| golgi vesicle transport | GO:0048193 | 188 | 0.431 | |
| er to golgi vesicle mediated transport | GO:0006888 | 86 | 0.295 | |
| establishment of protein localization | GO:0045184 | 367 | 0.179 | |
| single organism cellular localization | GO:1902580 | 375 | 0.143 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.141 | |
| vacuolar transport | GO:0007034 | 145 | 0.083 | |
| single organism membrane organization | GO:0044802 | 275 | 0.077 | |
| membrane organization | GO:0061024 | 276 | 0.072 | |
| protein transport | GO:0015031 | 345 | 0.055 | |
| protein localization to membrane | GO:0072657 | 102 | 0.053 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.050 | |
| establishment of protein localization to membrane | GO:0090150 | 99 | 0.048 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.045 | |
| proteolysis | GO:0006508 | 268 | 0.042 | |
| protein localization to organelle | GO:0033365 | 337 | 0.041 | |
| organelle fusion | GO:0048284 | 85 | 0.038 | |
| rrna processing | GO:0006364 | 227 | 0.038 | |
| establishment of protein localization to vacuole | GO:0072666 | 91 | 0.038 | |
| maintenance of protein location | GO:0045185 | 53 | 0.035 | |
| single organism membrane fusion | GO:0044801 | 71 | 0.034 | |
| regulation of biological quality | GO:0065008 | 391 | 0.033 | |
| membrane fusion | GO:0061025 | 73 | 0.033 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.032 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.031 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.030 | |
| vesicle fusion | GO:0006906 | 33 | 0.029 | |
| response to chemical | GO:0042221 | 390 | 0.027 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.026 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.025 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.025 | |
| protein targeting | GO:0006605 | 272 | 0.025 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.025 | |
| mrna metabolic process | GO:0016071 | 269 | 0.024 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.024 | |
| single organism catabolic process | GO:0044712 | 619 | 0.023 | |
| snare complex assembly | GO:0035493 | 10 | 0.021 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.020 | |
| maintenance of location in cell | GO:0051651 | 58 | 0.020 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.020 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.020 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.018 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.018 | |
| protein targeting to vacuole | GO:0006623 | 91 | 0.018 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.018 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.017 | |
| regulation of molecular function | GO:0065009 | 320 | 0.017 | |
| reproductive process | GO:0022414 | 248 | 0.016 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.016 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.016 | |
| ribosomal large subunit biogenesis | GO:0042273 | 98 | 0.016 | |
| maintenance of protein location in cell | GO:0032507 | 50 | 0.016 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.015 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.015 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.015 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.015 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.014 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.014 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.014 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.014 | |
| response to organic substance | GO:0010033 | 182 | 0.014 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.014 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.013 | |
| cvt pathway | GO:0032258 | 37 | 0.013 | |
| protein complex disassembly | GO:0043241 | 70 | 0.013 | |
| chromosome segregation | GO:0007059 | 159 | 0.013 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.013 | |
| intracellular protein transport | GO:0006886 | 319 | 0.013 | |
| retrograde vesicle mediated transport golgi to er | GO:0006890 | 28 | 0.012 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.012 | |
| dna recombination | GO:0006310 | 172 | 0.012 | |
| protein targeting to membrane | GO:0006612 | 52 | 0.012 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.012 | |
| sexual sporulation | GO:0034293 | 113 | 0.012 | |
| single organism signaling | GO:0044700 | 208 | 0.012 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.012 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.012 | |
| single organism reproductive process | GO:0044702 | 159 | 0.012 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.012 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.011 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.011 | |
| protein localization to vacuole | GO:0072665 | 92 | 0.011 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.011 | |
| macromolecular complex disassembly | GO:0032984 | 80 | 0.011 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.011 | |
| response to topologically incorrect protein | GO:0035966 | 38 | 0.011 | |
| establishment of organelle localization | GO:0051656 | 96 | 0.011 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.011 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.011 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.011 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.010 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 137 | 0.010 | |
| cellular component disassembly | GO:0022411 | 86 | 0.010 | |
| rrna metabolic process | GO:0016072 | 244 | 0.010 | |
| protein catabolic process | GO:0030163 | 221 | 0.010 | |
| oxidation reduction process | GO:0055114 | 353 | 0.010 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.010 | |
| er associated ubiquitin dependent protein catabolic process | GO:0030433 | 46 | 0.010 | |
