| protein phosphorylation | GO:0006468 | 197 | 0.942 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.866 | |
| phosphorylation | GO:0016310 | 291 | 0.711 | |
| protein complex assembly | GO:0006461 | 302 | 0.632 | |
| regulation of cellular component biogenesis | GO:0044087 | 112 | 0.437 | |
| regulation of protein complex assembly | GO:0043254 | 77 | 0.407 | |
| fungal type cell wall biogenesis | GO:0009272 | 80 | 0.361 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.314 | Rat |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.309 | |
| developmental process | GO:0032502 | 261 | 0.302 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.285 | |
| cell wall biogenesis | GO:0042546 | 93 | 0.258 | |
| carbohydrate biosynthetic process | GO:0016051 | 82 | 0.257 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.241 | |
| signal transduction | GO:0007165 | 208 | 0.238 | |
| organelle fission | GO:0048285 | 272 | 0.234 | |
| regulation of cellular carbohydrate metabolic process | GO:0010675 | 41 | 0.232 | |
| monosaccharide metabolic process | GO:0005996 | 83 | 0.229 | |
| lipid metabolic process | GO:0006629 | 269 | 0.221 | |
| microtubule cytoskeleton organization | GO:0000226 | 109 | 0.216 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.210 | |
| cell communication | GO:0007154 | 345 | 0.207 | |
| regulation of protein kinase activity | GO:0045859 | 67 | 0.203 | Rat |
| microtubule organizing center organization | GO:0031023 | 33 | 0.197 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.193 | |
| single organism signaling | GO:0044700 | 208 | 0.183 | |
| membrane lipid biosynthetic process | GO:0046467 | 54 | 0.170 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.167 | |
| translation | GO:0006412 | 230 | 0.158 | |
| fungal type cell wall organization | GO:0031505 | 145 | 0.148 | |
| external encapsulating structure organization | GO:0045229 | 146 | 0.146 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.138 | |
| regulation of molecular function | GO:0065009 | 320 | 0.135 | Rat |
| microtubule based process | GO:0007017 | 117 | 0.133 | |
| iron sulfur cluster assembly | GO:0016226 | 22 | 0.130 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.126 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.126 | |
| fungal type cell wall assembly | GO:0071940 | 53 | 0.116 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.116 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.115 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 64 | 0.114 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.113 | |
| cell differentiation | GO:0030154 | 161 | 0.111 | |
| intracellular signal transduction | GO:0035556 | 112 | 0.110 | |
| trna wobble uridine modification | GO:0002098 | 26 | 0.108 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.107 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.105 | |
| positive regulation of fatty acid beta oxidation by positive regulation of transcription from rna polymerase ii promoter | GO:0097235 | 1 | 0.102 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.101 | |
| filamentous growth | GO:0030447 | 124 | 0.097 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.097 | |
| membrane lipid metabolic process | GO:0006643 | 67 | 0.097 | |
| regulation of carbohydrate metabolic process | GO:0006109 | 43 | 0.096 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.093 | Rat |
| regulation of carbohydrate biosynthetic process | GO:0043255 | 31 | 0.091 | |
| aging | GO:0007568 | 71 | 0.086 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.086 | |
| ascospore wall biogenesis | GO:0070591 | 52 | 0.086 | |
| cellular carbohydrate biosynthetic process | GO:0034637 | 49 | 0.086 | |
| reproductive process | GO:0022414 | 248 | 0.085 | |
| single organism catabolic process | GO:0044712 | 619 | 0.085 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 147 | 0.084 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 41 | 0.084 | |
| multi organism process | GO:0051704 | 233 | 0.083 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.082 | |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.081 | |
