Rattus norvegicus

12 known processes

Plod3

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

(Aliases: MGC93055)

Plod3 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
chemical homeostasisGO:00488782920.191
cellular response to endogenous stimulusGO:00714953770.168
regulation of phosphate metabolic processGO:00192203490.161
cell cell signalingGO:00072673350.148
positive regulation of programmed cell deathGO:00430681570.134
positive regulation of nitrogen compound metabolic processGO:00511733340.123
macromolecular complex subunit organizationGO:00439333390.118
Mouse
ion homeostasisGO:00508012120.113
nucleotide metabolic processGO:00091172790.098
regulation of cellular localizationGO:00603412630.097
cellular homeostasisGO:00197252520.095
positive regulation of cell communicationGO:00106472710.094
positive regulation of phosphate metabolic processGO:00459372620.086
nucleobase containing small molecule metabolic processGO:00550863160.082
cellular response to oxygen containing compoundGO:19017013860.081
regulation of protein metabolic processGO:00512462890.081
protein complex subunit organizationGO:00718223020.079
Mouse
cellular calcium ion homeostasisGO:00068741600.077
positive regulation of nucleobase containing compound metabolic processGO:00459353190.076
programmed cell deathGO:00125013920.076
homeostatic processGO:00425923310.076
regulation of cell differentiationGO:00455953200.071
cation transportGO:00068123820.070
intracellular signal transductionGO:00355563140.070
macromolecular complex assemblyGO:00650032730.068
positive regulation of phosphorus metabolic processGO:00105622620.068
metal ion transportGO:00300012890.068
regulation of signal transductionGO:00099663180.067
regulation of rna metabolic processGO:00512523910.067
cellular divalent inorganic cation homeostasisGO:00725031620.065
cellular cation homeostasisGO:00300031800.064
response to hypoxiaGO:00016662310.063
Rat
nucleoside phosphate metabolic processGO:00067532830.062
metal ion homeostasisGO:00550651860.062
regulation of apoptotic processGO:00429813350.062
organonitrogen compound catabolic processGO:19015651790.060
regulation of phosphorus metabolic processGO:00511743490.059
calcium ion homeostasisGO:00550741620.058
positive regulation of multicellular organismal processGO:00512403870.057
secretionGO:00469033070.057
cellular chemical homeostasisGO:00550822470.057
transmembrane transportGO:00550854120.057
regulation of cellular component organizationGO:00511283680.055
regulation of cellular protein metabolic processGO:00322682670.054
macromolecule localizationGO:00330362520.054
Mouse
behaviorGO:00076102050.053
positive regulation of developmental processGO:00510942830.052
regulation of protein localizationGO:0032880810.052
regulation of programmed cell deathGO:00430673410.051
peptidyl lysine hydroxylationGO:001718510.050
Rat
organophosphate metabolic processGO:00196373700.050
apoptotic processGO:00069153810.050
positive regulation of response to stimulusGO:00485842850.049
regulation of secretion by cellGO:19035302080.049
tissue developmentGO:00098882520.049
Mouse
positive regulation of phosphorylationGO:00423271770.049
negative regulation of metabolic processGO:00098923310.048
head developmentGO:00603222470.048
positive regulation of cell deathGO:00109421840.048
cell migrationGO:00164771970.048
response to estrogenGO:00436272320.047
synaptic transmissionGO:00072682350.047
g protein coupled receptor signaling pathwayGO:00071862420.047
rna metabolic processGO:00160704060.046
organic substance catabolic processGO:19015753160.045
positive regulation of signal transductionGO:00099671750.045
response to woundingGO:00096112540.044
cellular component assemblyGO:00226073600.044
Mouse
regulation of secretionGO:00510462240.044
purine containing compound metabolic processGO:00725212530.044
response to ketoneGO:19016541820.043
positive regulation of rna metabolic processGO:00512542030.043
positive regulation of molecular functionGO:00440932300.043
cation homeostasisGO:00550801950.042
positive regulation of secretion by cellGO:19035321280.042
regulation of mapk cascadeGO:00434081160.041
ribose phosphate metabolic processGO:00196932350.041
