| organic acid metabolic process | GO:0006082 | 292 | 0.216 | |
| cofactor metabolic process | GO:0051186 | 95 | 0.170 | |
| porphyrin containing compound metabolic process | GO:0006778 | 8 | 0.095 | |
| tetrapyrrole metabolic process | GO:0033013 | 11 | 0.068 | |
| oxoacid metabolic process | GO:0043436 | 290 | 0.058 | |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.049 | |
| single organism catabolic process | GO:0044712 | 283 | 0.046 | |
| porphyrin containing compound biosynthetic process | GO:0006779 | 6 | 0.043 | |
| response to oxidative stress | GO:0006979 | 186 | 0.042 | Yeast Fly |
| cofactor biosynthetic process | GO:0051188 | 28 | 0.040 | |
| response to inorganic substance | GO:0010035 | 377 | 0.039 | Yeast Fly |
| response to nutrient | GO:0007584 | 248 | 0.039 | |
| response to amine | GO:0014075 | 46 | 0.038 | |
| positive regulation of response to stimulus | GO:0048584 | 285 | 0.037 | |
| liver development | GO:0001889 | 90 | 0.036 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.034 | |
| cation transmembrane transport | GO:0098655 | 263 | 0.034 | |
| cellular response to stress | GO:0033554 | 269 | 0.033 | Yeast Fly |
| response to extracellular stimulus | GO:0009991 | 380 | 0.032 | |
| regulation of neurogenesis | GO:0050767 | 247 | 0.031 | |
| response to monosaccharide | GO:0034284 | 159 | 0.029 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.027 | |
| response to acid chemical | GO:0001101 | 222 | 0.027 | |
| transmembrane transport | GO:0055085 | 412 | 0.026 | |
| cellular catabolic process | GO:0044248 | 295 | 0.026 | |
| regulation of molecular function | GO:0065009 | 398 | 0.025 | Yeast Mouse Fly |
| head development | GO:0060322 | 247 | 0.025 | |
| intracellular signal transduction | GO:0035556 | 314 | 0.025 | |
| catabolic process | GO:0009056 | 351 | 0.025 | |
| positive regulation of multicellular organismal process | GO:0051240 | 387 | 0.024 | |
| regulation of hormone levels | GO:0010817 | 187 | 0.024 | |
| brain development | GO:0007420 | 247 | 0.024 | |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.024 | |
| positive regulation of catalytic activity | GO:0043085 | 184 | 0.023 | Yeast Mouse Fly |
| regulation of catalytic activity | GO:0050790 | 304 | 0.023 | Yeast Mouse Fly |
| hormone metabolic process | GO:0042445 | 69 | 0.022 | |
| central nervous system development | GO:0007417 | 311 | 0.021 | |
| cellular response to endogenous stimulus | GO:0071495 | 377 | 0.021 | |
| nucleoside metabolic process | GO:0009116 | 179 | 0.021 | |
| neuron differentiation | GO:0030182 | 368 | 0.020 | |
| positive regulation of developmental process | GO:0051094 | 283 | 0.020 | |
| cellular hormone metabolic process | GO:0034754 | 49 | 0.020 | |
| reproductive process | GO:0022414 | 372 | 0.020 | |
| glycosyl compound metabolic process | GO:1901657 | 182 | 0.020 | |
| response to wounding | GO:0009611 | 254 | 0.020 | |
| tetrapyrrole biosynthetic process | GO:0033014 | 7 | 0.019 | |
| response to ethanol | GO:0045471 | 162 | 0.019 | |
| homeostatic process | GO:0042592 | 331 | 0.019 | |
| organelle organization | GO:0006996 | 266 | 0.019 | |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.018 | |
| protein complex subunit organization | GO:0071822 | 302 | 0.018 | |
| isoprenoid metabolic process | GO:0006720 | 45 | 0.017 | |
| ion transmembrane transport | GO:0034220 | 365 | 0.017 | |
| regeneration | GO:0031099 | 163 | 0.017 | |
| protein oligomerization | GO:0051259 | 191 | 0.017 | |
| positive regulation of nervous system development | GO:0051962 | 178 | 0.017 | |
| response to metal ion | GO:0010038 | 253 | 0.016 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 262 | 0.016 | |
| inorganic ion transmembrane transport | GO:0098660 | 229 | 0.016 | |
| single organism biosynthetic process | GO:0044711 | 342 | 0.016 | |
| response to carbohydrate | GO:0009743 | 183 | 0.016 | |
| cellular modified amino acid metabolic process | GO:0006575 | 61 | 0.016 | |
| hepaticobiliary system development | GO:0061008 | 90 | 0.016 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 262 | 0.016 | |
| response to toxic substance | GO:0009636 | 133 | 0.016 | |
| chemical homeostasis | GO:0048878 | 292 | 0.016 | |
| response to vitamin | GO:0033273 | 131 | 0.015 | |
| secretion by cell | GO:0032940 | 248 | 0.015 | |
| ion homeostasis | GO:0050801 | 212 | 0.015 | |
| organic hydroxy compound metabolic process | GO:1901615 | 115 | 0.015 | |
| cation transport | GO:0006812 | 382 | 0.015 | Yeast |
| positive regulation of neurogenesis | GO:0050769 | 165 | 0.015 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.015 | |
| metal ion homeostasis | GO:0055065 | 186 | 0.015 | |
