervous system developmentGO:00519621780.012
negative regulation of phosphate metabolic processGO:0045936800.012
rho protein signal transductionGO:0007266110.012
signal transduction by phosphorylationGO:00230141440.012
response to estrogenGO:00436272320.012
cell cell signaling involved in cell fate commitmentGO:004516820.012
regulation of vasculature developmentGO:1901342440.012
transmembrane transportGO:00550854120.012
regulation of cell adhesionGO:0030155520.012
transmembrane receptor protein tyrosine kinase signaling pathwayGO:0007169850.012
ameboidal type cell migrationGO:0001667260.012
purine nucleoside metabolic processGO:00422781690.012
action potentialGO:0001508540.012
cellular macromolecule localizationGO:00707271220.012
amide transportGO:00428861050.012
protein targetingGO:0006605610.012
positive regulation of cell projection organizationGO:00313461110.011
organophosphate catabolic processGO:00464341480.011
calcium ion transportGO:00068161310.011
regulation of catabolic processGO:00098941130.011
muscle structure developmentGO:0061061870.011
regulation of purine nucleotide metabolic processGO:19005421150.011
regulation of lipid metabolic processGO:0019216680.011
response to transition metal nanoparticleGO:19902671220.011
negative regulation of protein maturationGO:1903318470.011
cyclic nucleotide biosynthetic processGO:0009190630.011
cell activationGO:0001775970.011
ribonucleotide catabolic processGO:00092611360.011
response to calcium ionGO:0051592590.011
vasculature developmentGO:0001944700.011
positive regulation of locomotionGO:00400171020.011
blood vessel morphogenesisGO:0048514580.011
anterior posterior pattern specificationGO:000995210.011
positive regulation of behaviorGO:0048520380.011
negative regulation of rna metabolic processGO:00512531230.011
regulation of transcription dna templatedGO:00063553740.011
regulation of neuron projection developmentGO:00109751610.011
cellular component morphogenesisGO:00329891550.011
lung developmentGO:0030324430.011
reproductive system developmentGO:00614581280.011
positive regulation of transcription dna templatedGO:00458931970.011
regulation of peptide transportGO:0090087870.011
positive regulation of catabolic processGO:0009896780.011
peptide hormone secretionGO:0030072840.011
regulation of rna biosynthetic processGO:20011413810.011
cell cycleGO:00070491010.011
regulation of nucleic acid templated transcriptionGO:19035063800.011
oxidation reduction processGO:00551143040.010
cyclic nucleotide metabolic processGO:0009187800.010
developmental process involved in reproductionGO:00030061590.010
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathwayGO:009010120.010
nucleotide catabolic processGO:00091661390.010
cellular response to nitrogen compoundGO:19016992100.010
hormone transportGO:00099141210.010
cytoskeleton organizationGO:00070101110.010
regulation of peptidase activityGO:0052547550.010
cytoplasmic transportGO:00164821150.010
negative regulation of nucleic acid templated transcriptionGO:19035071170.010
reproductive structure developmentGO:00486081280.010
urogenital system developmentGO:0001655780.010
regulation of map kinase activityGO:0043405530.010
tube developmentGO:0035295890.010
response to ethanolGO:00454711620.010
blood vessel developmentGO:0001568690.010
negative regulation of innate immune responseGO:004582440.010
response to amino acidGO:0043200750.010
cellular response to abiotic stimulusGO:0071214850.010
regulation of inflammatory responseGO:0050727480.010
forebrain developmentGO:0030900980.010
response to other organismGO:00517072200.010
positive regulation of neuron differentiationGO:00456661260.010

Lims2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.034
musculoskeletal system diseaseDOID:1700.034
nervous system diseaseDOID:86300.033
muscular diseaseDOID:008000000.018
muscular dystrophyDOID:988400.018
myopathyDOID:42300.018
muscle tissue diseaseDOID:6600.018
disease of metabolismDOID:001466700.015
central nervous system diseaseDOID:33100.015
bone diseaseDOID:008000100.014
connective tissue diseaseDOID:6500.014
cardiovascular system diseaseDOID:128700.012