single organism intracellular transportGO:19025821660.041
response to inorganic substanceGO:00100353770.041
secretion by cellGO:00329402480.041
positive regulation of cellular biosynthetic processGO:00313282950.040
cellular metal ion homeostasisGO:00068751720.040
divalent inorganic cation homeostasisGO:00725071650.039
regulation of cell proliferationGO:00421273590.039
protein phosphorylationGO:00064683450.038
organonitrogen compound biosynthetic processGO:19015661670.038
carbohydrate derivative metabolic processGO:19011353460.038
protein complex assemblyGO:00064612630.037
positive regulation of cytosolic calcium ion concentrationGO:00072041220.037
localization of cellGO:00516742020.037
regulation of catalytic activityGO:00507903040.037
cell morphogenesisGO:00009021420.036
Mouse
protein complex biogenesisGO:00702712630.036
response to growth factorGO:00708481890.035
agingGO:00075682410.035
cytosolic calcium ion homeostasisGO:00514801400.035
response to decreased oxygen levelsGO:00362932370.035
Rat
positive regulation of neurogenesisGO:00507691650.034
transmembrane receptor protein tyrosine kinase signaling pathwayGO:0007169850.034
mapk cascadeGO:00001651400.034
rna biosynthetic processGO:00327743800.033
positive regulation of cellular component organizationGO:00511302000.032
positive regulation of cell developmentGO:00107201760.032
anatomical structure morphogenesisGO:00096532980.032
Mouse
positive regulation of cell differentiationGO:00455972170.031
positive regulation of signalingGO:00230562700.031
protein localizationGO:00081041910.031
Mouse
regulation of nucleic acid templated transcriptionGO:19035063800.031
inorganic ion transmembrane transportGO:00986602290.031
circulatory system developmentGO:00723591340.031
regulation of rna biosynthetic processGO:20011413810.031
regulation of system processGO:00440572080.031
positive regulation of protein modification processGO:00314011420.030
central nervous system developmentGO:00074173110.030
regulation of transcription dna templatedGO:00063553740.030
epithelium developmentGO:0060429960.030
Mouse
cellular ion homeostasisGO:00068731840.030
cellular response to stressGO:00335542690.030
neurological system processGO:00508772190.030
regulation of calcium ion transportGO:0051924770.029
purine ribonucleotide metabolic processGO:00091502270.029
negative regulation of signalingGO:00230571570.029
positive regulation of protein phosphorylationGO:00019341350.029
regulation of transcription from rna polymerase ii promoterGO:00063572340.029
ribonucleotide metabolic processGO:00092592310.028
ion transmembrane transportGO:00342203650.028
response to metal ionGO:00100382530.028
regulation of protein phosphorylationGO:00019321830.028
regulation of transferase activityGO:00513381230.028
positive regulation of transportGO:00510502450.028
negative regulation of cellular metabolic processGO:00313242810.028
protein transportGO:00150311320.027
regulation of multicellular organismal developmentGO:20000263760.027
cellular component biogenesisGO:00440853680.026
Mouse
positive regulation of intracellular signal transductionGO:19025331380.026
purine nucleotide metabolic processGO:00061632290.026
cellular response to hormone stimulusGO:00328702470.026
regulation of nervous system developmentGO:00519602640.026
cell projection organizationGO:00300303020.026
locomotionGO:00400112370.026
regulation of protein transportGO:0051223680.026
transcription dna templatedGO:00063513770.026
establishment of protein localizationGO:00451841410.026
regulation of protein modification processGO:00313991940.026
ribonucleoside catabolic processGO:00424541260.026
gliogenesisGO:0042063930.025
carbohydrate derivative catabolic processGO:19011361470.025
protein oligomerizationGO:00512591910.025
positive regulation of purine nucleotide metabolic processGO:1900544910.025
cell activationGO:0001775970.025
positive regulation of gene expressionGO:00106282440.025
regulation of intracellular signal transductionGO:19025312180.025
regulation of metal ion transportGO:00109591180.025
positive regulation of nucleotide metabolic processGO:0045981910.025
positive regulation of cell projection organizationGO:00313461110.025
