Saccharomyces cerevisiae

72 known processes

RAT1 (YOR048C)

Rat1p

(Aliases: TAP1,HKE1,XRN2)

RAT1 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
nuclear rna surveillanceGO:0071027300.889
aromatic compound catabolic processGO:00194394910.735
ncrna processingGO:00344703300.734
cellular nitrogen compound catabolic processGO:00442704940.654
mrna metabolic processGO:00160712690.468
heterocycle catabolic processGO:00467004940.430
rna surveillanceGO:0071025300.425
nuclear polyadenylation dependent rrna catabolic processGO:0071035180.392
macromolecule catabolic processGO:00090573830.354
rna catabolic processGO:00064011180.349
trna processingGO:00080331010.319
cell communicationGO:00071543450.273
trna metabolic processGO:00063991510.256
ribonucleoprotein complex assemblyGO:00226181430.239
snrna metabolic processGO:0016073250.218
nucleobase containing compound catabolic processGO:00346554790.213
ribosome biogenesisGO:00422543350.212
nuclear mrna surveillanceGO:0071028220.195
rrna processingGO:00063642270.192
nucleotide catabolic processGO:00091663300.168
trna modificationGO:0006400750.147
single organism cellular localizationGO:19025803750.145
rrna catabolic processGO:0016075310.139
actin filament based processGO:00300291040.138
mrna catabolic processGO:0006402930.134
regulation of molecular functionGO:00650093200.131
snorna processingGO:0043144340.130
nuclear transcribed mrna catabolic processGO:0000956890.130
double strand break repairGO:00063021050.129
purine nucleotide metabolic processGO:00061633760.128
single organism signalingGO:00447002080.127
regulation of nuclear divisionGO:00517831030.126
actin cytoskeleton organizationGO:00300361000.124
regulation of cellular component organizationGO:00511283340.120
snrna 3 end processingGO:0034472160.120
nucleoside triphosphate catabolic processGO:00091433290.112
organonitrogen compound catabolic processGO:19015654040.111
meiotic cell cycleGO:00513212720.107
organelle fissionGO:00482852720.106
positive regulation of nucleobase containing compound metabolic processGO:00459354090.102
ribonucleotide metabolic processGO:00092593770.101
negative regulation of cellular metabolic processGO:00313244070.100
snorna metabolic processGO:0016074400.100
negative regulation of cellular component organizationGO:00511291090.099
ribonucleoprotein complex subunit organizationGO:00718261520.098
protein localization to organelleGO:00333653370.098
nitrogen compound transportGO:00717052120.098
organic cyclic compound catabolic processGO:19013614990.096
purine nucleoside triphosphate metabolic processGO:00091443560.094
establishment of protein localization to organelleGO:00725942780.092
negative regulation of cellular biosynthetic processGO:00313273120.089
regulation of organelle organizationGO:00330432430.087
negative regulation of macromolecule metabolic processGO:00106053750.086
ribonucleotide catabolic processGO:00092613270.086
regulation of protein modification processGO:00313991100.086
cut catabolic processGO:0071034120.085
purine ribonucleotide metabolic processGO:00091503720.084
cell divisionGO:00513012050.082
nuclear divisionGO:00002802630.082
nucleoside metabolic processGO:00091163940.082
protein localization to nucleusGO:0034504740.081
carbohydrate derivative catabolic processGO:19011363390.080
signalingGO:00230522080.078
nucleic acid phosphodiester bond hydrolysisGO:00903051940.078
regulation of cell cycle processGO:00105641500.077
purine ribonucleoside triphosphate catabolic processGO:00092073270.076
regulation of transferase activityGO:0051338830.076
purine nucleoside metabolic processGO:00422783800.075
nucleoside phosphate catabolic processGO:19012923310.072
purine ribonucleoside metabolic processGO:00461283800.069
single organism catabolic processGO:00447126190.069
regulation of phosphorus metabolic processGO:00511742300.068
regulation of cell divisionGO:00513021130.066
nucleoside triphosphate metabolic processGO:00091413640.066
negative regulation of cell cycle processGO:0010948860.065
purine nucleotide catabolic processGO:00061953280.065
glycosyl compound metabolic processGO:19016573980.064
ribosome assemblyGO:0042255570.063
nucleobase containing small molecule metabolic processGO:00550864910.063
