IMP: Integrative Multi-species Prediction

Rattus norvegicus

0 known processes

Trappc6b

trafficking protein particle complex 6B

(Aliases: RGD1309325)

Ensembl: ENSRNOG00000004103
Entrez: 299075
RGD: 1309325
UniProtKB: D3ZES2

Process Predictions
Disease Predictions

Trappc6b biological process predictions

Show only novel predictionsHighlight processes of functional analogs

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Biological process	GO term ID	Process size	Probability
ribonucleotide metabolic process	GO:0009259	231	0.153
cellular catabolic process	GO:0044248	295	0.152
nucleoside metabolic process	GO:0009116	179	0.092
nucleoside triphosphate metabolic process	GO:0009141	144	0.064
ribonucleoside metabolic process	GO:0009119	174	0.061
early endosome to late endosome transport	GO:0045022	2	0.060
postsynaptic density protein 95 clustering	GO:0097119	2	0.057
organic substance catabolic process	GO:1901575	316	0.055
regulation of molecular function	GO:0065009	398	0.049
regulation of vesicle mediated transport	GO:0060627	81	0.046
nucleotide metabolic process	GO:0009117	279	0.045
single organism catabolic process	GO:0044712	283	0.043
cell projection organization	GO:0030030	302	0.041
regulation of cell migration	GO:0030334	128	0.041
neuron projection development	GO:0031175	273	0.040
purine ribonucleotide metabolic process	GO:0009150	227	0.040
regulation of cellular protein metabolic process	GO:0032268	267	0.039
transmembrane transport	GO:0055085	412	0.038
acetyl coa biosynthetic process	GO:0006085	6	0.036
regulation of cellular component organization	GO:0051128	368	0.033
spindle organization	GO:0007051	2	0.033
purine containing compound metabolic process	GO:0072521	253	0.033
regulation of catalytic activity	GO:0050790	304	0.032
regulation of cell motility	GO:2000145	131	0.032
aromatic compound catabolic process	GO:0019439	168	0.031
negative regulation of metabolic process	GO:0009892	331	0.031
purine nucleotide metabolic process	GO:0006163	229	0.031
nucleoside phosphate metabolic process	GO:0006753	283	0.031
cellular protein localization	GO:0034613	122	0.030
cell migration	GO:0016477	197	0.030
nucleobase containing small molecule metabolic process	GO:0055086	316	0.029
catabolic process	GO:0009056	351	0.029
cell motility	GO:0048870	202	0.028
vesicle mediated transport	GO:0016192	181	0.027
negative regulation of signal transduction	GO:0009968	83	0.026
regulation of ras gtpase activity	GO:0032318	32	0.026
nucleoside triphosphate catabolic process	GO:0009143	123	0.026
regulation of synaptic transmission	GO:0050804	141	0.026
cellular component movement	GO:0006928	248	0.025
cellular nitrogen compound catabolic process	GO:0044270	163	0.024
carbohydrate derivative metabolic process	GO:1901135	346	0.024
regulation of cell proliferation	GO:0042127	359	0.023
ras protein signal transduction	GO:0007265	29	0.023
positive regulation of cellular component organization	GO:0051130	200	0.023
response to decreased oxygen levels	GO:0036293	237	0.023
acetyl coa biosynthetic process from pyruvate	GO:0006086	5	0.023
nucleobase containing compound catabolic process	GO:0034655	152	0.023
positive regulation of protein metabolic process	GO:0051247	178	0.022
atp metabolic process	GO:0046034	72	0.022
response to external biotic stimulus	GO:0043207	221	0.022
regulation of protein metabolic process	GO:0051246	289	0.021
positive regulation of multicellular organismal process	GO:0051240	387	0.021
organelle organization	GO:0006996	266	0.021
organonitrogen compound catabolic process	GO:1901565	179	0.021
cell morphogenesis	GO:0000902	142	0.020
ribose phosphate metabolic process	GO:0019693	235	0.020
regulation of cell differentiation	GO:0045595	320	0.020
cellular response to endogenous stimulus	GO:0071495	377	0.019
regulation of neuronal synaptic plasticity	GO:0048168	31	0.019
nucleobase biosynthetic process	GO:0046112	2	0.019
organic cyclic compound catabolic process	GO:1901361	175	0.019
regulation of signal transduction	GO:0009966	318	0.018
synaptic transmission	GO:0007268	235	0.018
organophosphate catabolic process	GO:0046434	148	0.018
purine ribonucleoside triphosphate metabolic process	GO:0009205	140	0.018
cellular response to oxygen containing compound	GO:1901701	386	0.018
regulation of phosphorus metabolic process	GO:0051174	349	0.018
purine ribonucleoside metabolic process	GO:0046128	168	0.018
negative regulation of macromolecule metabolic process	GO:0010605	260	0.018
cytoplasmic transport	GO:0016482	115	0.018
protein localization	GO:0008104	191	0.018
nucleoside catabolic process	GO:0009164	126	0.017
protein transport	GO:0015031	132	0.017
purine nucleoside metabolic process	GO:0042278	169	0.017
regulation of protein modification process	GO:0031399	194	0.017
homeostatic process	GO:0042592	331	0.017
glycosyl compound metabolic process	GO:1901657	182	0.017
ribonucleoside monophosphate metabolic process	GO:0009161	88	0.016
macromolecule localization	GO:0033036	252	0.016
regulation of cellular component movement	GO:0051270	150	0.016
neuron differentiation	GO:0030182	368	0.016
intracellular signal transduction	GO:0035556	314	0.016