cell morphogenesis involved in differentiationGO:00009041190.024
Mouse
nucleoside triphosphate catabolic processGO:00091431230.024
brain developmentGO:00074202470.024
lipid biosynthetic processGO:00086101280.024
transcription from rna polymerase ii promoterGO:00063662520.024
amine metabolic processGO:0009308380.024
positive regulation of biosynthetic processGO:00098913190.023
neuron differentiationGO:00301823680.023
regulation of body fluid levelsGO:0050878900.023
response to ammonium ionGO:0060359710.023
nitrogen compound transportGO:00717052290.023
cellular amide metabolic processGO:0043603440.023
positive regulation of cellular protein metabolic processGO:00322701670.023
regulation of phosphorylationGO:00423252480.023
response to nutrient levelsGO:00316673700.023
lipid metabolic processGO:00066292830.023
hormone secretionGO:00468791150.023
organelle organizationGO:00069962660.023
signal transduction by phosphorylationGO:00230141440.023
negative regulation of cellular biosynthetic processGO:00313271610.023
regulation of ion transportGO:00432692450.023
positive regulation of apoptotic processGO:00430651540.022
nucleoside catabolic processGO:00091641260.022
positive regulation of secretionGO:00510471400.022
cellular nitrogen compound catabolic processGO:00442701630.022
regulation of nucleotide metabolic processGO:00061401170.022
regulation of synaptic transmissionGO:00508041410.022
circulatory system processGO:00030131830.022
Mouse
single organism biosynthetic processGO:00447113420.022
response to estradiolGO:00323551640.022
cell part morphogenesisGO:00329901230.022
regulation of homeostatic processGO:00328441010.022
response to alkaloidGO:00432791320.022
proteolysisGO:00065081750.021
catabolic processGO:00090563510.021
regulation of cell morphogenesisGO:0022604770.021
cell junction organizationGO:0034330210.021
inorganic cation transmembrane transportGO:00986622020.021
divalent metal ion transportGO:00708381320.021
male mating behaviorGO:006017930.021
purine ribonucleotide catabolic processGO:00091541360.021
cellular catabolic processGO:00442482950.020
ribonucleotide catabolic processGO:00092611360.020
regulation of protein kinase activityGO:00458591050.020
purine nucleotide catabolic processGO:00061951360.020
response to oxidative stressGO:00069791860.020
regulation of hormone levelsGO:00108171870.020
purine ribonucleoside metabolic processGO:00461281680.020
positive regulation of macromolecule biosynthetic processGO:00105572470.020
cyclic nucleotide metabolic processGO:0009187800.020
nucleoside phosphate catabolic processGO:19012921400.020
single organism cellular localizationGO:19025801020.020
negative regulation of transportGO:00510511360.019
ras protein signal transductionGO:0007265290.019
monovalent inorganic cation transportGO:00156721720.019
response to carbohydrateGO:00097431830.019
organophosphate biosynthetic processGO:00904071430.019
nucleic acid templated transcriptionGO:00976593790.019
glycosyl compound metabolic processGO:19016571820.019
cellular response to organonitrogen compoundGO:00714171970.019
vesicle mediated transportGO:00161921810.019
divalent inorganic cation transportGO:00725111340.019
cellular amino acid metabolic processGO:00065201070.019
positive regulation of hormone secretionGO:0046887650.019
regulation of establishment of protein localizationGO:0070201690.019
negative regulation of cell deathGO:00605482290.019
single organism catabolic processGO:00447122830.019
negative regulation of cell communicationGO:00106481580.019
intracellular transportGO:00469071850.019
purine nucleoside catabolic processGO:00061521240.019
neuron deathGO:00709971270.019
small gtpase mediated signal transductionGO:0007264360.018
protein heterooligomerizationGO:0051291890.018
regulation of molecular functionGO:00650093980.018
reproductive processGO:00224143720.018
Fly
muscle structure developmentGO:0061061870.018
positive regulation of kinase activityGO:0033674770.018
synaptic growth at neuromuscular junctionGO:005112410.018
muscle system processGO:00030121150.018
regulation of proteasomal protein catabolic processGO:006113640.018
organophosphate catabolic processGO:00464341480.018
