| programmed cell death | GO:0012501 | 392 | 0.159 | Rat Worm |
| cellular response to endogenous stimulus | GO:0071495 | 377 | 0.126 | Fly |
| cellular response to hormone stimulus | GO:0032870 | 247 | 0.117 | |
| negative regulation of cell death | GO:0060548 | 229 | 0.116 | Rat |
| apoptotic process | GO:0006915 | 381 | 0.106 | Rat |
| transcription dna templated | GO:0006351 | 377 | 0.099 | Yeast Rat Worm |
| response to extracellular stimulus | GO:0009991 | 380 | 0.095 | Fly |
| transcription from rna polymerase ii promoter | GO:0006366 | 252 | 0.072 | Yeast Rat Worm |
| regulation of cell proliferation | GO:0042127 | 359 | 0.069 | |
| proteolysis | GO:0006508 | 175 | 0.067 | Rat |
| positive regulation of protein phosphorylation | GO:0001934 | 135 | 0.067 | Rat Fly |
| response to nutrient levels | GO:0031667 | 370 | 0.067 | Fly |
| cellular response to peptide hormone stimulus | GO:0071375 | 120 | 0.066 | |
| regulation of apoptotic process | GO:0042981 | 335 | 0.062 | Rat |
| cell projection organization | GO:0030030 | 302 | 0.061 | Rat |
| central nervous system development | GO:0007417 | 311 | 0.061 | Rat |
| carboxylic acid metabolic process | GO:0019752 | 289 | 0.060 | Rat |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 247 | 0.060 | Yeast Rat Worm |
| rna biosynthetic process | GO:0032774 | 380 | 0.059 | Yeast Rat Worm |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.057 | Yeast Rat Worm |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 319 | 0.057 | Yeast Rat Worm |
| macromolecular complex subunit organization | GO:0043933 | 339 | 0.052 | Rat |
| positive regulation of cell communication | GO:0010647 | 271 | 0.052 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 197 | 0.049 | Yeast Rat Worm |
| brain development | GO:0007420 | 247 | 0.047 | |
| reproductive system development | GO:0061458 | 128 | 0.046 | Worm |
| cellular response to lipid | GO:0071396 | 201 | 0.045 | Rat |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 153 | 0.044 | Rat |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 161 | 0.044 | Rat |
| single organism biosynthetic process | GO:0044711 | 342 | 0.044 | Yeast Rat |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 234 | 0.044 | Yeast Rat Worm Fly |
| regulation of response to stress | GO:0080134 | 126 | 0.044 | Rat Fly |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.043 | Yeast Rat Worm |
| organic acid metabolic process | GO:0006082 | 292 | 0.043 | Rat |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.041 | Yeast Rat Worm |
| response to peptide | GO:1901652 | 292 | 0.041 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 316 | 0.040 | |
| positive regulation of gene expression | GO:0010628 | 244 | 0.040 | Yeast Rat Worm |
| dna metabolic process | GO:0006259 | 96 | 0.040 | Yeast Rat |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.039 | Rat Fly |
| response to monosaccharide | GO:0034284 | 159 | 0.038 | Rat |
| positive regulation of molecular function | GO:0044093 | 230 | 0.038 | Rat |
| aging | GO:0007568 | 241 | 0.038 | Fly |
| regulation of programmed cell death | GO:0043067 | 341 | 0.037 | Rat |
| regulation of nucleic acid templated transcription | GO:1903506 | 380 | 0.037 | Yeast Rat Worm Fly |
| response to ethanol | GO:0045471 | 162 | 0.037 | |
| negative regulation of gene expression | GO:0010629 | 199 | 0.036 | Rat |
| response to peptide hormone | GO:0043434 | 278 | 0.036 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.035 | |
| regulation of rna metabolic process | GO:0051252 | 391 | 0.035 | Yeast Rat Worm Fly |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.034 | Yeast Rat Worm Fly |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 148 | 0.034 | Yeast Worm |
| multi organism reproductive process | GO:0044703 | 262 | 0.034 | Yeast |
| cation transport | GO:0006812 | 382 | 0.034 | |
