| mrna splicing via spliceosome | GO:0000398 | 108 | 1.000 | |
| rna splicing via transesterification reactions | GO:0000375 | 118 | 1.000 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 109 | 1.000 | |
| rna splicing | GO:0008380 | 131 | 0.998 | |
| mrna processing | GO:0006397 | 185 | 0.997 | |
| mrna metabolic process | GO:0016071 | 269 | 0.996 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.788 | |
| spliceosomal conformational changes to generate catalytic conformation | GO:0000393 | 20 | 0.727 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.441 | |
| transmembrane transport | GO:0055085 | 349 | 0.275 | |
| generation of catalytic spliceosome for first transesterification step | GO:0000349 | 9 | 0.271 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.268 | |
| protein transport | GO:0015031 | 345 | 0.241 | |
| single organism membrane organization | GO:0044802 | 275 | 0.240 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.229 | |
| protein localization to organelle | GO:0033365 | 337 | 0.228 | |
| spliceosomal complex assembly | GO:0000245 | 21 | 0.180 | |
| intracellular protein transport | GO:0006886 | 319 | 0.176 | |
| establishment of protein localization to endoplasmic reticulum | GO:0072599 | 40 | 0.164 | |
| establishment of protein localization | GO:0045184 | 367 | 0.153 | |
| single organism signaling | GO:0044700 | 208 | 0.143 | |
| regulation of cell cycle process | GO:0010564 | 150 | 0.142 | |
| negative regulation of cell cycle | GO:0045786 | 91 | 0.138 | |
| cell communication | GO:0007154 | 345 | 0.134 | |
| protein targeting | GO:0006605 | 272 | 0.110 | |
| establishment of protein localization to membrane | GO:0090150 | 99 | 0.109 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.103 | |
| macromolecular complex disassembly | GO:0032984 | 80 | 0.101 | |
| protein localization to membrane | GO:0072657 | 102 | 0.098 | |
| protein localization to nucleus | GO:0034504 | 74 | 0.089 | |
| signal transduction | GO:0007165 | 208 | 0.088 | |
| nuclear division | GO:0000280 | 263 | 0.087 | |
| single organism catabolic process | GO:0044712 | 619 | 0.087 | |
| sulfur compound metabolic process | GO:0006790 | 95 | 0.081 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.076 | |
| membrane organization | GO:0061024 | 276 | 0.074 | |
| regulation of nuclear division | GO:0051783 | 103 | 0.070 | |
| regulation of localization | GO:0032879 | 127 | 0.068 | |
| mitotic cell cycle phase transition | GO:0044772 | 141 | 0.067 | |
| generation of catalytic spliceosome for second transesterification step | GO:0000350 | 9 | 0.066 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.064 | |
| regulation of cell cycle phase transition | GO:1901987 | 70 | 0.062 | |
| regulation of mitotic cell cycle | GO:0007346 | 107 | 0.061 | |
| signaling | GO:0023052 | 208 | 0.061 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.061 | |
| endomembrane system organization | GO:0010256 | 74 | 0.058 | |
| protein targeting to membrane | GO:0006612 | 52 | 0.058 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.056 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.056 | |
| proteolysis | GO:0006508 | 268 | 0.056 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 68 | 0.056 | |
| cellular component disassembly | GO:0022411 | 86 | 0.055 | |
| protein folding | GO:0006457 | 94 | 0.055 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.053 | |
| cell cycle checkpoint | GO:0000075 | 82 | 0.048 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.048 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.046 | |
| posttranslational protein targeting to membrane | GO:0006620 | 17 | 0.046 | |
| protein targeting to er | GO:0045047 | 39 | 0.046 | |
| dna damage checkpoint | GO:0000077 | 29 | 0.046 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.044 | |
| regulation of biological quality | GO:0065008 | 391 | 0.044 | |
| generation of precursor metabolites and energy | GO:0006091 | 147 | 0.043 | |
| positive regulation of cell cycle process | GO:0090068 | 31 | 0.041 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.041 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.041 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 59 | 0.041 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.040 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.040 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.040 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.040 | |
| regulation of signaling | GO:0023051 | 119 | 0.040 | |
| golgi vesicle transport | GO:0048193 | 188 | 0.040 | |
| secretion by cell | GO:0032940 | 50 | 0.038 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.038 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.037 | |
| single organism developmental process | GO:0044767 | 258 | 0.036 | |
| regulation of cellular localization | GO:0060341 | 50 | 0.036 | |
| ncrna processing | GO:0034470 | 330 | 0.035 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.035 | |
| secretion | GO:0046903 | 50 | 0.035 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.034 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.034 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.034 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.034 | |
| gene silencing | GO:0016458 | 151 | 0.034 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.033 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.033 | |
| response to external stimulus | GO:0009605 | 158 | 0.032 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.032 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.032 | |
| translation | GO:0006412 | 230 | 0.031 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.030 | |
| ribonucleoprotein complex disassembly | GO:0032988 | 11 | 0.030 | |
| positive regulation of cell cycle | GO:0045787 | 32 | 0.029 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.029 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.029 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.029 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.028 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.028 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.028 | |
| regulation of transport | GO:0051049 | 85 | 0.028 | |
| organelle fission | GO:0048285 | 272 | 0.027 | |
| regulation of dna dependent dna replication initiation | GO:0030174 | 21 | 0.027 | |
| external encapsulating structure organization | GO:0045229 | 146 | 0.026 | |
| negative regulation of cellular component organization | GO:0051129 | 109 | 0.026 | |
| protein complex assembly | GO:0006461 | 302 | 0.025 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.025 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.025 | |
| translational initiation | GO:0006413 | 56 | 0.025 | |
| regulation of cell communication | GO:0010646 | 124 | 0.025 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.025 | |
| maintenance of protein location | GO:0045185 | 53 | 0.025 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.025 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.025 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.024 | |