| ascospore formation | GO:0030437 | 107 | 0.081 | |
| single organism developmental process | GO:0044767 | 258 | 0.081 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.081 | |
| sphingolipid biosynthetic process | GO:0030148 | 29 | 0.080 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.080 | |
| hexose metabolic process | GO:0019318 | 78 | 0.079 | |
| trna metabolic process | GO:0006399 | 151 | 0.079 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.078 | |
| mrna metabolic process | GO:0016071 | 269 | 0.078 | |
| single organism reproductive process | GO:0044702 | 159 | 0.077 | |
| protein polymerization | GO:0051258 | 51 | 0.077 | |
| conjugation | GO:0000746 | 107 | 0.076 | |
| regulation of glucose metabolic process | GO:0010906 | 27 | 0.074 | |
| cell aging | GO:0007569 | 70 | 0.073 | |
| trna wobble base modification | GO:0002097 | 27 | 0.073 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.073 | |
| regulation of protein modification process | GO:0031399 | 110 | 0.072 | Rat |
| fungal type cell wall organization or biogenesis | GO:0071852 | 169 | 0.072 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.071 | |
| microtubule polymerization | GO:0046785 | 30 | 0.071 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.070 | |
| positive regulation of filamentous growth of a population of unicellular organisms in response to starvation | GO:1900436 | 4 | 0.070 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.069 | |
| conjugation with cellular fusion | GO:0000747 | 106 | 0.069 | |
| glucose metabolic process | GO:0006006 | 65 | 0.069 | |
| sporulation resulting in formation of a cellular spore | GO:0030435 | 129 | 0.068 | |
| reproductive process in single celled organism | GO:0022413 | 145 | 0.067 | |
| protein dephosphorylation | GO:0006470 | 40 | 0.066 | |
| dna repair | GO:0006281 | 236 | 0.065 | |
| signaling | GO:0023052 | 208 | 0.065 | |
| growth | GO:0040007 | 157 | 0.063 | |
| primary alcohol catabolic process | GO:0034310 | 1 | 0.063 | |
| positive regulation of catalytic activity | GO:0043085 | 178 | 0.063 | Rat |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.063 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.062 | |
| response to nutrient levels | GO:0031667 | 150 | 0.062 | |
| polysaccharide metabolic process | GO:0005976 | 60 | 0.059 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.059 | |
| regulation of transferase activity | GO:0051338 | 83 | 0.059 | Rat |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.059 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.059 | |
| cellular ketone metabolic process | GO:0042180 | 63 | 0.059 | |
| microtubule polymerization or depolymerization | GO:0031109 | 36 | 0.059 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.058 | |
| cell wall organization | GO:0071555 | 146 | 0.058 | |
| maintenance of protein location | GO:0045185 | 53 | 0.057 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.057 | |
| maintenance of protein location in cell | GO:0032507 | 50 | 0.057 | |
| positive regulation of carbohydrate metabolic process | GO:0045913 | 13 | 0.057 | |
| chromatin organization | GO:0006325 | 242 | 0.056 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.056 | |
| regulation of fatty acid oxidation | GO:0046320 | 3 | 0.055 | |
| organic acid catabolic process | GO:0016054 | 71 | 0.055 | |
| small gtpase mediated signal transduction | GO:0007264 | 36 | 0.054 | |
| carbohydrate transport | GO:0008643 | 33 | 0.054 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.054 | |
| peroxisome organization | GO:0007031 | 68 | 0.054 | |
| fatty acid metabolic process | GO:0006631 | 51 | 0.053 | |
| maintenance of location in cell | GO:0051651 | 58 | 0.053 | |
| regulation of anatomical structure size | GO:0090066 | 50 | 0.053 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.053 | |
| chromatin silencing | GO:0006342 | 147 | 0.053 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.052 | Rat |
| single organism carbohydrate catabolic process | GO:0044724 | 73 | 0.052 | |
| carbohydrate catabolic process | GO:0016052 | 77 | 0.052 | |