polyadenylation dependent rna catabolic processGO:0043633220.063
maturation of lsu rrnaGO:0000470390.063
negative regulation of transcription dna templatedGO:00458922580.062
regulation of mitotic cell cycleGO:00073461070.061
ribosomal large subunit biogenesisGO:0042273980.059
response to abiotic stimulusGO:00096281590.058
polyadenylation dependent ncrna catabolic processGO:0043634200.056
maturation of 5 8s rrnaGO:0000460800.056
maturation of lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000463330.055
snrna processingGO:0016180170.054
cellular protein complex disassemblyGO:0043624420.053
negative regulation of biosynthetic processGO:00098903120.053
cellular macromolecule catabolic processGO:00442653630.053
purine nucleoside triphosphate catabolic processGO:00091463290.052
ncrna catabolic processGO:0034661330.051
cellular response to chemical stimulusGO:00708873150.051
cell cycle g1 s phase transitionGO:0044843640.051
response to external stimulusGO:00096051580.050
regulation of meiotic cell cycleGO:0051445430.050
nuclear transportGO:00511691650.050
purine containing compound metabolic processGO:00725214000.050
purine ribonucleotide catabolic processGO:00091543270.049
phosphorylationGO:00163102910.049
purine containing compound catabolic processGO:00725233320.048
regulation of signalingGO:00230511190.048
protein targetingGO:00066052720.047
regulation of catalytic activityGO:00507903070.047
regulation of phosphate metabolic processGO:00192202300.046
protein dna complex assemblyGO:00650041050.046
rrna metabolic processGO:00160722440.044
regulation of meiosisGO:0040020420.044
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466800.043
ncrna 3 end processingGO:0043628440.042
organelle localizationGO:00516401280.042
positive regulation of biosynthetic processGO:00098913360.041
protein modification by small protein conjugation or removalGO:00706471720.041
organophosphate catabolic processGO:00464343380.041
negative regulation of rna metabolic processGO:00512532620.041
regulation of cell communicationGO:00106461240.040
positive regulation of macromolecule metabolic processGO:00106043940.040
negative regulation of nucleic acid templated transcriptionGO:19035072600.040
regulation of localizationGO:00328791270.040
regulation of signal transductionGO:00099661140.039
dna dependent dna replicationGO:00062611150.039
carbohydrate metabolic processGO:00059752520.037
ion homeostasisGO:00508011180.037
mitotic nuclear divisionGO:00070671310.037
negative regulation of macromolecule biosynthetic processGO:00105582910.037
negative regulation of cell cycleGO:0045786910.037
organophosphate metabolic processGO:00196375970.036
intracellular protein transportGO:00068863190.036
organic acid metabolic processGO:00060823520.035
ribonucleoside monophosphate metabolic processGO:00091612650.035
purine ribonucleoside catabolic processGO:00461303300.035
rna 3 end processingGO:0031123880.034
regulation of biological qualityGO:00650083910.034
cell wall organizationGO:00715551460.034
positive regulation of nitrogen compound metabolic processGO:00511734120.033
protein dna complex subunit organizationGO:00718241530.033
regulation of intracellular signal transductionGO:1902531780.032
ribonucleoside triphosphate catabolic processGO:00092033270.032
negative regulation of organelle organizationGO:00106391030.032
mrna processingGO:00063971850.032
regulation of cellular catabolic processGO:00313291950.031
modification dependent macromolecule catabolic processGO:00436322030.031
purine ribonucleoside triphosphate metabolic processGO:00092053540.031
carbohydrate derivative metabolic processGO:19011355490.030
organic acid biosynthetic processGO:00160531520.030
cation homeostasisGO:00550801050.030
regulation of purine nucleotide catabolic processGO:00331211060.030
nucleoside monophosphate metabolic processGO:00091232670.030
vesicle mediated transportGO:00161923350.030
negative regulation of gene expressionGO:00106293120.030
sexual reproductionGO:00199532160.030
g1 s transition of mitotic cell cycleGO:0000082640.029
mitotic cell cycle processGO:19030472940.029
homeostatic processGO:00425922270.029
regulation of catabolic processGO:00098941990.029
