| dna repair | GO:0006281 | 236 | 1.000 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.999 | |
| double strand break repair | GO:0006302 | 105 | 0.991 | |
| recombinational repair | GO:0000725 | 64 | 0.990 | |
| double strand break repair via homologous recombination | GO:0000724 | 54 | 0.981 | |
| dna recombination | GO:0006310 | 172 | 0.975 | |
| nuclear division | GO:0000280 | 263 | 0.871 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.818 | |
| error prone translesion synthesis | GO:0042276 | 11 | 0.799 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.763 | |
| telomere maintenance | GO:0000723 | 74 | 0.739 | |
| dna replication | GO:0006260 | 147 | 0.739 | |
| dna conformation change | GO:0071103 | 98 | 0.704 | |
| negative regulation of cell cycle process | GO:0010948 | 86 | 0.699 | |
| negative regulation of cell cycle | GO:0045786 | 91 | 0.696 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.663 | |
| dna damage checkpoint | GO:0000077 | 29 | 0.661 | |
| organelle fission | GO:0048285 | 272 | 0.633 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.594 | |
| homeostatic process | GO:0042592 | 227 | 0.533 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.532 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 63 | 0.503 | |
| telomere organization | GO:0032200 | 75 | 0.502 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.497 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.496 | |
| cell cycle checkpoint | GO:0000075 | 82 | 0.486 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.459 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.410 | |
| postreplication repair | GO:0006301 | 24 | 0.385 | |
| chromatin silencing | GO:0006342 | 147 | 0.385 | |
| single organism developmental process | GO:0044767 | 258 | 0.377 | |
| negative regulation of organelle organization | GO:0010639 | 103 | 0.370 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 59 | 0.361 | |
| reproductive process | GO:0022414 | 248 | 0.351 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 260 | 0.351 | |
| meiosis i | GO:0007127 | 92 | 0.342 | |
| negative regulation of nuclear division | GO:0051784 | 62 | 0.305 | |
| double strand break repair via break induced replication | GO:0000727 | 25 | 0.294 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 194 | 0.290 | |
| negative regulation of cell division | GO:0051782 | 66 | 0.285 | |
| regulation of biological quality | GO:0065008 | 391 | 0.283 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.269 | |
| nucleotide excision repair | GO:0006289 | 50 | 0.264 | |
| dna dependent dna replication | GO:0006261 | 115 | 0.244 | |
| chromatin organization | GO:0006325 | 242 | 0.239 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 147 | 0.226 | |
| dna biosynthetic process | GO:0071897 | 33 | 0.214 | |
| negative regulation of cellular component organization | GO:0051129 | 109 | 0.197 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.193 | |
| mitotic sister chromatid segregation | GO:0000070 | 85 | 0.190 | |
| dna replication initiation | GO:0006270 | 48 | 0.182 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 57 | 0.180 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.179 | |
| cellular developmental process | GO:0048869 | 191 | 0.174 | |
| translesion synthesis | GO:0019985 | 16 | 0.171 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.160 | |
| gene silencing | GO:0016458 | 151 | 0.152 | |
| regulation of phosphorylation | GO:0042325 | 86 | 0.150 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.146 | |
| regulation of cell cycle process | GO:0010564 | 150 | 0.143 | |
| cell cycle phase transition | GO:0044770 | 144 | 0.140 | |
| regulation of cell division | GO:0051302 | 113 | 0.134 | |
| dna strand elongation | GO:0022616 | 29 | 0.132 | |
| regulation of cell cycle phase transition | GO:1901987 | 70 | 0.131 | |
| dna packaging | GO:0006323 | 55 | 0.124 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.123 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.120 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 68 | 0.117 | |
| cell differentiation | GO:0030154 | 161 | 0.116 | |
| regulation of meiotic cell cycle | GO:0051445 | 43 | 0.113 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.099 | |
| phosphorylation | GO:0016310 | 291 | 0.098 | |
| regulation of mitotic cell cycle | GO:0007346 | 107 | 0.097 | |
| negative regulation of meiotic cell cycle | GO:0051447 | 24 | 0.094 | |
| mitotic cell cycle checkpoint | GO:0007093 | 56 | 0.093 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.092 | |
| positive regulation of kinase activity | GO:0033674 | 24 | 0.091 | |
| developmental process | GO:0032502 | 261 | 0.089 | |
| anatomical structure homeostasis | GO:0060249 | 74 | 0.089 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.087 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.086 | |
| negative regulation of molecular function | GO:0044092 | 68 | 0.086 | |
| non recombinational repair | GO:0000726 | 33 | 0.082 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.082 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.081 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.076 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.076 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.076 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.075 | |
| regulation of kinase activity | GO:0043549 | 71 | 0.075 | |