| dna integrity checkpoint | GO:0031570 | 41 | 0.024 | |
| dna dependent dna replication | GO:0006261 | 115 | 0.024 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 136 | 0.023 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.023 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.023 | |
| atp metabolic process | GO:0046034 | 251 | 0.023 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 64 | 0.023 | |
| negative regulation of cell cycle process | GO:0010948 | 86 | 0.022 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.022 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.022 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 224 | 0.022 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.022 | |
| endocytosis | GO:0006897 | 90 | 0.021 | |
| regulation of response to dna damage stimulus | GO:2001020 | 17 | 0.021 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.021 | |
| cell cycle phase transition | GO:0044770 | 144 | 0.021 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.021 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.021 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.020 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 267 | 0.020 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.020 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.020 | |
| cell division | GO:0051301 | 205 | 0.019 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.019 | |
| protein dna complex assembly | GO:0065004 | 105 | 0.019 | |
| regulation of translation | GO:0006417 | 89 | 0.019 | |
| endosomal transport | GO:0016197 | 86 | 0.019 | |
| rrna processing | GO:0006364 | 227 | 0.018 | |
| regulation of mitosis | GO:0007088 | 65 | 0.018 | |
| positive regulation of carbohydrate metabolic process | GO:0045913 | 13 | 0.018 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.017 | |
| dephosphorylation | GO:0016311 | 127 | 0.017 | |
| reproductive process in single celled organism | GO:0022413 | 145 | 0.017 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.017 | |
| response to osmotic stress | GO:0006970 | 83 | 0.017 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.017 | |
| response to nutrient levels | GO:0031667 | 150 | 0.017 | |
| protein dna complex subunit organization | GO:0071824 | 153 | 0.017 | |
| dna replication initiation | GO:0006270 | 48 | 0.017 | |
| maintenance of protein location in cell | GO:0032507 | 50 | 0.016 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.016 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.016 | |
| regulation of metal ion transport | GO:0010959 | 2 | 0.016 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.016 | |
| regulation of meiotic cell cycle | GO:0051445 | 43 | 0.016 | |
| mitochondrion organization | GO:0007005 | 261 | 0.016 | |
| small molecule biosynthetic process | GO:0044283 | 258 | 0.016 | |
| negative regulation of organelle organization | GO:0010639 | 103 | 0.016 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 224 | 0.015 | |
| regulation of response to stress | GO:0080134 | 57 | 0.015 | |
| cellular amide metabolic process | GO:0043603 | 59 | 0.015 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.015 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.015 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.015 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.015 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.015 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.014 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 224 | 0.014 | |
| peroxisome organization | GO:0007031 | 68 | 0.014 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.014 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.014 | |
| response to temperature stimulus | GO:0009266 | 74 | 0.014 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.014 | |
| cellular carbohydrate metabolic process | GO:0044262 | 135 | 0.013 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.013 | |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.013 | |
| regulation of meiosis | GO:0040020 | 42 | 0.013 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.013 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.013 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.013 | |
| protein localization to mitochondrion | GO:0070585 | 63 | 0.013 | |
| regulation of cell division | GO:0051302 | 113 | 0.012 | |
| cell differentiation | GO:0030154 | 161 | 0.012 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.012 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.012 | |
| gene silencing by rna | GO:0031047 | 3 | 0.012 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.012 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.012 | |
| regulation of molecular function | GO:0065009 | 320 | 0.012 | |
| posttranslational protein targeting to membrane translocation | GO:0031204 | 9 | 0.012 | |
| negative regulation of protein processing | GO:0010955 | 33 | 0.012 | |
| regulation of protein processing | GO:0070613 | 34 | 0.012 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.012 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.012 | |
| cell cycle g1 s phase transition | GO:0044843 | 64 | 0.012 | |
| protein acylation | GO:0043543 | 66 | 0.012 | |
| snorna metabolic process | GO:0016074 | 40 | 0.012 | |
| mitotic nuclear division | GO:0007067 | 131 | 0.012 | |
| vacuolar transport | GO:0007034 | 145 | 0.012 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 262 | 0.012 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 3 | 0.012 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.012 | |
| regulation of rna splicing | GO:0043484 | 3 | 0.012 | |
| protein catabolic process | GO:0030163 | 221 | 0.012 | |
| establishment or maintenance of cell polarity | GO:0007163 | 96 | 0.012 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.011 | |
| rrna metabolic process | GO:0016072 | 244 | 0.011 | |
| internal peptidyl lysine acetylation | GO:0018393 | 52 | 0.011 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 224 | 0.011 | |
| membrane fusion | GO:0061025 | 73 | 0.011 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 262 | 0.011 | |
| protein ubiquitination | GO:0016567 | 118 | 0.011 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.011 | |
| atp catabolic process | GO:0006200 | 224 | 0.011 | |
| g2 m transition of mitotic cell cycle | GO:0000086 | 38 | 0.011 | |
| response to organic substance | GO:0010033 | 182 | 0.011 | |
| negative regulation of cellular protein catabolic process | GO:1903363 | 27 | 0.011 | |
| histone modification | GO:0016570 | 119 | 0.011 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.011 | |
| internal protein amino acid acetylation | GO:0006475 | 52 | 0.010 | |
| protein polyubiquitination | GO:0000209 | 20 | 0.010 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.010 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.010 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.010 | |
