| mrna metabolic process | GO:0016071 | 269 | 0.888 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 89 | 0.692 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.644 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.517 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.510 | |
| rna localization | GO:0006403 | 112 | 0.468 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.456 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.453 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.450 | |
| nuclear transcribed mrna catabolic process deadenylation dependent decay | GO:0000288 | 44 | 0.403 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.358 | |
| rna catabolic process | GO:0006401 | 118 | 0.352 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.254 | |
| organelle assembly | GO:0070925 | 118 | 0.219 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.206 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.194 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.168 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 194 | 0.129 | |
| rrna transport | GO:0051029 | 18 | 0.126 | |
| mrna catabolic process | GO:0006402 | 93 | 0.124 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.114 | |
| establishment of rna localization | GO:0051236 | 92 | 0.105 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.105 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.105 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.094 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.088 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.088 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.079 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.077 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.073 | |
| organelle fusion | GO:0048284 | 85 | 0.068 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.065 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.064 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 136 | 0.061 | |
| protein complex assembly | GO:0006461 | 302 | 0.057 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.052 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.051 | |
| regulation of dna templated transcription initiation | GO:2000142 | 19 | 0.049 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.049 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.047 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.047 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.044 | |
| trna processing | GO:0008033 | 101 | 0.044 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.044 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.043 | |
| regulation of nuclear division | GO:0051783 | 103 | 0.042 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.041 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.041 | |
| multi organism process | GO:0051704 | 233 | 0.040 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.040 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.038 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.035 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.035 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.034 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.033 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.032 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.032 | |
| single organism developmental process | GO:0044767 | 258 | 0.032 | |
| cellular developmental process | GO:0048869 | 191 | 0.032 | |
| establishment of protein localization | GO:0045184 | 367 | 0.032 | |
| dna conformation change | GO:0071103 | 98 | 0.032 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 89 | 0.032 | |
| nuclear transport | GO:0051169 | 165 | 0.031 | |
| positive regulation of mrna metabolic process | GO:1903313 | 7 | 0.031 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.030 | |
| regulation of cell division | GO:0051302 | 113 | 0.029 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.028 | |
| positive regulation of cellular catabolic process | GO:0031331 | 128 | 0.028 | |
| dna templated transcription initiation | GO:0006352 | 71 | 0.028 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.028 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.027 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.027 | |
| response to chemical | GO:0042221 | 390 | 0.027 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.027 | |
| single organism catabolic process | GO:0044712 | 619 | 0.026 | |
| rrna export from nucleus | GO:0006407 | 18 | 0.026 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.025 | |
| cell differentiation | GO:0030154 | 161 | 0.025 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.024 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 224 | 0.024 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.023 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.023 | |
| rna export from nucleus | GO:0006405 | 88 | 0.022 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.022 | |
| chromosome segregation | GO:0007059 | 159 | 0.022 | |
| growth | GO:0040007 | 157 | 0.022 | |
| translation | GO:0006412 | 230 | 0.020 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.020 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.020 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.020 | |
| ribosome localization | GO:0033750 | 46 | 0.020 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.019 | |
| positive regulation of dna templated transcription initiation | GO:2000144 | 13 | 0.019 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 224 | 0.019 | |
| regulation of translation | GO:0006417 | 89 | 0.018 | |
| translational initiation | GO:0006413 | 56 | 0.017 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.017 | |
| positive regulation of catabolic process | GO:0009896 | 135 | 0.017 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.016 | |
| regulation of mrna metabolic process | GO:1903311 | 17 | 0.016 | |
| dna recombination | GO:0006310 | 172 | 0.016 | |
| cell communication | GO:0007154 | 345 | 0.016 | |
| regulation of transcription initiation from rna polymerase ii promoter | GO:0060260 | 19 | 0.016 | |
| protein alkylation | GO:0008213 | 48 | 0.016 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.016 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.016 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.016 | |
| sexual reproduction | GO:0019953 | 216 | 0.016 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 224 | 0.016 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 262 | 0.016 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.016 | |
| gene silencing by rna | GO:0031047 | 3 | 0.015 | |
| atp metabolic process | GO:0046034 | 251 | 0.015 | |
| cellular ketone metabolic process | GO:0042180 | 63 | 0.015 | |
| membrane lipid biosynthetic process | GO:0046467 | 54 | 0.015 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.015 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.015 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.015 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.015 | |
| liposaccharide metabolic process | GO:1903509 | 31 | 0.015 | |
| nuclear export | GO:0051168 | 124 | 0.014 | |
| rna transport | GO:0050658 | 92 | 0.014 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.014 | |
| lipid metabolic process | GO:0006629 | 269 | 0.014 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.013 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.013 | |
| sexual sporulation resulting in formation of a cellular spore | GO:0043935 | 113 | 0.013 | |
| protein methylation | GO:0006479 | 48 | 0.013 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.012 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.012 | |
| protein ubiquitination | GO:0016567 | 118 | 0.012 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.012 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.012 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.012 | |
| rna splicing | GO:0008380 | 131 | 0.012 | |
| cell division | GO:0051301 | 205 | 0.011 | |
| regulation of multi organism process | GO:0043900 | 20 | 0.011 | |
| cytoplasmic mrna processing body assembly | GO:0033962 | 9 | 0.011 | |
| regulation of cellular amine metabolic process | GO:0033238 | 21 | 0.011 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 260 | 0.011 | |
| covalent chromatin modification | GO:0016569 | 119 | 0.011 | |
| dna duplex unwinding | GO:0032508 | 42 | 0.011 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.011 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.011 | |
| methylation | GO:0032259 | 101 | 0.011 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.010 | |
| pyridine containing compound metabolic process | GO:0072524 | 53 | 0.010 | |
| response to hypoxia | GO:0001666 | 4 | 0.010 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 224 | 0.010 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 267 | 0.010 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.010 | |