| regulation of nuclear division | GO:0051783 | 103 | 0.073 | |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.071 | |
| regulation of meiosis | GO:0040020 | 42 | 0.068 | |
| atp metabolic process | GO:0046034 | 251 | 0.067 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.066 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.065 | |
| regulation of dna metabolic process | GO:0051052 | 100 | 0.065 | |
| cellular homeostasis | GO:0019725 | 138 | 0.064 | |
| negative regulation of meiosis | GO:0045835 | 23 | 0.064 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.063 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.061 | |
| regulation of molecular function | GO:0065009 | 320 | 0.059 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.059 | |
| mitotic nuclear division | GO:0007067 | 131 | 0.059 | |
| meiotic dna double strand break formation | GO:0042138 | 12 | 0.058 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.057 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.056 | |
| chromatin assembly or disassembly | GO:0006333 | 60 | 0.056 | |
| rdna condensation | GO:0070550 | 9 | 0.056 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.055 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.055 | |
| single organism reproductive process | GO:0044702 | 159 | 0.054 | |
| dna strand elongation involved in dna replication | GO:0006271 | 26 | 0.054 | |
| regulation of protein phosphorylation | GO:0001932 | 75 | 0.054 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.053 | |
| regulation of dna replication | GO:0006275 | 51 | 0.051 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.051 | |
| mitotic cell cycle phase transition | GO:0044772 | 141 | 0.051 | |
| dna integrity checkpoint | GO:0031570 | 41 | 0.050 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.049 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.048 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.047 | |
| mitotic recombination | GO:0006312 | 55 | 0.046 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.046 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.045 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.043 | |
| negative regulation of phosphorylation | GO:0042326 | 28 | 0.041 | |
| chromatin modification | GO:0016568 | 200 | 0.041 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.041 | |
| negative regulation of catalytic activity | GO:0043086 | 60 | 0.040 | |
| cell cycle dna replication | GO:0044786 | 36 | 0.040 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.037 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.037 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.036 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 262 | 0.035 | |
| protein monoubiquitination | GO:0006513 | 13 | 0.035 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.034 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.034 | |
| single organism catabolic process | GO:0044712 | 619 | 0.034 | |
| positive regulation of phosphorylation | GO:0042327 | 33 | 0.033 | |
| meiotic recombination checkpoint | GO:0051598 | 9 | 0.033 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 267 | 0.032 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.032 | |
| chemical homeostasis | GO:0048878 | 137 | 0.032 | |
| dna dependent dna replication maintenance of fidelity | GO:0045005 | 14 | 0.031 | |
| chromatin assembly | GO:0031497 | 35 | 0.031 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.031 | |
| lipid metabolic process | GO:0006629 | 269 | 0.031 | |
| regulation of dna recombination | GO:0000018 | 24 | 0.030 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.030 | |
| osmosensory signaling pathway | GO:0007231 | 22 | 0.030 | |
| negative regulation of dna metabolic process | GO:0051053 | 36 | 0.030 | |
| sexual reproduction | GO:0019953 | 216 | 0.030 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 89 | 0.030 | |
| reproductive process in single celled organism | GO:0022413 | 145 | 0.029 | |
| chromosome separation | GO:0051304 | 33 | 0.029 | |
| positive regulation of protein phosphorylation | GO:0001934 | 28 | 0.029 | |
| endosomal transport | GO:0016197 | 86 | 0.028 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.028 | |
| response to uv | GO:0009411 | 4 | 0.027 | |
| error free translesion synthesis | GO:0070987 | 9 | 0.027 | |
| cell aging | GO:0007569 | 70 | 0.027 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.026 | |
| regulation of dna dependent dna replication | GO:0090329 | 37 | 0.026 | |
| regulation of cellular component biogenesis | GO:0044087 | 112 | 0.026 | |
| regulation of dna dependent dna replication initiation | GO:0030174 | 21 | 0.026 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.025 | |
| regulation of signaling | GO:0023051 | 119 | 0.025 | |
| chromosome condensation | GO:0030261 | 19 | 0.025 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.025 | |
| double strand break repair via nonhomologous end joining | GO:0006303 | 27 | 0.025 | |
| regulation of cellular response to stress | GO:0080135 | 50 | 0.024 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.024 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.023 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.023 | |
| sister chromatid segregation | GO:0000819 | 93 | 0.023 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 49 | 0.023 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.023 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.023 | |
