| modification dependent protein catabolic process | GO:0019941 | 14 | 0.928 | Yeast |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 19 | 0.902 | Yeast |
| modification dependent macromolecule catabolic process | GO:0043632 | 14 | 0.882 | Yeast |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 7 | 0.793 | Yeast |
| ubiquitin dependent protein catabolic process | GO:0006511 | 14 | 0.722 | Yeast |
| cellular protein catabolic process | GO:0044257 | 19 | 0.630 | Yeast |
| proteasomal protein catabolic process | GO:0010498 | 8 | 0.536 | Yeast |
| regulation of nucleic acid templated transcription | GO:1903506 | 380 | 0.388 | |
| macromolecule catabolic process | GO:0009057 | 58 | 0.338 | Yeast |
| protein catabolic process | GO:0030163 | 30 | 0.299 | Yeast |
| catabolic process | GO:0009056 | 351 | 0.291 | Yeast |
| rna biosynthetic process | GO:0032774 | 380 | 0.255 | |
| regulation of rna metabolic process | GO:0051252 | 391 | 0.225 | |
| cellular catabolic process | GO:0044248 | 295 | 0.216 | Yeast |
| cellular response to stress | GO:0033554 | 269 | 0.173 | |
| transcription dna templated | GO:0006351 | 377 | 0.168 | |
| cellular macromolecule catabolic process | GO:0044265 | 29 | 0.157 | Yeast |
| regulation of cell maturation | GO:1903429 | 3 | 0.154 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 148 | 0.147 | |
| organic substance catabolic process | GO:1901575 | 316 | 0.139 | Yeast |
| proteolysis | GO:0006508 | 175 | 0.134 | Yeast |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 140 | 0.104 | |
| nucleic acid templated transcription | GO:0097659 | 379 | 0.100 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 252 | 0.100 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 141 | 0.097 | |
| regulation of rna biosynthetic process | GO:2001141 | 381 | 0.096 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 334 | 0.095 | |
| organic cyclic compound catabolic process | GO:1901361 | 175 | 0.089 | |
| protein complex biogenesis | GO:0070271 | 263 | 0.081 | Yeast |
| rna metabolic process | GO:0016070 | 406 | 0.059 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 161 | 0.058 | |
| negative regulation of response to stimulus | GO:0048585 | 155 | 0.056 | |
| programmed cell death | GO:0012501 | 392 | 0.053 | |
| macromolecular complex assembly | GO:0065003 | 273 | 0.052 | Yeast |
| nucleoside phosphate catabolic process | GO:1901292 | 140 | 0.052 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 161 | 0.052 | |
| negative regulation of transcription dna templated | GO:0045892 | 116 | 0.052 | |
| single organism reproductive process | GO:0044702 | 297 | 0.052 | Worm |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 141 | 0.051 | |
| cellular response to peptide | GO:1901653 | 133 | 0.051 | |
| negative regulation of rna metabolic process | GO:0051253 | 123 | 0.051 | |
| positive regulation of transcription dna templated | GO:0045893 | 197 | 0.051 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 144 | 0.050 | |
| ribonucleoside catabolic process | GO:0042454 | 126 | 0.049 | |
| embryo development | GO:0009790 | 49 | 0.048 | Worm |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 319 | 0.047 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 75 | 0.047 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 295 | 0.046 | |
| homeostatic process | GO:0042592 | 331 | 0.046 | |
| negative regulation of biosynthetic process | GO:0009890 | 168 | 0.045 | |
| purine nucleoside catabolic process | GO:0006152 | 124 | 0.044 | |
| regulation of transcription dna templated | GO:0006355 | 374 | 0.042 | |
| single organism catabolic process | GO:0044712 | 283 | 0.042 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 197 | 0.042 | |
| mitotic spindle organization | GO:0007052 | 2 | 0.041 | |
| protein complex subunit organization | GO:0071822 | 302 | 0.040 | Yeast |
| ribose phosphate metabolic process | GO:0019693 | 235 | 0.040 | |