| response to oxidative stress | GO:0006979 | 99 | 0.052 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.051 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.051 | Rat |
| regulation of cellular component size | GO:0032535 | 50 | 0.051 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.051 | |
| negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from rna polymerase ii promoter | GO:1900460 | 3 | 0.051 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.051 | |
| er to golgi vesicle mediated transport | GO:0006888 | 86 | 0.051 | |
| carboxylic acid catabolic process | GO:0046395 | 71 | 0.051 | |
| trna processing | GO:0008033 | 101 | 0.050 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.050 | |
| regulation of ethanol catabolic process | GO:1900065 | 1 | 0.050 | |
| homeostatic process | GO:0042592 | 227 | 0.050 | |
| glucose transport | GO:0015758 | 23 | 0.050 | |
| dna damage checkpoint | GO:0000077 | 29 | 0.050 | |
| pyruvate metabolic process | GO:0006090 | 37 | 0.049 | |
| budding cell bud growth | GO:0007117 | 29 | 0.049 | |
| glycolytic process | GO:0006096 | 21 | 0.049 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.049 | Rat |
| cellular response to nutrient | GO:0031670 | 50 | 0.049 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 260 | 0.048 | |
| positive regulation of transcription from rna polymerase ii promoter in response to alkaline ph | GO:0061422 | 3 | 0.048 | |
| maintenance of location | GO:0051235 | 66 | 0.048 | |
| response to reactive oxygen species | GO:0000302 | 22 | 0.048 | |
| spindle pole body organization | GO:0051300 | 33 | 0.048 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 147 | 0.047 | Rat |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.047 | |
| gtp metabolic process | GO:0046039 | 107 | 0.046 | |
| mating type determination | GO:0007531 | 32 | 0.046 | |
| cellular developmental process | GO:0048869 | 191 | 0.046 | |
| nucleus organization | GO:0006997 | 62 | 0.046 | |
| positive regulation of transcription from rna polymerase ii promoter in response to salt stress | GO:0036251 | 4 | 0.046 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.046 | |
| regulation of meiotic cell cycle | GO:0051445 | 43 | 0.046 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.046 | |
| cytoskeleton organization | GO:0007010 | 230 | 0.046 | |
| regulation of filamentous growth | GO:0010570 | 38 | 0.046 | |
| regulation of protein phosphorylation | GO:0001932 | 75 | 0.046 | Rat |
| meiotic chromosome segregation | GO:0045132 | 31 | 0.045 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 27 | 0.045 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.045 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.045 | |
| protein catabolic process | GO:0030163 | 221 | 0.045 | |
| sexual sporulation resulting in formation of a cellular spore | GO:0043935 | 113 | 0.045 | |
| positive regulation of lipid catabolic process | GO:0050996 | 4 | 0.044 | |
| cellular response to oxidative stress | GO:0034599 | 94 | 0.044 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.044 | |
| positive regulation of protein metabolic process | GO:0051247 | 93 | 0.044 | Rat |
| positive regulation of transcription from rna polymerase ii promoter in response to a hypotonic environment | GO:0061401 | 2 | 0.043 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.043 | |
| cellular response to pheromone | GO:0071444 | 88 | 0.043 | |
| cell cycle g1 s phase transition | GO:0044843 | 64 | 0.043 | |
| regulation of fatty acid beta oxidation | GO:0031998 | 3 | 0.043 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.042 | Rat |
| negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from rna polymerase ii promoter | GO:1900464 | 2 | 0.042 | |
| monosaccharide transport | GO:0015749 | 24 | 0.042 | |
| response to external stimulus | GO:0009605 | 158 | 0.041 | |
| cell growth | GO:0016049 | 89 | 0.041 | |
| filamentous growth of a population of unicellular organisms | GO:0044182 | 109 | 0.041 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.041 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.041 | Rat |
| sister chromatid cohesion | GO:0007062 | 49 | 0.041 | |
| regulation of metal ion transport | GO:0010959 | 2 | 0.041 | |