| mitotic dna damage checkpoint | GO:0044773 | 11 | 0.023 | |
| negative regulation of dna replication | GO:0008156 | 15 | 0.023 | |
| chromatin silencing at rdna | GO:0000183 | 32 | 0.022 | |
| telomere maintenance via telomere lengthening | GO:0010833 | 22 | 0.022 | |
| protein phosphorylation | GO:0006468 | 197 | 0.022 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 224 | 0.022 | |
| lagging strand elongation | GO:0006273 | 10 | 0.021 | |
| base excision repair | GO:0006284 | 14 | 0.021 | |
| g2 m transition of mitotic cell cycle | GO:0000086 | 38 | 0.021 | |
| cellular chemical homeostasis | GO:0055082 | 123 | 0.021 | |
| mating type determination | GO:0007531 | 32 | 0.020 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 224 | 0.020 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.020 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.020 | |
| reciprocal dna recombination | GO:0035825 | 54 | 0.019 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.019 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.019 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 262 | 0.019 | |
| telomere maintenance via telomerase | GO:0007004 | 21 | 0.019 | |
| response to chemical | GO:0042221 | 390 | 0.018 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.018 | |
| cell wall organization | GO:0071555 | 146 | 0.018 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.018 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.018 | |
| regulation of homeostatic process | GO:0032844 | 19 | 0.018 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.018 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.017 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.017 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 49 | 0.017 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.017 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.017 | |
| response to oxidative stress | GO:0006979 | 99 | 0.016 | |
| aging | GO:0007568 | 71 | 0.016 | |
| chromosome segregation | GO:0007059 | 159 | 0.016 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.016 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.016 | |
| regulation of hydrolase activity | GO:0051336 | 133 | 0.016 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.016 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.016 | |
| cytoskeleton organization | GO:0007010 | 230 | 0.016 | |
| cellular response to abiotic stimulus | GO:0071214 | 62 | 0.015 | |
| rna dependent dna replication | GO:0006278 | 25 | 0.015 | |
| regulation of intracellular signal transduction | GO:1902531 | 78 | 0.015 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.015 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 224 | 0.015 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.014 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.014 | |
| regulation of protein modification process | GO:0031399 | 110 | 0.013 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.013 | |
| dephosphorylation | GO:0016311 | 127 | 0.013 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 80 | 0.013 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.013 | |
| dna double strand break processing | GO:0000729 | 8 | 0.013 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.013 | |
| conjugation | GO:0000746 | 107 | 0.013 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 224 | 0.013 | |
| chromatin silencing at silent mating type cassette | GO:0030466 | 53 | 0.013 | |
| cell fate commitment | GO:0045165 | 32 | 0.013 | |
| negative regulation of cell communication | GO:0010648 | 33 | 0.013 | |
| meiotic cell cycle checkpoint | GO:0033313 | 10 | 0.012 | |
| cell morphogenesis | GO:0000902 | 30 | 0.012 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.012 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.012 | |
| regulation of transferase activity | GO:0051338 | 83 | 0.012 | |
| dna geometric change | GO:0032392 | 43 | 0.012 | |
| nucleocytoplasmic transport | GO:0006913 | 163 | 0.012 | |
| cell cycle g2 m phase transition | GO:0044839 | 39 | 0.012 | |
| growth of unicellular organism as a thread of attached cells | GO:0070783 | 105 | 0.012 | |
| mitotic dna integrity checkpoint | GO:0044774 | 18 | 0.012 | |
| positive regulation of protein metabolic process | GO:0051247 | 93 | 0.011 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.011 | |
| external encapsulating structure organization | GO:0045229 | 146 | 0.011 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.011 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.011 | |
| dna duplex unwinding | GO:0032508 | 42 | 0.011 | |
| protein localization to organelle | GO:0033365 | 337 | 0.011 | |
| atp dependent chromatin remodeling | GO:0043044 | 36 | 0.011 | |
| fatty acid metabolic process | GO:0006631 | 51 | 0.011 | |
| atp catabolic process | GO:0006200 | 224 | 0.011 | |
| posttranscriptional tethering of rna polymerase ii gene dna at nuclear periphery | GO:0000973 | 16 | 0.010 | |
| intracellular signal transduction | GO:0035556 | 112 | 0.010 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.010 | |
| cellular component morphogenesis | GO:0032989 | 97 | 0.010 | |
| translation | GO:0006412 | 230 | 0.010 | |
| regulation of protein complex assembly | GO:0043254 | 77 | 0.010 | |