| nucleotide catabolic process | GO:0009166 | 139 | 0.039 | |
| purine nucleotide catabolic process | GO:0006195 | 136 | 0.039 | |
| carbohydrate derivative metabolic process | GO:1901135 | 346 | 0.039 | |
| purine containing compound catabolic process | GO:0072523 | 138 | 0.038 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 117 | 0.038 | |
| response to wounding | GO:0009611 | 254 | 0.038 | |
| glycosyl compound catabolic process | GO:1901658 | 126 | 0.037 | |
| cellular response to dna damage stimulus | GO:0006974 | 19 | 0.036 | |
| nucleoside catabolic process | GO:0009164 | 126 | 0.036 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 197 | 0.035 | |
| cell morphogenesis involved in differentiation | GO:0000904 | 119 | 0.034 | |
| adult locomotory behavior | GO:0008344 | 4 | 0.034 | |
| positive regulation of rna metabolic process | GO:0051254 | 203 | 0.034 | |
| dna templated transcription initiation | GO:0006352 | 4 | 0.034 | |
| cellular response to hormone stimulus | GO:0032870 | 247 | 0.033 | |
| nucleosome organization | GO:0034728 | 1 | 0.033 | |
| positive regulation of biosynthetic process | GO:0009891 | 319 | 0.033 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 123 | 0.033 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 260 | 0.032 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 153 | 0.032 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 247 | 0.031 | |
| cellular component assembly | GO:0022607 | 360 | 0.031 | Yeast |
| histone methylation | GO:0016571 | 3 | 0.031 | |
| cellular amino acid metabolic process | GO:0006520 | 107 | 0.031 | |
| carbohydrate derivative catabolic process | GO:1901136 | 147 | 0.031 | |
| synaptic growth at neuromuscular junction | GO:0051124 | 1 | 0.031 | |
| regulation of cellular component organization | GO:0051128 | 368 | 0.030 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 122 | 0.030 | |
| nucleoside metabolic process | GO:0009116 | 179 | 0.030 | |
| regulation of cellular amine metabolic process | GO:0033238 | 8 | 0.030 | |
| cellular response to oxygen containing compound | GO:1901701 | 386 | 0.029 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 2 | 0.029 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 3 | 0.029 | |
| ribonucleoside metabolic process | GO:0009119 | 174 | 0.028 | |
| regulation of molecular function | GO:0065009 | 398 | 0.028 | |
| regulation of response to wounding | GO:1903034 | 69 | 0.027 | |
| positive regulation of cellular component organization | GO:0051130 | 200 | 0.027 | |
| negative regulation of cellular metabolic process | GO:0031324 | 281 | 0.027 | |
| reproduction | GO:0000003 | 245 | 0.027 | Worm |
| embryonic pattern specification | GO:0009880 | 1 | 0.027 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 118 | 0.026 | |
| cellular component biogenesis | GO:0044085 | 368 | 0.026 | Yeast |
| cell morphogenesis | GO:0000902 | 142 | 0.025 | |
| response to acid chemical | GO:0001101 | 222 | 0.025 | |
| embryonic axis specification | GO:0000578 | 1 | 0.025 | |
| regulation of protein metabolic process | GO:0051246 | 289 | 0.025 | |
| cellular homeostasis | GO:0019725 | 252 | 0.025 | |
| purine ribonucleoside metabolic process | GO:0046128 | 168 | 0.024 | |
| heterocycle catabolic process | GO:0046700 | 167 | 0.024 | |
| peptidyl amino acid modification | GO:0018193 | 126 | 0.024 | |
| ribonucleotide metabolic process | GO:0009259 | 231 | 0.024 | |
| organophosphate catabolic process | GO:0046434 | 148 | 0.023 | |
| response to biotic stimulus | GO:0009607 | 226 | 0.023 | |
| multicellular organismal reproductive process | GO:0048609 | 233 | 0.023 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 27 | 0.022 | |
| regulation of cellular protein metabolic process | GO:0032268 | 267 | 0.021 | |
| negative regulation of signaling | GO:0023057 | 157 | 0.021 | |
| aging | GO:0007568 | 241 | 0.021 | |