| metallo sulfur cluster assembly | GO:0031163 | 22 | 0.041 | |
| multi organism cellular process | GO:0044764 | 120 | 0.041 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 16 | 0.040 | |
| nucleotide excision repair | GO:0006289 | 50 | 0.040 | |
| trna modification | GO:0006400 | 75 | 0.040 | |
| rna modification | GO:0009451 | 99 | 0.040 | |
| chromatin remodeling | GO:0006338 | 80 | 0.040 | |
| dephosphorylation | GO:0016311 | 127 | 0.040 | |
| cell budding | GO:0007114 | 48 | 0.040 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 42 | 0.040 | |
| negative regulation of ergosterol biosynthetic process | GO:0010895 | 1 | 0.040 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.039 | |
| chemical homeostasis | GO:0048878 | 137 | 0.039 | |
| positive regulation of transcription from rna polymerase ii promoter in response to calcium ion | GO:0061400 | 1 | 0.039 | |
| nuclear division | GO:0000280 | 263 | 0.038 | |
| positive regulation of cellular catabolic process | GO:0031331 | 128 | 0.038 | |
| positive regulation of transcription from rna polymerase ii promoter in response to increased salt | GO:0061404 | 4 | 0.038 | |
| regulation of generation of precursor metabolites and energy | GO:0043467 | 23 | 0.038 | |
| replicative cell aging | GO:0001302 | 46 | 0.038 | |
| cell wall organization or biogenesis | GO:0071554 | 190 | 0.038 | |
| regulation of kinase activity | GO:0043549 | 71 | 0.037 | Rat |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.037 | |
| small molecule catabolic process | GO:0044282 | 88 | 0.037 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 55 | 0.037 | |
| positive regulation of transcription from rna polymerase ii promoter in response to cold | GO:0061411 | 2 | 0.037 | |
| positive regulation of transcription from rna polymerase ii promoter by calcium mediated signaling | GO:1900622 | 1 | 0.037 | |
| invasive filamentous growth | GO:0036267 | 65 | 0.037 | |
| response to nitrosative stress | GO:0051409 | 3 | 0.037 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.037 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.037 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 32 | 0.037 | |
| hexose biosynthetic process | GO:0019319 | 30 | 0.036 | |
| gene silencing | GO:0016458 | 151 | 0.036 | |
| negative regulation of response to stimulus | GO:0048585 | 40 | 0.035 | |
| positive regulation of transcription from rna polymerase ii promoter in response to nitrosative stress | GO:0061403 | 2 | 0.035 | |
| amine metabolic process | GO:0009308 | 51 | 0.035 | |
| regulation of transcription from rna polymerase ii promoter in response to stress | GO:0043618 | 51 | 0.035 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.035 | |
| positive regulation of response to drug | GO:2001025 | 3 | 0.035 | |
| ascospore wall assembly | GO:0030476 | 52 | 0.035 | |
| regulation of sulfite transport | GO:1900071 | 1 | 0.034 | |
| negative regulation of steroid metabolic process | GO:0045939 | 1 | 0.034 | |
| response to carbohydrate | GO:0009743 | 14 | 0.034 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.034 | |
| response to pheromone | GO:0019236 | 92 | 0.034 | |
| regulation of cell wall organization or biogenesis | GO:1903338 | 18 | 0.034 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.034 | |
| response to starvation | GO:0042594 | 96 | 0.034 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.034 | |
| regulation of cell size | GO:0008361 | 30 | 0.034 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.034 | |
| positive regulation of transcription from rna polymerase ii promoter in response to ethanol | GO:0061410 | 3 | 0.033 | |
| cellular response to blue light | GO:0071483 | 2 | 0.033 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 89 | 0.033 | |
| growth of unicellular organism as a thread of attached cells | GO:0070783 | 105 | 0.033 | |
| asexual reproduction | GO:0019954 | 48 | 0.033 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.033 | |
| invasive growth in response to glucose limitation | GO:0001403 | 61 | 0.033 | |
| mitotic cell cycle phase transition | GO:0044772 | 141 | 0.033 | |