calcium ion transportGO:00068161310.018
carbohydrate derivative biosynthetic processGO:19011371240.017
negative regulation of transcription from rna polymerase ii promoterGO:0000122750.017
response to external biotic stimulusGO:00432072210.017
response to transition metal nanoparticleGO:19902671220.017
response to other organismGO:00517072200.017
dendrite developmentGO:0016358720.017
cell adhesionGO:00071551100.017
positive regulation of catalytic activityGO:00430851840.017
intracellular protein transportGO:0006886790.017
response to extracellular stimulusGO:00099913800.017
ribonucleoside triphosphate metabolic processGO:00091991410.016
response to peptide hormoneGO:00434342780.016
negative regulation of multicellular organismal processGO:00512412030.016
response to bacteriumGO:00096172000.016
activation of protein kinase activityGO:0032147470.016
negative regulation of macromolecule metabolic processGO:00106052600.016
response to cytokineGO:00340972150.016
peptidyl amino acid modificationGO:00181931260.016
Rat
regulation of cell projection organizationGO:00313441750.016
cell projection morphogenesisGO:00488581230.016
cell motilityGO:00488702020.016
hormone transportGO:00099141210.016
negative regulation of nitrogen compound metabolic processGO:00511721610.016
hemidesmosome assemblyGO:003158110.016
regulation of growthGO:00400081050.016
positive regulation of neuron differentiationGO:00456661260.016
regulation of catabolic processGO:00098941130.016
organic acid metabolic processGO:00060822920.016
peptide metabolic processGO:0006518320.015
nucleoside triphosphate metabolic processGO:00091411440.015
female pregnancyGO:00075651220.015
multi organism reproductive processGO:00447032620.015
Fly
nuclear transportGO:0051169490.015
camp metabolic processGO:0046058630.015
positive regulation of transferase activityGO:0051347810.015
positive regulation of cellular amino acid metabolic processGO:004576410.015
cellular component morphogenesisGO:00329891550.015
Mouse
purine ribonucleoside catabolic processGO:00461301240.015
gastrulationGO:000736920.015
positive regulation of neuron projection developmentGO:0010976990.015
aromatic compound catabolic processGO:00194391680.015
response to acid chemicalGO:00011012220.015
single organism behaviorGO:00447081300.015
signal releaseGO:00230611450.015
regulation of cyclic nucleotide metabolic processGO:0030799510.015
maintenance of locationGO:0051235170.015
negative regulation of macromolecule biosynthetic processGO:00105581480.015
regulation of dendrite developmentGO:0050773590.014
cation transmembrane transportGO:00986552630.014
negative regulation of nucleic acid templated transcriptionGO:19035071170.014
dephosphorylationGO:0016311980.014
cellular response to growth factor stimulusGO:00713631620.014
cardiovascular system developmentGO:00723581340.014
biological adhesionGO:00226101100.014
reactive oxygen species metabolic processGO:0072593370.014
cellular component movementGO:00069282480.014
positive regulation of cellular amine metabolic processGO:003324030.014
regulation of cellular catabolic processGO:00313291010.014
negative regulation of protein metabolic processGO:00512481140.014
regulation of cell motilityGO:20001451310.014
cellular response to nitrogen compoundGO:19016992100.014
purine ribonucleotide biosynthetic processGO:0009152810.014
positive regulation of nervous system developmentGO:00519621780.014
negative regulation of nucleobase containing compound metabolic processGO:00459341530.014
positive regulation of protein kinase activityGO:0045860730.014
multicellular organism growthGO:003526410.014
coagulationGO:0050817280.014
cytoplasmic transportGO:00164821150.014
olfactory behaviorGO:004204820.014
regulation of anatomical structure morphogenesisGO:00226031410.014
response to toxic substanceGO:00096361330.013
potassium ion transportGO:0006813970.013
regulation of hydrolase activityGO:00513361430.013
neuron developmentGO:00486662860.013
positive regulation of transcription dna templatedGO:00458931970.013
nucleobase containing compound catabolic processGO:00346551520.013
positive regulation of mapk cascadeGO:0043410920.013
