| nucleophagy | GO:0044804 | 34 | 0.393 | |
| single organism membrane organization | GO:0044802 | 275 | 0.253 | |
| protein localization to organelle | GO:0033365 | 337 | 0.235 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.217 | |
| macroautophagy | GO:0016236 | 55 | 0.182 | |
| membrane invagination | GO:0010324 | 43 | 0.176 | |
| protein targeting | GO:0006605 | 272 | 0.175 | |
| protein transport | GO:0015031 | 345 | 0.151 | |
| protein targeting to vacuole | GO:0006623 | 91 | 0.141 | |
| single organism catabolic process | GO:0044712 | 619 | 0.141 | |
| protein localization to vacuole | GO:0072665 | 92 | 0.139 | |
| single organism cellular localization | GO:1902580 | 375 | 0.107 | |
| establishment of protein localization to vacuole | GO:0072666 | 91 | 0.105 | |
| intracellular protein transport | GO:0006886 | 319 | 0.101 | |
| cvt pathway | GO:0032258 | 37 | 0.100 | |
| establishment of protein localization | GO:0045184 | 367 | 0.098 | |
| autophagy | GO:0006914 | 106 | 0.093 | |
| late nucleophagy | GO:0044805 | 17 | 0.090 | |
| membrane organization | GO:0061024 | 276 | 0.090 | |
| coenzyme biosynthetic process | GO:0009108 | 66 | 0.089 | |
| vacuolar transport | GO:0007034 | 145 | 0.088 | |
| response to chemical | GO:0042221 | 390 | 0.086 | |
| nucleotide biosynthetic process | GO:0009165 | 79 | 0.077 | |
| cofactor biosynthetic process | GO:0051188 | 80 | 0.074 | |
| piecemeal microautophagy of nucleus | GO:0034727 | 33 | 0.070 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.064 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.059 | |
| lipoprotein biosynthetic process | GO:0042158 | 40 | 0.055 | |
| single organism membrane invagination | GO:1902534 | 43 | 0.052 | |
| response to starvation | GO:0042594 | 96 | 0.052 | |
| pyridine nucleotide biosynthetic process | GO:0019363 | 17 | 0.052 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.049 | |
| regulation of biological quality | GO:0065008 | 391 | 0.049 | |
| mitochondrion degradation | GO:0000422 | 29 | 0.045 | |
| cell communication | GO:0007154 | 345 | 0.045 | |
| microautophagy | GO:0016237 | 43 | 0.042 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.042 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.041 | |
| lipoprotein metabolic process | GO:0042157 | 40 | 0.040 | |
| single organism developmental process | GO:0044767 | 258 | 0.037 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.037 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.037 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.035 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.035 | |
| glycerophospholipid metabolic process | GO:0006650 | 98 | 0.034 | |
| autophagic vacuole assembly | GO:0000045 | 16 | 0.033 | |
| cellular response to nutrient levels | GO:0031669 | 144 | 0.033 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.033 | |
| vacuole organization | GO:0007033 | 75 | 0.032 | |
| response to external stimulus | GO:0009605 | 158 | 0.031 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.031 | |
| golgi vesicle transport | GO:0048193 | 188 | 0.031 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.030 | |
| translation | GO:0006412 | 230 | 0.030 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.030 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 80 | 0.029 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.029 | |
| coenzyme metabolic process | GO:0006732 | 104 | 0.029 | |
| signaling | GO:0023052 | 208 | 0.029 | |
| cellular response to starvation | GO:0009267 | 90 | 0.028 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.027 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.027 | |
| rrna metabolic process | GO:0016072 | 244 | 0.027 | |
| regulation of molecular function | GO:0065009 | 320 | 0.026 | |
| mitochondrial translation | GO:0032543 | 52 | 0.026 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.026 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.026 | |
| response to nutrient levels | GO:0031667 | 150 | 0.026 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.025 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.025 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.025 | |
| protein localization to pre autophagosomal structure | GO:0034497 | 7 | 0.025 | |
| nicotinamide nucleotide biosynthetic process | GO:0019359 | 16 | 0.025 | |
| organelle assembly | GO:0070925 | 118 | 0.025 | |
| developmental process | GO:0032502 | 261 | 0.023 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.023 | |
| protein lipidation | GO:0006497 | 40 | 0.023 | |
| trna metabolic process | GO:0006399 | 151 | 0.023 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.022 | |