| chromatin silencing at silent mating type cassette | GO:0030466 | 53 | 0.032 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.032 | |
| regulation of cyclin dependent protein serine threonine kinase activity | GO:0000079 | 19 | 0.032 | |
| positive regulation of transcription from rna polymerase ii promoter in response to oxidative stress | GO:0036091 | 3 | 0.032 | |
| positive regulation of hydrolase activity | GO:0051345 | 112 | 0.032 | |
| cell cycle checkpoint | GO:0000075 | 82 | 0.032 | |
| spindle pole body separation | GO:0000073 | 13 | 0.032 | |
| chromatin modification | GO:0016568 | 200 | 0.032 | |
| regulation of cellular response to stress | GO:0080135 | 50 | 0.032 | |
| positive regulation of fatty acid oxidation | GO:0046321 | 3 | 0.032 | |
| mrna catabolic process | GO:0006402 | 93 | 0.032 | |
| exit from mitosis | GO:0010458 | 37 | 0.031 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 194 | 0.031 | |
| regulation of gluconeogenesis | GO:0006111 | 16 | 0.031 | |
| positive regulation of cellular response to drug | GO:2001040 | 3 | 0.031 | |
| regulation of biological quality | GO:0065008 | 391 | 0.031 | |
| protein targeting | GO:0006605 | 272 | 0.031 | |
| regulation of lipid catabolic process | GO:0050994 | 4 | 0.031 | |
| chromatin assembly or disassembly | GO:0006333 | 60 | 0.031 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.030 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 80 | 0.030 | |
| sporulation | GO:0043934 | 132 | 0.029 | |
| oxidation reduction process | GO:0055114 | 353 | 0.029 | |
| regulation of dna templated transcription in response to stress | GO:0043620 | 51 | 0.029 | |
| anatomical structure development | GO:0048856 | 160 | 0.029 | |
| ethanol catabolic process | GO:0006068 | 1 | 0.029 | |
| glycerophospholipid biosynthetic process | GO:0046474 | 68 | 0.029 | |
| positive regulation of transcription on exit from mitosis | GO:0007072 | 1 | 0.029 | |
| ion homeostasis | GO:0050801 | 118 | 0.029 | |
| ras protein signal transduction | GO:0007265 | 29 | 0.028 | |
| positive regulation of transcription from rna polymerase ii promoter in response to freezing | GO:0061409 | 2 | 0.028 | |
| ncrna processing | GO:0034470 | 330 | 0.028 | |
| surface biofilm formation | GO:0090604 | 3 | 0.028 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.028 | |
| phospholipid biosynthetic process | GO:0008654 | 89 | 0.028 | |
| regulation of endocytosis | GO:0030100 | 17 | 0.028 | |
| single species surface biofilm formation | GO:0090606 | 3 | 0.028 | |
| regulation of pseudohyphal growth | GO:2000220 | 18 | 0.028 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.028 | |
| sphingolipid metabolic process | GO:0006665 | 41 | 0.028 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.028 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 125 | 0.028 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.028 | |
| carbon catabolite regulation of transcription | GO:0045990 | 39 | 0.028 | |
| regulation of intracellular signal transduction | GO:1902531 | 78 | 0.027 | |
| negative regulation of catabolic process | GO:0009895 | 43 | 0.027 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.027 | |
| cell development | GO:0048468 | 107 | 0.027 | |
| regulation of potassium ion concentration by positive regulation of transcription from rna polymerase ii promoter | GO:0097301 | 1 | 0.027 | |
| response to glucose | GO:0009749 | 13 | 0.027 | |
| protein localization to organelle | GO:0033365 | 337 | 0.027 | |
| regulation of fungal type cell wall organization | GO:0060237 | 14 | 0.027 | |
| alcohol metabolic process | GO:0006066 | 112 | 0.027 | |
| regulation of cell communication | GO:0010646 | 124 | 0.027 | |
| response to chemical | GO:0042221 | 390 | 0.027 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.027 | |
| cell cycle phase transition | GO:0044770 | 144 | 0.027 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.027 | |
| gluconeogenesis | GO:0006094 | 30 | 0.027 | |
| nitrogen utilization | GO:0019740 | 21 | 0.027 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.027 | |