| regulation of phosphorus metabolic process | GO:0051174 | 349 | 0.033 | Rat Fly |
| amine metabolic process | GO:0009308 | 38 | 0.033 | |
| response to nutrient | GO:0007584 | 248 | 0.032 | |
| single organism reproductive process | GO:0044702 | 297 | 0.032 | Yeast Worm |
| epithelium development | GO:0060429 | 96 | 0.032 | |
| cellular response to organic cyclic compound | GO:0071407 | 202 | 0.032 | |
| reproductive process | GO:0022414 | 372 | 0.032 | Yeast Worm |
| anatomical structure morphogenesis | GO:0009653 | 298 | 0.031 | Yeast Rat Fly |
| positive regulation of cell death | GO:0010942 | 184 | 0.031 | Rat |
| response to estrogen | GO:0043627 | 232 | 0.030 | |
| cellular response to peptide | GO:1901653 | 133 | 0.030 | |
| regulation of protein metabolic process | GO:0051246 | 289 | 0.030 | Rat Fly |
| protein phosphorylation | GO:0006468 | 345 | 0.029 | |
| growth | GO:0040007 | 165 | 0.028 | Fly |
| cellular homeostasis | GO:0019725 | 252 | 0.028 | |
| regulation of system process | GO:0044057 | 208 | 0.028 | |
| positive regulation of cell development | GO:0010720 | 176 | 0.027 | Rat |
| cellular response to stress | GO:0033554 | 269 | 0.027 | Yeast Rat Worm Fly |
| negative regulation of metabolic process | GO:0009892 | 331 | 0.027 | Rat |
| neuron death | GO:0070997 | 127 | 0.027 | |
| regulation of cell differentiation | GO:0045595 | 320 | 0.026 | Yeast Rat |
| response to carbohydrate | GO:0009743 | 183 | 0.026 | Rat |
| response to estradiol | GO:0032355 | 164 | 0.026 | |
| cellular response to cytokine stimulus | GO:0071345 | 127 | 0.026 | Rat |
| negative regulation of apoptotic process | GO:0043066 | 181 | 0.026 | Rat |
| circulatory system development | GO:0072359 | 134 | 0.026 | Fly |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 197 | 0.025 | Yeast Rat Worm |
| negative regulation of programmed cell death | GO:0043069 | 183 | 0.025 | Rat |
| cell morphogenesis | GO:0000902 | 142 | 0.025 | Rat |
| negative regulation of biosynthetic process | GO:0009890 | 168 | 0.025 | Rat |
| defense response | GO:0006952 | 194 | 0.024 | Rat Worm Fly |
| tissue development | GO:0009888 | 252 | 0.024 | |
| regulation of neuron death | GO:1901214 | 115 | 0.024 | |
| regulation of cell morphogenesis involved in differentiation | GO:0010769 | 72 | 0.024 | Rat |
| positive regulation of developmental process | GO:0051094 | 283 | 0.024 | Rat Fly |
| response to other organism | GO:0051707 | 220 | 0.023 | Rat Worm Fly |
| regulation of multicellular organismal development | GO:2000026 | 376 | 0.023 | Fly |
| protein complex subunit organization | GO:0071822 | 302 | 0.023 | Rat |
| negative regulation of neurogenesis | GO:0050768 | 78 | 0.023 | |
| neuron differentiation | GO:0030182 | 368 | 0.023 | Rat |
| regulation of nervous system development | GO:0051960 | 264 | 0.023 | |
| positive regulation of cellular component organization | GO:0051130 | 200 | 0.023 | Rat |
| positive regulation of apoptotic process | GO:0043065 | 154 | 0.023 | Rat |
| anion transport | GO:0006820 | 178 | 0.023 | Rat |
| rna metabolic process | GO:0016070 | 406 | 0.022 | Yeast Rat Worm |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.022 | |
| regulation of neuron differentiation | GO:0045664 | 208 | 0.022 | |
| gonad development | GO:0008406 | 104 | 0.022 | Worm |
| cell morphogenesis involved in differentiation | GO:0000904 | 119 | 0.022 | Rat |
| intracellular signal transduction | GO:0035556 | 314 | 0.022 | |
| inorganic ion transmembrane transport | GO:0098660 | 229 | 0.022 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.021 | Yeast Worm |
| cellular response to steroid hormone stimulus | GO:0071383 | 93 | 0.021 | |
| negative regulation of cell development | GO:0010721 | 82 | 0.021 | |
| negative regulation of cellular metabolic process | GO:0031324 | 281 | 0.021 | Rat |