| regulation of cell communication | GO:0010646 | 124 | 0.022 | |
| rrna processing | GO:0006364 | 227 | 0.022 | |
| telomere organization | GO:0032200 | 75 | 0.021 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.021 | |
| protein catabolic process | GO:0030163 | 221 | 0.021 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.021 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.021 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.021 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.021 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.020 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.020 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.020 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.020 | |
| homeostatic process | GO:0042592 | 227 | 0.020 | |
| lipid metabolic process | GO:0006629 | 269 | 0.020 | |
| phosphatidylinositol metabolic process | GO:0046488 | 62 | 0.019 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.019 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.019 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.019 | |
| telomere maintenance | GO:0000723 | 74 | 0.019 | |
| vesicle organization | GO:0016050 | 68 | 0.019 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.018 | |
| pyridine containing compound biosynthetic process | GO:0072525 | 24 | 0.018 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.018 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.018 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.018 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.018 | |
| c terminal protein lipidation | GO:0006501 | 6 | 0.018 | |
| rna modification | GO:0009451 | 99 | 0.018 | |
| transition metal ion homeostasis | GO:0055076 | 59 | 0.018 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.017 | |
| maintenance of protein location in cell | GO:0032507 | 50 | 0.017 | |
| vesicle docking | GO:0048278 | 16 | 0.017 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.017 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 73 | 0.017 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.017 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.017 | |
| proteolysis | GO:0006508 | 268 | 0.016 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.016 | |
| phosphorylation | GO:0016310 | 291 | 0.016 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 260 | 0.016 | |
| double strand break repair | GO:0006302 | 105 | 0.016 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.016 | |
| positive regulation of catabolic process | GO:0009896 | 135 | 0.016 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.016 | |
| alcohol metabolic process | GO:0006066 | 112 | 0.016 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.016 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.015 | |
| protein localization to membrane | GO:0072657 | 102 | 0.015 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.015 | |
| membrane docking | GO:0022406 | 22 | 0.015 | |
| nuclear transport | GO:0051169 | 165 | 0.015 | |
| iron ion homeostasis | GO:0055072 | 34 | 0.015 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.015 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.015 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.015 | |
| vacuole fusion | GO:0097576 | 40 | 0.015 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.015 | |
| c terminal protein amino acid modification | GO:0018410 | 8 | 0.015 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.015 | |
| peroxisome degradation | GO:0030242 | 22 | 0.015 | |
| establishment or maintenance of cell polarity | GO:0007163 | 96 | 0.015 | |
| ascospore type prospore assembly | GO:0031321 | 15 | 0.014 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.014 | |
| sulfur compound metabolic process | GO:0006790 | 95 | 0.014 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.014 | |
| phospholipid biosynthetic process | GO:0008654 | 89 | 0.014 | |
| reproductive process | GO:0022414 | 248 | 0.014 | |
| er associated ubiquitin dependent protein catabolic process | GO:0030433 | 46 | 0.014 | |
| cellular iron ion homeostasis | GO:0006879 | 34 | 0.014 | |
| cell fate commitment | GO:0045165 | 32 | 0.014 | |
| anatomical structure development | GO:0048856 | 160 | 0.014 | |
| methylation | GO:0032259 | 101 | 0.014 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.014 | |
| external encapsulating structure organization | GO:0045229 | 146 | 0.014 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.014 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.014 | |
| oxidoreduction coenzyme metabolic process | GO:0006733 | 58 | 0.014 | |
| dna recombination | GO:0006310 | 172 | 0.014 | |
| sexual sporulation | GO:0034293 | 113 | 0.013 | |