| cellular ketone metabolic process | GO:0042180 | 51 | 0.021 | |
| cellular amine metabolic process | GO:0044106 | 38 | 0.021 | |
| negative regulation of multicellular organismal process | GO:0051241 | 203 | 0.021 | |
| purine ribonucleotide metabolic process | GO:0009150 | 227 | 0.021 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 56 | 0.021 | |
| regulation of phosphorylation | GO:0042325 | 248 | 0.021 | |
| blood vessel morphogenesis | GO:0048514 | 58 | 0.020 | |
| response to external biotic stimulus | GO:0043207 | 221 | 0.020 | |
| macromolecule localization | GO:0033036 | 252 | 0.020 | |
| immune system process | GO:0002376 | 204 | 0.020 | |
| single organism organelle organization | GO:1902589 | 180 | 0.020 | |
| apoptotic process | GO:0006915 | 381 | 0.020 | |
| reproductive process | GO:0022414 | 372 | 0.019 | Worm |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 234 | 0.019 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 163 | 0.019 | |
| regulation of cellular component biogenesis | GO:0044087 | 86 | 0.019 | |
| purine nucleoside metabolic process | GO:0042278 | 169 | 0.019 | |
| spindle organization | GO:0007051 | 2 | 0.018 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 122 | 0.018 | |
| amine metabolic process | GO:0009308 | 38 | 0.018 | |
| response to other organism | GO:0051707 | 220 | 0.018 | |
| cytoskeleton dependent cytokinesis | GO:0061640 | 2 | 0.018 | |
| negative regulation of cell death | GO:0060548 | 229 | 0.018 | |
| cellular response to nitrogen compound | GO:1901699 | 210 | 0.017 | |
| positive regulation of protein metabolic process | GO:0051247 | 178 | 0.017 | |
| regulation of phosphorus metabolic process | GO:0051174 | 349 | 0.017 | |
| regulation of immune system process | GO:0002682 | 123 | 0.017 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 55 | 0.017 | |
| atp metabolic process | GO:0046034 | 72 | 0.017 | |
| regulation of cellular catabolic process | GO:0031329 | 101 | 0.017 | |
| cellular component morphogenesis | GO:0032989 | 155 | 0.017 | |
| nucleotide metabolic process | GO:0009117 | 279 | 0.017 | |
| blood circulation | GO:0008015 | 183 | 0.016 | |
| cell cell signaling | GO:0007267 | 335 | 0.016 | |
| purine nucleotide metabolic process | GO:0006163 | 229 | 0.016 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 148 | 0.016 | |
| anterior posterior pattern specification | GO:0009952 | 1 | 0.016 | |
| nucleoside phosphate metabolic process | GO:0006753 | 283 | 0.016 | |
| multi organism reproductive process | GO:0044703 | 262 | 0.016 | |
| establishment of protein localization | GO:0045184 | 141 | 0.016 | |
| response to hexose | GO:0009746 | 144 | 0.016 | |
| regulation of protein modification process | GO:0031399 | 194 | 0.016 | |
| regulation of proteasomal protein catabolic process | GO:0061136 | 4 | 0.016 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 84 | 0.016 | |
| histone modification | GO:0016570 | 30 | 0.015 | |
| development of primary sexual characteristics | GO:0045137 | 107 | 0.015 | Worm |
| neuron projection development | GO:0031175 | 273 | 0.015 | |
| magnesium ion homeostasis | GO:0010960 | 2 | 0.015 | |
| cellular response to organonitrogen compound | GO:0071417 | 197 | 0.015 | |
| carbohydrate metabolic process | GO:0005975 | 130 | 0.015 | |
| negative regulation of gene expression | GO:0010629 | 199 | 0.015 | |
| response to oxidative stress | GO:0006979 | 186 | 0.015 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 84 | 0.015 | |
| negative regulation of cell differentiation | GO:0045596 | 99 | 0.015 | |
| positive regulation of catalytic activity | GO:0043085 | 184 | 0.015 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 316 | 0.015 | |
| organic acid metabolic process | GO:0006082 | 292 | 0.015 | |
| transmembrane transport | GO:0055085 | 412 | 0.014 | |
| central nervous system development | GO:0007417 | 311 | 0.014 | |