organic cyclic compound catabolic processGO:19013611750.013
inflammatory responseGO:00069541500.013
regulation of cell developmentGO:00602842630.013
adult locomotory behaviorGO:000834440.013
cellular response to metal ionGO:0071248550.013
regulation of neuron differentiationGO:00456642080.013
ribonucleoside metabolic processGO:00091191740.013
negative regulation of response to stimulusGO:00485851550.013
reproductionGO:00000032450.013
Fly
carboxylic acid metabolic processGO:00197522890.013
response to oxygen levelsGO:00704822650.013
Rat
endocytosisGO:0006897840.013
positive regulation of immunoglobulin productionGO:000263940.013
negative regulation of apoptotic processGO:00430661810.013
regulation of kinase activityGO:00435491170.013
regulation of membrane potentialGO:00423911100.013
purine ribonucleoside triphosphate metabolic processGO:00092051400.012
regulation of neuron deathGO:19012141150.012
response to fatty acidGO:0070542650.012
regulation of purine nucleotide metabolic processGO:19005421150.012
multicellular organismal reproductive processGO:00486092330.012
Fly
response to corticosteroidGO:00319602350.012
purine nucleoside triphosphate metabolic processGO:00091441410.012
response to glucoseGO:00097491360.012
regulation of cellular amine metabolic processGO:003323880.012
regulation of protein secretionGO:0050708280.012
sensory perceptionGO:00076001010.012
regulation of cellular amino acid metabolic processGO:000652120.012
sequestering of calcium ionGO:005120880.011
negative regulation of transcription dna templatedGO:00458921160.011
regulation of mrna splicing via spliceosomeGO:004802430.011
glycosyl compound catabolic processGO:19016581260.011
cilium morphogenesisGO:006027120.011
nucleotide catabolic processGO:00091661390.011
positive regulation of catabolic processGO:0009896780.011
axis specificationGO:000979840.011
positive regulation of rna biosynthetic processGO:19026801970.011
regulation of tube sizeGO:0035150890.011
Mouse
nucleotide biosynthetic processGO:0009165980.011
negative regulation of rna metabolic processGO:00512531230.011
cellular amine metabolic processGO:0044106380.011
regulation of muscle system processGO:0090257790.011
positive regulation of gtpase activityGO:0043547470.011
actin filament based processGO:0030029860.011
cytoskeleton organizationGO:00070101110.011
cellular response to peptideGO:19016531330.011
negative regulation of biosynthetic processGO:00098901680.011
neuron projection developmentGO:00311752730.011
cellular response to oxygen levelsGO:0071453600.011
growthGO:00400071650.011
Fly
cellular macromolecule localizationGO:00707271220.011
taxisGO:0042330670.011
negative regulation of cellular protein metabolic processGO:00322691060.011
purine nucleotide biosynthetic processGO:0006164830.010
positive regulation of cellular catabolic processGO:0031331710.010
glucose homeostasisGO:0042593750.010
positive regulation of cell migrationGO:0030335960.010
negative regulation of rna splicingGO:003311930.010
positive regulation of nucleoside metabolic processGO:0045979550.010
negative regulation of cellular macromolecule biosynthetic processGO:20001131410.010
protein homooligomerizationGO:0051260910.010
heart morphogenesisGO:000300730.010
heterocycle catabolic processGO:00467001670.010
platelet aggregationGO:007052740.010
regulation of vesicle mediated transportGO:0060627810.010
peptide transportGO:0015833970.010
positive regulation of hydrolase activityGO:0051345860.010
single organism cell adhesionGO:0098602460.010
nucleocytoplasmic transportGO:0006913480.010
cellular response to inorganic substanceGO:0071241650.010

Plod3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
musculoskeletal system diseaseDOID:1700.111
disease of anatomical entityDOID:700.111
nervous system diseaseDOID:86300.046
muscle tissue diseaseDOID:6600.028
muscular diseaseDOID:008000000.028
sensory system diseaseDOID:005015500.018
central nervous system diseaseDOID:33100.013
disease of cellular proliferationDOID:1456600.012
bone diseaseDOID:008000100.012
connective tissue diseaseDOID:6500.012
neuropathyDOID:87000.011
cancerDOID:16200.011
organ system cancerDOID:005068600.011
myopathyDOID:42300.011