| positive regulation of sodium ion transport by positive regulation of transcription from rna polymerase ii promoter | GO:0061423 | 1 | 0.027 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.027 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.027 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.027 | |
| positive regulation of catabolic process | GO:0009896 | 135 | 0.026 | |
| karyogamy | GO:0000741 | 17 | 0.026 | |
| positive regulation of transcription from rna polymerase ii promoter in response to zinc ion starvation | GO:0097236 | 3 | 0.026 | |
| establishment of protein localization | GO:0045184 | 367 | 0.026 | |
| sexual sporulation | GO:0034293 | 113 | 0.026 | |
| positive regulation of transferase activity | GO:0051347 | 28 | 0.026 | Rat |
| cofactor biosynthetic process | GO:0051188 | 80 | 0.026 | |
| negative regulation of cellular response to alkaline ph by negative regulation of transcription from rna polymerase ii promoter | GO:1900463 | 1 | 0.026 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.026 | |
| regulation of response to drug | GO:2001023 | 3 | 0.026 | |
| positive regulation of translation | GO:0045727 | 34 | 0.026 | |
| negative regulation of protein kinase activity | GO:0006469 | 23 | 0.026 | |
| purine containing compound biosynthetic process | GO:0072522 | 53 | 0.026 | |
| positive regulation of protein kinase activity | GO:0045860 | 22 | 0.026 | Rat |
| regulation of nucleotide catabolic process | GO:0030811 | 106 | 0.026 | |
| positive regulation of filamentous growth of a population of unicellular organisms | GO:1900430 | 18 | 0.026 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.025 | |
| positive regulation of sulfite transport by positive regulation of transcription from rna polymerase ii promoter | GO:0061426 | 1 | 0.025 | |
| pseudohyphal growth | GO:0007124 | 75 | 0.025 | |
| positive regulation of phosphorylation | GO:0042327 | 33 | 0.025 | Rat |
| response to oxygen containing compound | GO:1901700 | 61 | 0.025 | |
| response to osmotic stress | GO:0006970 | 83 | 0.025 | |
| positive regulation of transcription from rna polymerase ii promoter in response to stress | GO:0036003 | 33 | 0.025 | |
| regulation of phosphorylation | GO:0042325 | 86 | 0.025 | Rat |
| polysaccharide biosynthetic process | GO:0000271 | 39 | 0.025 | |
| regulation of transcription from rna polymerase ii promoter in response to uv induced dna damage | GO:0010767 | 1 | 0.025 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.025 | |
| organelle localization | GO:0051640 | 128 | 0.025 | |
| regulation of sodium ion transport | GO:0002028 | 1 | 0.025 | |
| cellular carbohydrate metabolic process | GO:0044262 | 135 | 0.025 | |
| nucleic acid transport | GO:0050657 | 94 | 0.025 | |
| rna export from nucleus | GO:0006405 | 88 | 0.025 | |
| glucosamine containing compound metabolic process | GO:1901071 | 18 | 0.025 | |
| cellular glucan metabolic process | GO:0006073 | 44 | 0.025 | |
| regulation of gtpase activity | GO:0043087 | 84 | 0.025 | |
| negative regulation of cellular response to alkaline ph | GO:1900068 | 1 | 0.025 | |
| negative regulation of transferase activity | GO:0051348 | 31 | 0.025 | |
| carbon catabolite repression of transcription from rna polymerase ii promoter | GO:0000437 | 12 | 0.024 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 100 | 0.024 | |
| dna conformation change | GO:0071103 | 98 | 0.024 | |
| positive regulation of transcription from rna polymerase ii promoter in response to hydrogen peroxide | GO:0061407 | 2 | 0.024 | |
| ribosomal large subunit biogenesis | GO:0042273 | 98 | 0.024 | |
| spore wall assembly | GO:0042244 | 52 | 0.024 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.024 | |
| positive regulation of gtp catabolic process | GO:0033126 | 80 | 0.024 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.024 | |
| positive regulation of ras protein signal transduction | GO:0046579 | 3 | 0.024 | |
| cellular response to starvation | GO:0009267 | 90 | 0.024 | |
| positive regulation of protein phosphorylation | GO:0001934 | 28 | 0.024 | Rat |
| cellular amino acid catabolic process | GO:0009063 | 48 | 0.024 | |
| regulation of signaling | GO:0023051 | 119 | 0.024 | |
| cellular response to nutrient levels | GO:0031669 | 144 | 0.024 | |
