| intracellular protein transport | GO:0006886 | 319 | 0.871 | |
| protein targeting to er | GO:0045047 | 39 | 0.839 | |
| glycoprotein biosynthetic process | GO:0009101 | 61 | 0.788 | |
| protein localization to endoplasmic reticulum | GO:0070972 | 47 | 0.749 | |
| establishment of protein localization to endoplasmic reticulum | GO:0072599 | 40 | 0.743 | |
| macromolecule glycosylation | GO:0043413 | 57 | 0.696 | |
| protein transmembrane transport | GO:0071806 | 82 | 0.670 | |
| glycosylation | GO:0070085 | 66 | 0.618 | |
| protein targeting to membrane | GO:0006612 | 52 | 0.591 | |
| establishment of protein localization | GO:0045184 | 367 | 0.587 | |
| protein n linked glycosylation | GO:0006487 | 34 | 0.583 | |
| protein transport | GO:0015031 | 345 | 0.546 | |
| transmembrane transport | GO:0055085 | 349 | 0.536 | |
| single organism cellular localization | GO:1902580 | 375 | 0.528 | |
| protein glycosylation | GO:0006486 | 57 | 0.527 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.488 | |
| protein targeting | GO:0006605 | 272 | 0.470 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.465 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.457 | |
| protein localization to organelle | GO:0033365 | 337 | 0.434 | |
| proteolysis | GO:0006508 | 268 | 0.426 | |
| posttranslational protein targeting to membrane | GO:0006620 | 17 | 0.425 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.392 | |
| single organism membrane organization | GO:0044802 | 275 | 0.391 | |
| membrane organization | GO:0061024 | 276 | 0.345 | |
| intracellular protein transmembrane transport | GO:0065002 | 80 | 0.312 | |
| er associated ubiquitin dependent protein catabolic process | GO:0030433 | 46 | 0.241 | |
| proteasomal protein catabolic process | GO:0010498 | 141 | 0.232 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.212 | |
| cotranslational protein targeting to membrane | GO:0006613 | 15 | 0.195 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.187 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.181 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.178 | |
| protein localization to membrane | GO:0072657 | 102 | 0.136 | |
| lipid metabolic process | GO:0006629 | 269 | 0.128 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.123 | |
| sexual reproduction | GO:0019953 | 216 | 0.106 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.105 | |
| phosphatidylinositol metabolic process | GO:0046488 | 62 | 0.104 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.096 | |
| lipoprotein biosynthetic process | GO:0042158 | 40 | 0.095 | |
| reproductive process | GO:0022414 | 248 | 0.087 | |
| glycolipid biosynthetic process | GO:0009247 | 28 | 0.086 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.086 | |
| gene silencing | GO:0016458 | 151 | 0.072 | |
| growth | GO:0040007 | 157 | 0.066 | Human |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 137 | 0.064 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.063 | |
| establishment of protein localization to membrane | GO:0090150 | 99 | 0.057 | |
| endoplasmic reticulum organization | GO:0007029 | 30 | 0.055 | Human |
| protein complex assembly | GO:0006461 | 302 | 0.054 | |
| glycoprotein metabolic process | GO:0009100 | 62 | 0.051 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.048 | |
| endomembrane system organization | GO:0010256 | 74 | 0.046 | Human |
| regulation of catalytic activity | GO:0050790 | 307 | 0.042 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.042 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.041 | |
| regulation of localization | GO:0032879 | 127 | 0.039 | Fly |
| organophosphate metabolic process | GO:0019637 | 597 | 0.037 | |
| single organism catabolic process | GO:0044712 | 619 | 0.034 | |
| external encapsulating structure organization | GO:0045229 | 146 | 0.033 | |
| glycerophospholipid metabolic process | GO:0006650 | 98 | 0.033 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.031 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.029 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.029 | |
| membrane budding | GO:0006900 | 22 | 0.027 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.027 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.027 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.026 | |
| membrane lipid biosynthetic process | GO:0046467 | 54 | 0.026 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.026 | |
| protein catabolic process | GO:0030163 | 221 | 0.026 | |
| protein import | GO:0017038 | 122 | 0.026 | |
| ion homeostasis | GO:0050801 | 118 | 0.025 | |
| lipid localization | GO:0010876 | 60 | 0.025 | |
| regulation of cellular response to stress | GO:0080135 | 50 | 0.025 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.024 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.024 | |
| conjugation | GO:0000746 | 107 | 0.024 | |