meiotic cell cycle processGO:19030462290.029
regulation of cellular localizationGO:0060341500.029
regulation of cell cycleGO:00517261950.029
positive regulation of macromolecule biosynthetic processGO:00105573250.029
purine nucleoside catabolic processGO:00061523300.028
glycosyl compound catabolic processGO:19016583350.028
protein complex disassemblyGO:0043241700.027
reciprocal dna recombinationGO:0035825540.027
regulation of nucleotide catabolic processGO:00308111060.027
response to starvationGO:0042594960.026
mitotic cell cycleGO:00002783060.026
purine nucleoside monophosphate catabolic processGO:00091282240.026
cellular response to heatGO:0034605530.026
negative regulation of catalytic activityGO:0043086600.025
signal transductionGO:00071652080.025
gene silencingGO:00164581510.025
regulation of cellular protein metabolic processGO:00322682320.025
negative regulation of molecular functionGO:0044092680.024
chemical homeostasisGO:00488781370.024
ribonucleoside triphosphate metabolic processGO:00091993560.024
ribose phosphate metabolic processGO:00196933840.024
negative regulation of meiotic cell cycleGO:0051447240.024
establishment of protein localizationGO:00451843670.024
poly a mrna export from nucleusGO:0016973240.024
cell cycle dna replicationGO:0044786360.024
u4 snrna 3 end processingGO:0034475110.024
response to nutrient levelsGO:00316671500.024
single organism membrane organizationGO:00448022750.024
regulation of protein metabolic processGO:00512462370.023
dna strand elongationGO:0022616290.023
positive regulation of rna metabolic processGO:00512542940.023
protein transportGO:00150313450.023
negative regulation of nucleobase containing compound metabolic processGO:00459342950.023
nucleoside monophosphate catabolic processGO:00091252240.023
response to extracellular stimulusGO:00099911560.023
single organism developmental processGO:00447672580.022
regulation of hydrolase activityGO:00513361330.022
reproductive processGO:00224142480.022
dna replication initiationGO:0006270480.022
guanosine containing compound catabolic processGO:19010691090.022
ribonucleoside catabolic processGO:00424543320.022
regulation of protein localizationGO:0032880620.022
regulation of nucleoside metabolic processGO:00091181060.022
nuclear polyadenylation dependent ncrna catabolic processGO:0071046200.021
cellular response to nutrient levelsGO:00316691440.021
response to organic cyclic compoundGO:001407010.021
trna catabolic processGO:0016078160.021
multi organism processGO:00517042330.021
cellular developmental processGO:00488691910.021
nucleoside phosphate metabolic processGO:00067534580.021
intracellular signal transductionGO:00355561120.021
membrane organizationGO:00610242760.021
purine ribonucleoside monophosphate metabolic processGO:00091672620.021
fungal type cell wall organizationGO:00315051450.020
cellular component disassemblyGO:0022411860.020
dna conformation changeGO:0071103980.020
cellular amino acid metabolic processGO:00065202250.020
multi organism reproductive processGO:00447032160.020
double strand break repair via homologous recombinationGO:0000724540.020
regulation of transportGO:0051049850.019
negative regulation of nitrogen compound metabolic processGO:00511723000.019
nucleoside catabolic processGO:00091643350.019
ribonucleoside monophosphate catabolic processGO:00091582240.019
single organism reproductive processGO:00447021590.019
regulation of gene expression epigeneticGO:00400291470.019
fungal type cell wall organization or biogenesisGO:00718521690.018
regulation of gtp catabolic processGO:0033124840.018
nucleotide metabolic processGO:00091174530.018
meiotic dna double strand break formationGO:0042138120.018
response to chemicalGO:00422213900.018
regulation of response to stimulusGO:00485831570.018
regulation of protein phosphorylationGO:0001932750.018
dephosphorylationGO:00163111270.018
dna replicationGO:00062601470.018
positive regulation of catabolic processGO:00098961350.017
purine ribonucleoside monophosphate catabolic processGO:00091692240.017
positive regulation of cellular catabolic processGO:00313311280.017
cellular response to starvationGO:0009267900.017
protein modification by small protein removalGO:0070646290.017