| neuron apoptotic process | GO:0051402 | 88 | 0.021 | |
| regulation of cell projection organization | GO:0031344 | 175 | 0.021 | |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.021 | |
| carboxylic acid biosynthetic process | GO:0046394 | 83 | 0.021 | Rat |
| macromolecular complex assembly | GO:0065003 | 273 | 0.021 | Rat |
| regulation of secretion | GO:0051046 | 224 | 0.021 | Rat |
| oxoacid metabolic process | GO:0043436 | 290 | 0.020 | Rat |
| positive regulation of protein metabolic process | GO:0051247 | 178 | 0.020 | Rat Fly |
| negative regulation of response to stimulus | GO:0048585 | 155 | 0.020 | Fly |
| positive regulation of signaling | GO:0023056 | 270 | 0.020 | |
| negative regulation of neuron death | GO:1901215 | 69 | 0.020 | |
| small molecule biosynthetic process | GO:0044283 | 124 | 0.020 | Rat |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 141 | 0.020 | Rat |
| response to hexose | GO:0009746 | 144 | 0.020 | Rat |
| positive regulation of catalytic activity | GO:0043085 | 184 | 0.019 | Rat |
| multi multicellular organism process | GO:0044706 | 138 | 0.019 | |
| response to metal ion | GO:0010038 | 253 | 0.019 | Fly |
| positive regulation of transferase activity | GO:0051347 | 81 | 0.019 | |
| head development | GO:0060322 | 247 | 0.019 | |
| cellular response to acid chemical | GO:0071229 | 75 | 0.019 | |
| response to growth factor | GO:0070848 | 189 | 0.019 | Rat Fly |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.019 | Yeast Rat Worm Fly |
| hormone secretion | GO:0046879 | 115 | 0.019 | |
| tube development | GO:0035295 | 89 | 0.018 | |
| positive regulation of protein modification process | GO:0031401 | 142 | 0.018 | Rat Fly |
| anion transmembrane transport | GO:0098656 | 77 | 0.018 | |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.018 | |
| monovalent inorganic cation transport | GO:0015672 | 172 | 0.017 | |
| cellular response to organonitrogen compound | GO:0071417 | 197 | 0.017 | |
| negative regulation of neuron differentiation | GO:0045665 | 62 | 0.017 | |
| positive regulation of transcription dna templated | GO:0045893 | 197 | 0.017 | Yeast Rat Worm |
| nitrogen compound transport | GO:0071705 | 229 | 0.017 | |
| positive regulation of map kinase activity | GO:0043406 | 46 | 0.017 | |
| regulation of secretion by cell | GO:1903530 | 208 | 0.017 | |
| cellular component assembly | GO:0022607 | 360 | 0.017 | Yeast Rat |
| cell communication involved in cardiac conduction | GO:0086065 | 2 | 0.017 | |
| reproductive structure development | GO:0048608 | 128 | 0.017 | Worm |
| positive regulation of multicellular organismal process | GO:0051240 | 387 | 0.017 | Human Rat Fly |
| regulation of neurogenesis | GO:0050767 | 247 | 0.017 | |
| neuron projection development | GO:0031175 | 273 | 0.017 | Rat |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.017 | |
| lipid transport | GO:0006869 | 61 | 0.017 | Rat |
| regulation of hormone levels | GO:0010817 | 187 | 0.017 | |
| organic acid transport | GO:0015849 | 116 | 0.017 | Rat |
| cellular component movement | GO:0006928 | 248 | 0.017 | Rat |
| positive regulation of cell proliferation | GO:0008284 | 249 | 0.016 | |
| organophosphate biosynthetic process | GO:0090407 | 143 | 0.016 | |
| response to transition metal nanoparticle | GO:1990267 | 122 | 0.016 | |
| metal ion homeostasis | GO:0055065 | 186 | 0.016 | |
| inflammatory response | GO:0006954 | 150 | 0.016 | Rat |
| regulation of ion transport | GO:0043269 | 245 | 0.016 | Rat |
| cellular calcium ion homeostasis | GO:0006874 | 160 | 0.016 | |
| metanephric comma shaped body morphogenesis | GO:0072278 | 2 | 0.016 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.016 | Yeast Rat |
| regulation of cellular protein metabolic process | GO:0032268 | 267 | 0.016 | Rat Fly |
| learning or memory | GO:0007611 | 90 | 0.016 | |