| multi organism process | GO:0051704 | 233 | 0.023 | Fly |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.023 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.022 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.022 | |
| response to misfolded protein | GO:0051788 | 11 | 0.022 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.021 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.021 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.021 | |
| cell wall organization | GO:0071555 | 146 | 0.021 | |
| regulation of biological quality | GO:0065008 | 391 | 0.021 | |
| regulation of molecular function | GO:0065009 | 320 | 0.020 | |
| glycerolipid biosynthetic process | GO:0045017 | 71 | 0.020 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.020 | |
| cell communication | GO:0007154 | 345 | 0.020 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.019 | |
| single organism developmental process | GO:0044767 | 258 | 0.019 | Worm Fly |
| response to chemical | GO:0042221 | 390 | 0.019 | |
| signal transduction | GO:0007165 | 208 | 0.019 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.019 | |
| fungal type cell wall organization or biogenesis | GO:0071852 | 169 | 0.019 | |
| positive regulation of hydrolase activity | GO:0051345 | 112 | 0.018 | |
| er nucleus signaling pathway | GO:0006984 | 23 | 0.018 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.017 | |
| developmental process | GO:0032502 | 261 | 0.017 | Worm Fly |
| fungal type cell wall organization | GO:0031505 | 145 | 0.017 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.017 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.017 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.017 | |
| single organism signaling | GO:0044700 | 208 | 0.017 | |
| maintenance of location | GO:0051235 | 66 | 0.016 | |
| regulation of hydrolase activity | GO:0051336 | 133 | 0.016 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.015 | |
| organelle localization | GO:0051640 | 128 | 0.015 | |
| response to topologically incorrect protein | GO:0035966 | 38 | 0.015 | |
| transition metal ion homeostasis | GO:0055076 | 59 | 0.015 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.015 | Fly |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.015 | |
| regulation of cellular localization | GO:0060341 | 50 | 0.015 | |
| golgi vesicle transport | GO:0048193 | 188 | 0.014 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.014 | Fly |
| positive regulation of molecular function | GO:0044093 | 185 | 0.014 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.014 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.014 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.014 | |
| conjugation with cellular fusion | GO:0000747 | 106 | 0.014 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.014 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.013 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.013 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 137 | 0.013 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.013 | |
| cell differentiation | GO:0030154 | 161 | 0.013 | Fly |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.013 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.013 | |
| srp dependent cotranslational protein targeting to membrane translocation | GO:0006616 | 9 | 0.012 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.012 | |
| multi organism cellular process | GO:0044764 | 120 | 0.012 | Fly |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.012 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.012 | |
| misfolded or incompletely synthesized protein catabolic process | GO:0006515 | 21 | 0.012 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.012 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.012 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.012 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.012 | |
| gpi anchor metabolic process | GO:0006505 | 28 | 0.012 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.012 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.011 | |
| cellular ion homeostasis | GO:0006873 | 112 | 0.011 | |
| alcohol metabolic process | GO:0006066 | 112 | 0.011 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.011 | |
| cellular response to topologically incorrect protein | GO:0035967 | 32 | 0.011 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 260 | 0.011 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.011 | |
| signaling | GO:0023052 | 208 | 0.011 | |
| protein o linked mannosylation | GO:0035269 | 7 | 0.011 | |
| cellular developmental process | GO:0048869 | 191 | 0.010 | Fly |
| protein maturation | GO:0051604 | 76 | 0.010 | |
| response to unfolded protein | GO:0006986 | 29 | 0.010 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.010 | |
| nucleus organization | GO:0006997 | 62 | 0.010 | |
| localization within membrane | GO:0051668 | 29 | 0.010 | |