| forebrain development | GO:0030900 | 98 | 0.015 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.015 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.015 | |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.015 | Yeast Fly |
| response to peptide | GO:1901652 | 292 | 0.014 | |
| cellular component assembly | GO:0022607 | 360 | 0.014 | |
| regulation of multicellular organismal development | GO:2000026 | 376 | 0.014 | |
| neuron development | GO:0048666 | 286 | 0.014 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.014 | |
| regulation of neuron projection development | GO:0010975 | 161 | 0.013 | |
| lipid metabolic process | GO:0006629 | 283 | 0.013 | |
| regulation of nervous system development | GO:0051960 | 264 | 0.013 | |
| response to bacterium | GO:0009617 | 200 | 0.013 | |
| organophosphate metabolic process | GO:0019637 | 370 | 0.013 | |
| cellular component movement | GO:0006928 | 248 | 0.013 | |
| carbohydrate metabolic process | GO:0005975 | 130 | 0.013 | |
| reproduction | GO:0000003 | 245 | 0.013 | |
| response to estradiol | GO:0032355 | 164 | 0.013 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.013 | |
| rna biosynthetic process | GO:0032774 | 380 | 0.013 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 319 | 0.013 | |
| regulation of cell development | GO:0060284 | 263 | 0.013 | |
| apoptotic process | GO:0006915 | 381 | 0.013 | |
| cation homeostasis | GO:0055080 | 195 | 0.013 | |
| response to estrogen | GO:0043627 | 232 | 0.013 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 316 | 0.012 | |
| cellular chemical homeostasis | GO:0055082 | 247 | 0.012 | |
| cellular homeostasis | GO:0019725 | 252 | 0.012 | |
| organic cyclic compound catabolic process | GO:1901361 | 175 | 0.012 | |
| positive regulation of cell development | GO:0010720 | 176 | 0.012 | |
| response to hexose | GO:0009746 | 144 | 0.012 | |
| intracellular transport | GO:0046907 | 185 | 0.012 | Yeast |
| alcohol metabolic process | GO:0006066 | 77 | 0.012 | |
| cellular lipid metabolic process | GO:0044255 | 208 | 0.012 | |
| multicellular organism reproduction | GO:0032504 | 233 | 0.012 | |
| positive regulation of molecular function | GO:0044093 | 230 | 0.012 | Yeast Mouse Fly |
| pyrimidine nucleoside triphosphate biosynthetic process | GO:0009148 | 3 | 0.012 | |
| positive regulation of signaling | GO:0023056 | 270 | 0.012 | |
| multi organism reproductive process | GO:0044703 | 262 | 0.012 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 260 | 0.012 | |
| single organism intracellular transport | GO:1902582 | 166 | 0.012 | Yeast |
| cell growth | GO:0016049 | 104 | 0.012 | |
| diterpenoid metabolic process | GO:0016101 | 33 | 0.012 | |
| regulation of phosphate metabolic process | GO:0019220 | 349 | 0.011 | |
| regulation of peptide secretion | GO:0002791 | 82 | 0.011 | |
| peptidyl glutamic acid modification | GO:0018200 | 1 | 0.011 | |
| protein phosphorylation | GO:0006468 | 345 | 0.011 | |
| inorganic cation transmembrane transport | GO:0098662 | 202 | 0.011 | |
| regulation of neuron differentiation | GO:0045664 | 208 | 0.011 | |
| terpenoid metabolic process | GO:0006721 | 37 | 0.011 | |
| ribonucleoside metabolic process | GO:0009119 | 174 | 0.011 | |
| eye morphogenesis | GO:0048592 | 4 | 0.011 | |
| cell projection organization | GO:0030030 | 302 | 0.011 | |
| nitrogen compound transport | GO:0071705 | 229 | 0.011 | |
| respiratory system process | GO:0003016 | 3 | 0.011 | |
| response to ketone | GO:1901654 | 182 | 0.011 | |
| response to peptide hormone | GO:0043434 | 278 | 0.011 | |
| regulation of cellular component organization | GO:0051128 | 368 | 0.011 | |
| response to glucose | GO:0009749 | 136 | 0.011 | |
| purine nucleotide metabolic process | GO:0006163 | 229 | 0.011 | |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.011 | |
| neuron projection development | GO:0031175 | 273 | 0.010 | |
| secretion | GO:0046903 | 307 | 0.010 | |
| monocarboxylic acid metabolic process | GO:0032787 | 152 | 0.010 | |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.010 | |
| heme biosynthetic process | GO:0006783 | 4 | 0.010 | |
| nucleoside phosphate metabolic process | GO:0006753 | 283 | 0.010 | |
| tissue development | GO:0009888 | 252 | 0.010 | |
| response to fatty acid | GO:0070542 | 65 | 0.010 | |
| locomotion | GO:0040011 | 237 | 0.010 | |
| protein complex assembly | GO:0006461 | 263 | 0.010 | |
| purine containing compound metabolic process | GO:0072521 | 253 | 0.010 | |
| ribonucleotide metabolic process | GO:0009259 | 231 | 0.010 | |
| nucleotide metabolic process | GO:0009117 | 279 | 0.010 | |
| positive regulation of cell differentiation | GO:0045597 | 217 | 0.010 | |
| regulation of response to stress | GO:0080134 | 126 | 0.010 | |