| response to molecule of bacterial origin | GO:0002237 | 194 | 0.016 | Rat |
| regulation of phosphate metabolic process | GO:0019220 | 349 | 0.016 | Rat Fly |
| response to amino acid | GO:0043200 | 75 | 0.016 | |
| cellular response to insulin stimulus | GO:0032869 | 81 | 0.015 | |
| axis specification | GO:0009798 | 4 | 0.015 | |
| leukocyte activation | GO:0045321 | 76 | 0.015 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 161 | 0.015 | Rat |
| negative regulation of rna biosynthetic process | GO:1902679 | 118 | 0.015 | Rat |
| multicellular organismal response to stress | GO:0033555 | 25 | 0.015 | |
| regulation of signal transduction | GO:0009966 | 318 | 0.015 | Rat Fly |
| response to wounding | GO:0009611 | 254 | 0.015 | |
| camera type eye development | GO:0043010 | 48 | 0.015 | |
| positive regulation of programmed cell death | GO:0043068 | 157 | 0.015 | Rat |
| positive regulation of rna metabolic process | GO:0051254 | 203 | 0.015 | Yeast Rat Worm |
| cellular response to growth factor stimulus | GO:0071363 | 162 | 0.015 | Rat Fly |
| regulation of protein phosphorylation | GO:0001932 | 183 | 0.015 | Rat Fly |
| sex differentiation | GO:0007548 | 113 | 0.015 | Worm |
| regulation of map kinase activity | GO:0043405 | 53 | 0.015 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 260 | 0.015 | Rat |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.014 | |
| multicellular organism reproduction | GO:0032504 | 233 | 0.014 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 141 | 0.014 | Yeast Rat |
| urogenital system development | GO:0001655 | 78 | 0.014 | |
| cellular response to oxidative stress | GO:0034599 | 76 | 0.014 | Fly |
| sensory perception | GO:0007600 | 101 | 0.014 | |
| metestrus | GO:0060210 | 1 | 0.014 | |
| cell cell signaling | GO:0007267 | 335 | 0.014 | Fly |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.014 | |
| regulation of purine nucleotide biosynthetic process | GO:1900371 | 46 | 0.014 | |
| secretion | GO:0046903 | 307 | 0.014 | Rat |
| response to acid chemical | GO:0001101 | 222 | 0.014 | |
| salivary gland development | GO:0007431 | 3 | 0.014 | |
| lipid biosynthetic process | GO:0008610 | 128 | 0.014 | Rat |
| organophosphate metabolic process | GO:0019637 | 370 | 0.014 | |
| negative regulation of cell proliferation | GO:0008285 | 119 | 0.014 | |
| regulation of molecular function | GO:0065009 | 398 | 0.013 | Rat |
| protein oligomerization | GO:0051259 | 191 | 0.013 | |
| male sex differentiation | GO:0046661 | 64 | 0.013 | |
| muscle system process | GO:0003012 | 115 | 0.013 | |
| cellular response to external stimulus | GO:0071496 | 118 | 0.013 | |
| regulation of kinase activity | GO:0043549 | 117 | 0.013 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.013 | Rat |
| positive regulation of response to stimulus | GO:0048584 | 285 | 0.013 | |
| cellular component morphogenesis | GO:0032989 | 155 | 0.013 | Yeast Rat |
| neuron projection morphogenesis | GO:0048812 | 122 | 0.013 | |
| negative regulation of extrinsic apoptotic signaling pathway | GO:2001237 | 4 | 0.013 | |
| negative regulation of nervous system development | GO:0051961 | 79 | 0.013 | |
| cation homeostasis | GO:0055080 | 195 | 0.013 | |
| regulation of establishment of planar polarity | GO:0090175 | 2 | 0.013 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.012 | Rat |
| regulation of catalytic activity | GO:0050790 | 304 | 0.012 | Rat |
| reproduction | GO:0000003 | 245 | 0.012 | Yeast Worm |
| action potential | GO:0001508 | 54 | 0.012 | |
| hematopoietic progenitor cell differentiation | GO:0002244 | 2 | 0.012 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 148 | 0.012 | Rat |
| regulation of protein kinase activity | GO:0045859 | 105 | 0.012 | |
| regulation of hormone secretion | GO:0046883 | 106 | 0.012 | |
| blood circulation | GO:0008015 | 183 | 0.012 | |