| alpha amino acid metabolic process | GO:1901605 | 124 | 0.013 | |
| ncrna processing | GO:0034470 | 330 | 0.013 | |
| protein import | GO:0017038 | 122 | 0.013 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 106 | 0.013 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 194 | 0.013 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.013 | |
| cell wall organization or biogenesis | GO:0071554 | 190 | 0.013 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.013 | |
| reciprocal dna recombination | GO:0035825 | 54 | 0.013 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.013 | |
| sexual reproduction | GO:0019953 | 216 | 0.013 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.013 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.013 | |
| mitochondrion organization | GO:0007005 | 261 | 0.012 | |
| nucleocytoplasmic transport | GO:0006913 | 163 | 0.012 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.012 | |
| maintenance of location | GO:0051235 | 66 | 0.012 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.012 | |
| ascospore formation | GO:0030437 | 107 | 0.012 | |
| glycerophospholipid biosynthetic process | GO:0046474 | 68 | 0.012 | |
| regulation of nucleotide metabolic process | GO:0006140 | 110 | 0.012 | |
| signal transduction | GO:0007165 | 208 | 0.012 | |
| microtubule based process | GO:0007017 | 117 | 0.012 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.012 | |
| rna catabolic process | GO:0006401 | 118 | 0.012 | |
| fungal type cell wall organization | GO:0031505 | 145 | 0.012 | |
| single organism nuclear import | GO:1902593 | 56 | 0.012 | |
| vacuole fusion non autophagic | GO:0042144 | 40 | 0.012 | |
| macromolecule methylation | GO:0043414 | 85 | 0.012 | |
| regulation of transport | GO:0051049 | 85 | 0.012 | |
| protein ubiquitination | GO:0016567 | 118 | 0.012 | |
| ribosome assembly | GO:0042255 | 57 | 0.012 | |
| regulation of cell cycle phase transition | GO:1901987 | 70 | 0.012 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.012 | |
| protein complex localization | GO:0031503 | 32 | 0.011 | |
| regulation of hydrolase activity | GO:0051336 | 133 | 0.011 | |
| chemical homeostasis | GO:0048878 | 137 | 0.011 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.011 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.011 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.011 | |
| dephosphorylation | GO:0016311 | 127 | 0.011 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.011 | |
| response to oxidative stress | GO:0006979 | 99 | 0.011 | |
| single organism reproductive process | GO:0044702 | 159 | 0.011 | |
| gene silencing | GO:0016458 | 151 | 0.011 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.011 | |
| regulation of localization | GO:0032879 | 127 | 0.011 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 224 | 0.011 | |
| peroxisome organization | GO:0007031 | 68 | 0.011 | |
| regulation of translation | GO:0006417 | 89 | 0.011 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.011 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 89 | 0.011 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 224 | 0.011 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.011 | |
| dna conformation change | GO:0071103 | 98 | 0.011 | |
| sporulation | GO:0043934 | 132 | 0.011 | |
| fungal type cell wall assembly | GO:0071940 | 53 | 0.011 | |
| pyridine nucleotide metabolic process | GO:0019362 | 45 | 0.011 | |
| cellular amino acid biosynthetic process | GO:0008652 | 118 | 0.011 | |
| organelle fusion | GO:0048284 | 85 | 0.011 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.010 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.010 | |
| ascospore wall assembly | GO:0030476 | 52 | 0.010 | |
| reproductive process in single celled organism | GO:0022413 | 145 | 0.010 | |
| protein maturation | GO:0051604 | 76 | 0.010 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.010 | |
| phosphatidylinositol biosynthetic process | GO:0006661 | 39 | 0.010 | |
| positive regulation of intracellular transport | GO:0032388 | 4 | 0.010 | |
| cell development | GO:0048468 | 107 | 0.010 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.010 | |
| regulation of macroautophagy | GO:0016241 | 15 | 0.010 | |
| mitochondrial genome maintenance | GO:0000002 | 40 | 0.010 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.010 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.010 | |
| mrna catabolic process | GO:0006402 | 93 | 0.010 | |
| positive regulation of hydrolase activity | GO:0051345 | 112 | 0.010 | |
| glycerolipid biosynthetic process | GO:0045017 | 71 | 0.010 | |
| endosomal transport | GO:0016197 | 86 | 0.010 | |