positive regulation of cellular protein metabolic process	GO:0032270	167	0.015
positive regulation of transport	GO:0051050	245	0.015
single organism intracellular transport	GO:1902582	166	0.015
response to biotic stimulus	GO:0009607	226	0.015
regulation of programmed cell death	GO:0043067	341	0.015
regulation of protein phosphorylation	GO:0001932	183	0.015
regulation of catabolic process	GO:0009894	113	0.015
ribonucleoside triphosphate metabolic process	GO:0009199	141	0.015
macromolecule catabolic process	GO:0009057	58	0.015
positive regulation of response to stimulus	GO:0048584	285	0.014
regulation of phosphorylation	GO:0042325	248	0.014
regulation of synaptic plasticity	GO:0048167	70	0.014
positive regulation of signal transduction	GO:0009967	175	0.014
cellular response to hormone stimulus	GO:0032870	247	0.014
cell fate determination	GO:0001709	2	0.014
response to hypoxia	GO:0001666	231	0.014
cellular amine metabolic process	GO:0044106	38	0.014
ion transmembrane transport	GO:0034220	365	0.014
cellular homeostasis	GO:0019725	252	0.014
regulation of cellular catabolic process	GO:0031329	101	0.014
apoptotic process	GO:0006915	381	0.014
intracellular transport	GO:0046907	185	0.014
cellular response to growth factor stimulus	GO:0071363	162	0.014
neuron development	GO:0048666	286	0.013
response to oxidative stress	GO:0006979	186	0.013
cellular component morphogenesis	GO:0032989	155	0.013
negative regulation of cell communication	GO:0010648	158	0.013
cell cycle	GO:0007049	101	0.013
response to inorganic substance	GO:0010035	377	0.013
purine ribonucleoside catabolic process	GO:0046130	124	0.013
anatomical structure formation involved in morphogenesis	GO:0048646	83	0.013
meiotic cell cycle process	GO:1903046	3	0.013
cellular metal ion homeostasis	GO:0006875	172	0.013
organophosphate metabolic process	GO:0019637	370	0.013
cellular component biogenesis	GO:0044085	368	0.013
regulation of apoptotic process	GO:0042981	335	0.013
negative regulation of cellular component organization	GO:0051129	83	0.013
negative regulation of jnk cascade	GO:0046329	4	0.013
positive regulation of nitrogen compound metabolic process	GO:0051173	334	0.013
heterocycle catabolic process	GO:0046700	167	0.013
programmed cell death	GO:0012501	392	0.012
regulation of locomotion	GO:0040012	148	0.012
purine nucleoside triphosphate catabolic process	GO:0009146	122	0.012
purine nucleoside triphosphate metabolic process	GO:0009144	141	0.012
negative regulation of cell death	GO:0060548	229	0.012
protein phosphorylation	GO:0006468	345	0.012
anatomical structure morphogenesis	GO:0009653	298	0.012
positive regulation of locomotion	GO:0040017	102	0.012
response to oxygen levels	GO:0070482	265	0.012
positive regulation of nervous system development	GO:0051962	178	0.012
negative regulation of signaling	GO:0023057	157	0.012
gtp catabolic process	GO:0006184	71	0.012
positive regulation of cellular component movement	GO:0051272	102	0.011
negative regulation of stress activated protein kinase signaling cascade	GO:0070303	4	0.011
multicellular organismal reproductive process	GO:0048609	233	0.011
embryonic pattern specification	GO:0009880	1	0.011
organ formation	GO:0048645	3	0.011
single organism organelle organization	GO:1902589	180	0.011
multi organism reproductive process	GO:0044703	262	0.011
regeneration	GO:0031099	163	0.011
nucleoside phosphate catabolic process	GO:1901292	140	0.011
histone h3 acetylation	GO:0043966	2	0.011
positive regulation of cellular biosynthetic process	GO:0031328	295	0.011
ribonucleotide catabolic process	GO:0009261	136	0.011
negative regulation of programmed cell death	GO:0043069	183	0.011
endosome organization	GO:0007032	3	0.011
regulation of nervous system development	GO:0051960	264	0.011
thioester biosynthetic process	GO:0035384	7	0.011
cellular response to peptide hormone stimulus	GO:0071375	120	0.011
negative regulation of molecular function	GO:0044092	133	0.011
regulation of nucleic acid templated transcription	GO:1903506	380	0.011
response to extracellular stimulus	GO:0009991	380	0.010
cellular response to stress	GO:0033554	269	0.010
rho protein signal transduction	GO:0007266	11	0.010
regulation of neurogenesis	GO:0050767	247	0.010
guanosine containing compound catabolic process	GO:1901069	71	0.010
positive regulation of cell differentiation	GO:0045597	217	0.010
positive regulation of molecular function	GO:0044093	230	0.010
nucleic acid templated transcription	GO:0097659	379	0.010
positive regulation of cell development	GO:0010720	176	0.010
ribonucleoside triphosphate catabolic process	GO:0009203	122	0.010
cellular macromolecule catabolic process	GO:0044265	29	0.010

Trappc6b disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease	DO term ID	Probability
nervous system disease	DOID:863	0.055
sensory system disease	DOID:0050155	0.055
disease of anatomical entity	DOID:7	0.055
eye and adnexa disease	DOID:1492	0.024
eye disease	DOID:5614	0.024
retinal disease	DOID:5679	0.020
retinal degeneration	DOID:8466	0.019
disease of metabolism	DOID:0014667	0.010

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