| cell wall assembly | GO:0070726 | 54 | 0.024 | |
| cation homeostasis | GO:0055080 | 105 | 0.024 | |
| monovalent inorganic cation transport | GO:0015672 | 78 | 0.024 | |
| regulation of growth | GO:0040008 | 50 | 0.024 | |
| guanosine containing compound metabolic process | GO:1901068 | 111 | 0.023 | |
| regulation of vesicle mediated transport | GO:0060627 | 39 | 0.023 | |
| positive regulation of transcription from rna polymerase ii promoter by oleic acid | GO:0061429 | 4 | 0.023 | |
| cell wall polysaccharide metabolic process | GO:0010383 | 17 | 0.023 | |
| sex determination | GO:0007530 | 32 | 0.023 | |
| detection of stimulus | GO:0051606 | 4 | 0.023 | |
| cellular response to zinc ion starvation | GO:0034224 | 3 | 0.023 | |
| positive regulation of transcription from rna polymerase ii promoter in response to glucose starvation | GO:0061406 | 2 | 0.023 | |
| positive regulation of purine nucleotide catabolic process | GO:0033123 | 97 | 0.023 | |
| positive regulation of nucleotide metabolic process | GO:0045981 | 101 | 0.023 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.023 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 136 | 0.023 | |
| rna transport | GO:0050658 | 92 | 0.023 | |
| acetate biosynthetic process | GO:0019413 | 4 | 0.023 | |
| positive regulation of ethanol catabolic process by positive regulation of transcription from rna polymerase ii promoter | GO:0061425 | 1 | 0.023 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.023 | |
| cell wall polysaccharide biosynthetic process | GO:0070592 | 14 | 0.023 | |
| tor signaling | GO:0031929 | 17 | 0.022 | |
| regulation of localization | GO:0032879 | 127 | 0.022 | |
| regulation of dna repair | GO:0006282 | 14 | 0.022 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 51 | 0.022 | |
| phytosteroid metabolic process | GO:0016128 | 31 | 0.022 | |
| regulation of replicative cell aging by regulation of transcription from rna polymerase ii promoter in response to caloric restriction | GO:0061434 | 2 | 0.022 | |
| regulation of polysaccharide metabolic process | GO:0032881 | 15 | 0.022 | |
| response to inorganic substance | GO:0010035 | 47 | 0.022 | |
| response to salt stress | GO:0009651 | 34 | 0.022 | |
| carbon catabolite activation of transcription from rna polymerase ii promoter | GO:0000436 | 22 | 0.022 | |
| karyogamy involved in conjugation with cellular fusion | GO:0000742 | 15 | 0.022 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.022 | |
| chromosome organization involved in meiosis | GO:0070192 | 32 | 0.022 | |
| positive regulation of transcription by oleic acid | GO:0061421 | 4 | 0.022 | |
| positive regulation of transcription from rna polymerase ii promoter in response to acidic ph | GO:0061402 | 4 | 0.022 | |
| gtp catabolic process | GO:0006184 | 107 | 0.021 | |
| positive regulation of ethanol catabolic process | GO:1900066 | 1 | 0.021 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.021 | |
| protein ubiquitination | GO:0016567 | 118 | 0.021 | |
| carbon catabolite repression of transcription | GO:0045013 | 12 | 0.021 | |
| negative regulation of carbohydrate metabolic process | GO:0045912 | 17 | 0.021 | |
| regulation of translation | GO:0006417 | 89 | 0.021 | |
| positive regulation of sulfite transport | GO:1900072 | 1 | 0.021 | |
| cellular response to nitrosative stress | GO:0071500 | 2 | 0.021 | |
| fungal type cell wall polysaccharide biosynthetic process | GO:0051278 | 13 | 0.021 | |
| negative regulation of steroid biosynthetic process | GO:0010894 | 1 | 0.021 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.021 | |
| protein folding | GO:0006457 | 94 | 0.021 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.021 | |
| regulation of dna templated transcription elongation | GO:0032784 | 44 | 0.021 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.021 | |
| positive regulation of gtpase activity | GO:0043547 | 80 | 0.021 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.021 | |
| cation transport | GO:0006812 | 166 | 0.021 | |
| cellular response to hydrostatic pressure | GO:0071464 | 2 | 0.021 | |
| positive regulation of kinase activity | GO:0033674 | 24 | 0.020 | Rat |