cellular response to dna damage stimulusGO:00069742870.017
nuclear importGO:0051170570.017
regulation of dna dependent dna replication initiationGO:0030174210.017
cleavage involved in rrna processingGO:0000469690.017
macromolecular complex disassemblyGO:0032984800.017
atp metabolic processGO:00460342510.017
negative regulation of rna biosynthetic processGO:19026792600.016
nucleocytoplasmic transportGO:00069131630.016
cellular response to extracellular stimulusGO:00316681500.016
oxoacid metabolic processGO:00434363510.016
mrna splicing via spliceosomeGO:00003981080.016
regulation of purine nucleotide metabolic processGO:19005421090.016
regulation of cell cycle phase transitionGO:1901987700.016
ribonucleoside metabolic processGO:00091193890.016
cut metabolic processGO:0071043120.016
mitotic cell cycle checkpointGO:0007093560.016
carboxylic acid metabolic processGO:00197523380.016
cellular chemical homeostasisGO:00550821230.015
cellular modified amino acid metabolic processGO:0006575510.015
regulation of chromatin organizationGO:1902275230.015
deathGO:0016265300.015
pre replicative complex assemblyGO:0036388200.015
negative regulation of response to stimulusGO:0048585400.014
positive regulation of transportGO:0051050320.014
rna splicing via transesterification reactionsGO:00003751180.014
regulation of protein kinase activityGO:0045859670.014
polyadenylation dependent snorna 3 end processingGO:007105180.014
positive regulation of molecular functionGO:00440931850.014
positive regulation of transcription from rna polymerase ii promoterGO:00459442520.014
regulation of gtpase activityGO:0043087840.014
nuclear polyadenylation dependent trna catabolic processGO:0071038160.014
chromatin remodelingGO:0006338800.014
endocytosisGO:0006897900.014
cellular component morphogenesisGO:0032989970.014
developmental processGO:00325022610.014
translesion synthesisGO:0019985160.013
protein localization to membraneGO:00726571020.013
cell cycle phase transitionGO:00447701440.013
alpha amino acid biosynthetic processGO:1901607910.013
response to osmotic stressGO:0006970830.013
autophagyGO:00069141060.012
meiosis iGO:0007127920.012
positive regulation of cellular protein metabolic processGO:0032270890.012
cellular response to oxidative stressGO:0034599940.012
positive regulation of gene expressionGO:00106283210.012
detection of stimulusGO:005160640.012
apoptotic processGO:0006915300.012
rna splicing via transesterification reactions with bulged adenosine as nucleophileGO:00003771090.012
oxidation reduction processGO:00551143530.012
programmed cell deathGO:0012501300.012
organelle assemblyGO:00709251180.012
positive regulation of cell communicationGO:0010647280.012
gtp metabolic processGO:00460391070.012
chromosome segregationGO:00070591590.012
rna polyadenylationGO:0043631260.012
negative regulation of cellular protein metabolic processGO:0032269850.012
negative regulation of signalingGO:0023057300.012
reciprocal meiotic recombinationGO:0007131540.012
negative regulation of mitotic cell cycleGO:0045930630.012
cellular response to organic substanceGO:00713101590.012
negative regulation of cellular macromolecule biosynthetic processGO:20001132890.011
negative regulation of mitotic cell cycle phase transitionGO:1901991570.011
positive regulation of purine nucleotide metabolic processGO:19005441000.011
rna modificationGO:0009451990.011
leading strand elongationGO:000627290.011
dna recombinationGO:00063101720.011
ras protein signal transductionGO:0007265290.011
protein import into nucleusGO:0006606550.011
nuclear retention of pre mrna at the site of transcriptionGO:007103390.011
positive regulation of cellular biosynthetic processGO:00313283360.010
protein complex assemblyGO:00064613020.010
snorna 3 end processingGO:0031126210.010
meiotic nuclear divisionGO:00071261630.010
nuclear mrna surveillance of mrna 3 end processingGO:007103170.010
nuclear ncrna surveillanceGO:0071029200.010
regulation of transcription from rna polymerase ii promoterGO:00063573940.010
negative regulation of cell cycle phase transitionGO:1901988590.010
regulation of hormone levelsGO:001081710.010

RAT1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org