| secretion by cell | GO:0032940 | 248 | 0.012 | |
| response to camp | GO:0051591 | 91 | 0.012 | |
| negative regulation of developmental process | GO:0051093 | 125 | 0.012 | Yeast |
| regulation of dna metabolic process | GO:0051052 | 60 | 0.012 | Yeast Rat |
| positive regulation of protein kinase activity | GO:0045860 | 73 | 0.012 | |
| regulation of defense response | GO:0031347 | 68 | 0.012 | Fly |
| response to glucose | GO:0009749 | 136 | 0.012 | Rat |
| nucleoside phosphate biosynthetic process | GO:1901293 | 102 | 0.012 | |
| cell activation | GO:0001775 | 97 | 0.012 | |
| positive regulation of neurogenesis | GO:0050769 | 165 | 0.012 | |
| nucleoside phosphate metabolic process | GO:0006753 | 283 | 0.012 | |
| female pregnancy | GO:0007565 | 122 | 0.011 | |
| cation transmembrane transport | GO:0098655 | 263 | 0.011 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 167 | 0.011 | Rat Fly |
| eye development | GO:0001654 | 50 | 0.011 | |
| epithelial cell differentiation | GO:0030855 | 71 | 0.011 | |
| odontogenesis | GO:0042476 | 32 | 0.011 | |
| cell projection morphogenesis | GO:0048858 | 123 | 0.011 | |
| positive regulation of hormone secretion | GO:0046887 | 65 | 0.011 | |
| negative regulation of rna metabolic process | GO:0051253 | 123 | 0.011 | Rat |
| cellular response to nitrogen compound | GO:1901699 | 210 | 0.011 | |
| male gonad development | GO:0008584 | 59 | 0.011 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 262 | 0.011 | Rat Fly |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 75 | 0.011 | Rat |
| negative regulation of transcription dna templated | GO:0045892 | 116 | 0.011 | Rat |
| regeneration | GO:0031099 | 163 | 0.011 | |
| regulation of cellular component organization | GO:0051128 | 368 | 0.011 | Rat Fly |
| cellular metal ion homeostasis | GO:0006875 | 172 | 0.011 | |
| embryonic pattern specification | GO:0009880 | 1 | 0.011 | |
| heart process | GO:0003015 | 57 | 0.011 | |
| calcium ion homeostasis | GO:0055074 | 162 | 0.011 | |
| anterior posterior pattern specification | GO:0009952 | 1 | 0.011 | |
| negative regulation of molecular function | GO:0044092 | 133 | 0.011 | |
| cellular response to glucocorticoid stimulus | GO:0071385 | 68 | 0.011 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 80 | 0.011 | |
| cellular ion homeostasis | GO:0006873 | 184 | 0.011 | |
| transmembrane transport | GO:0055085 | 412 | 0.011 | |
| peptidyl tyrosine phosphorylation | GO:0018108 | 72 | 0.011 | |
| alcohol metabolic process | GO:0006066 | 77 | 0.011 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.010 | |
| dendrite development | GO:0016358 | 72 | 0.010 | |
| membrane organization | GO:0061024 | 94 | 0.010 | |
| cytoplasmic transport | GO:0016482 | 115 | 0.010 | Rat |
| ribose phosphate biosynthetic process | GO:0046390 | 87 | 0.010 | |
| chemosensory behavior | GO:0007635 | 2 | 0.010 | |
| regulation of transferase activity | GO:0051338 | 123 | 0.010 | |
| negative regulation of innate immune response | GO:0045824 | 4 | 0.010 | |
| heart contraction | GO:0060047 | 57 | 0.010 | |
| cellular response to transforming growth factor beta stimulus | GO:0071560 | 41 | 0.010 | Fly |
| organonitrogen compound biosynthetic process | GO:1901566 | 167 | 0.010 | |
| positive regulation of cell projection organization | GO:0031346 | 111 | 0.010 | |
| muscle structure development | GO:0061061 | 87 | 0.010 | |
| regulation of odontogenesis | GO:0042481 | 4 | 0.010 | |
| response to decreased oxygen levels | GO:0036293 | 237 | 0.010 | |
| response to oxygen levels | GO:0070482 | 265 | 0.010 | |
| vitamin transport | GO:0051180 | 14 | 0.010 | |
| protein complex assembly | GO:0006461 | 263 | 0.010 | Rat |
| positive regulation of cell differentiation | GO:0045597 | 217 | 0.010 | Rat |
| protein processing | GO:0016485 | 68 | 0.010 | Rat |