| mitotic cell cycle process | GO:1903047 | 35 | 0.014 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 55 | 0.014 | |
| purine ribonucleotide catabolic process | GO:0009154 | 136 | 0.014 | |
| behavior | GO:0007610 | 205 | 0.014 | |
| purine containing compound metabolic process | GO:0072521 | 253 | 0.014 | |
| single organism behavior | GO:0044708 | 130 | 0.014 | |
| synaptic transmission | GO:0007268 | 235 | 0.014 | |
| response to peptide | GO:1901652 | 292 | 0.014 | |
| regulation of defense response | GO:0031347 | 68 | 0.013 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 3 | 0.013 | |
| sex differentiation | GO:0007548 | 113 | 0.013 | Worm |
| neuron differentiation | GO:0030182 | 368 | 0.013 | |
| response to corticosteroid | GO:0031960 | 235 | 0.013 | |
| regulation of transcription elongation from rna polymerase ii promoter | GO:0034243 | 4 | 0.013 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 93 | 0.013 | |
| chromatin assembly or disassembly | GO:0006333 | 1 | 0.013 | |
| positive regulation of gene expression | GO:0010628 | 244 | 0.013 | |
| cellular copper ion homeostasis | GO:0006878 | 4 | 0.013 | |
| renal absorption | GO:0070293 | 4 | 0.013 | |
| chromatin modification | GO:0016568 | 33 | 0.012 | |
| dna metabolic process | GO:0006259 | 96 | 0.012 | |
| secretion | GO:0046903 | 307 | 0.012 | |
| regulation of catabolic process | GO:0009894 | 113 | 0.012 | |
| positive regulation of molecular function | GO:0044093 | 230 | 0.012 | |
| glycosyl compound metabolic process | GO:1901657 | 182 | 0.012 | |
| growth | GO:0040007 | 165 | 0.012 | |
| multicellular organism reproduction | GO:0032504 | 233 | 0.012 | |
| regulation of programmed cell death | GO:0043067 | 341 | 0.012 | |
| mitochondrion organization | GO:0007005 | 35 | 0.012 | |
| response to hyperoxia | GO:0055093 | 45 | 0.012 | |
| inflammatory response | GO:0006954 | 150 | 0.012 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 141 | 0.012 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 3 | 0.012 | |
| gonad development | GO:0008406 | 104 | 0.012 | Worm |
| peptidyl cysteine modification | GO:0018198 | 2 | 0.012 | |
| response to peptide hormone | GO:0043434 | 278 | 0.012 | |
| response to carbohydrate | GO:0009743 | 183 | 0.012 | |
| protein prenylation | GO:0018342 | 4 | 0.012 | |
| anatomical structure morphogenesis | GO:0009653 | 298 | 0.012 | |
| organophosphate metabolic process | GO:0019637 | 370 | 0.011 | |
| negative regulation of molecular function | GO:0044092 | 133 | 0.011 | |
| protein localization | GO:0008104 | 191 | 0.011 | |
| regulation of growth | GO:0040008 | 105 | 0.011 | |
| response to ketone | GO:1901654 | 182 | 0.011 | |
| guanosine containing compound catabolic process | GO:1901069 | 71 | 0.011 | |
| regulation of ion transmembrane transport | GO:0034765 | 121 | 0.011 | |
| developmental growth | GO:0048589 | 100 | 0.011 | |
| small gtpase mediated signal transduction | GO:0007264 | 36 | 0.011 | |
| palate development | GO:0060021 | 2 | 0.011 | |
| positive regulation of cell proliferation | GO:0008284 | 249 | 0.011 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 124 | 0.011 | |
| response to oxygen levels | GO:0070482 | 265 | 0.011 | |
| locomotion | GO:0040011 | 237 | 0.011 | Worm |
| chemical homeostasis | GO:0048878 | 292 | 0.011 | |
| organelle organization | GO:0006996 | 266 | 0.011 | |
| male gamete generation | GO:0048232 | 99 | 0.011 | |
| immune response | GO:0006955 | 104 | 0.010 | |
| protein localization to organelle | GO:0033365 | 57 | 0.010 | |
| response to monosaccharide | GO:0034284 | 159 | 0.010 | |
| aromatic compound catabolic process | GO:0019439 | 168 | 0.010 | |
| regulation of embryonic development | GO:0045995 | 2 | 0.010 | |
| regulation of intracellular signal transduction | GO:1902531 | 218 | 0.010 | |
| multicellular organism growth | GO:0035264 | 1 | 0.010 | |
| regulation of hydrolase activity | GO:0051336 | 143 | 0.010 | |