| response to blue light | GO:0009637 | 2 | 0.020 | |
| positive regulation of fatty acid beta oxidation | GO:0032000 | 3 | 0.020 | |
| cellular polysaccharide metabolic process | GO:0044264 | 55 | 0.020 | |
| microtubule anchoring | GO:0034453 | 25 | 0.020 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.020 | |
| positive regulation of cellular carbohydrate metabolic process | GO:0010676 | 13 | 0.020 | |
| primary alcohol metabolic process | GO:0034308 | 12 | 0.020 | |
| regulation of meiosis | GO:0040020 | 42 | 0.020 | |
| dna packaging | GO:0006323 | 55 | 0.020 | |
| negative regulation of gene silencing | GO:0060969 | 27 | 0.020 | |
| steroid metabolic process | GO:0008202 | 47 | 0.020 | |
| generation of precursor metabolites and energy | GO:0006091 | 147 | 0.020 | |
| lipid modification | GO:0030258 | 37 | 0.020 | |
| response to hexose | GO:0009746 | 13 | 0.020 | |
| regulation of gtp catabolic process | GO:0033124 | 84 | 0.020 | |
| phosphorylation of rna polymerase ii c terminal domain | GO:0070816 | 20 | 0.020 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.019 | |
| cellular carbohydrate catabolic process | GO:0044275 | 33 | 0.019 | |
| mitotic cytokinetic process | GO:1902410 | 45 | 0.019 | |
| cell wall macromolecule biosynthetic process | GO:0044038 | 24 | 0.019 | |
| cellular response to calcium ion | GO:0071277 | 1 | 0.019 | |
| cellular alcohol metabolic process | GO:0044107 | 34 | 0.019 | |
| autophagy | GO:0006914 | 106 | 0.019 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.019 | |
| regulation of transmembrane transporter activity | GO:0022898 | 1 | 0.019 | |
| spore wall biogenesis | GO:0070590 | 52 | 0.019 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 47 | 0.019 | |
| positive regulation of cytokinetic cell separation | GO:2001043 | 1 | 0.019 | |
| hyperosmotic salinity response | GO:0042538 | 9 | 0.019 | |
| sexual reproduction | GO:0019953 | 216 | 0.019 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 137 | 0.019 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 89 | 0.019 | Rat |
| regulation of cellular response to drug | GO:2001038 | 3 | 0.019 | |
| intracellular protein transport | GO:0006886 | 319 | 0.019 | |
| carboxylic acid biosynthetic process | GO:0046394 | 152 | 0.018 | |
| regulation of ras protein signal transduction | GO:0046578 | 47 | 0.018 | |
| response to hydrogen peroxide | GO:0042542 | 12 | 0.018 | |
| sterol biosynthetic process | GO:0016126 | 35 | 0.018 | |
| cell wall macromolecule metabolic process | GO:0044036 | 27 | 0.018 | |
| regulation of cellular hyperosmotic salinity response | GO:1900069 | 2 | 0.018 | |
| cellular component morphogenesis | GO:0032989 | 97 | 0.018 | |
| fatty acid oxidation | GO:0019395 | 13 | 0.018 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 97 | 0.018 | |
| negative regulation of response to salt stress | GO:1901001 | 2 | 0.018 | |
| nucleobase containing compound transport | GO:0015931 | 124 | 0.018 | |
| golgi vesicle transport | GO:0048193 | 188 | 0.018 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.018 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.018 | |
| inorganic anion transport | GO:0015698 | 30 | 0.018 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 81 | 0.018 | |
| carbon catabolite activation of transcription | GO:0045991 | 26 | 0.018 | |
| alcohol biosynthetic process | GO:0046165 | 75 | 0.018 | |
| response to organic substance | GO:0010033 | 182 | 0.017 | |
| negative regulation of filamentous growth of a population of unicellular organisms | GO:1900429 | 12 | 0.017 | |
| nucleotide biosynthetic process | GO:0009165 | 79 | 0.017 | |
| monosaccharide biosynthetic process | GO:0046364 | 31 | 0.017 | |
| ribose phosphate biosynthetic process | GO:0046390 | 50 | 0.017 | |
| glycerolipid biosynthetic process | GO:0045017 | 71 | 0.017 | |
| response to nutrient | GO:0007584 | 52 | 0.017 | |
| negative regulation of meiotic cell cycle | GO:0051447 | 24 | 0.017 | |
| positive regulation of transcription from rna polymerase ii promoter in response to osmotic stress | GO:0061393 | 8 | 0.017 | |
| proteolysis | GO:0006508 | 268 | 0.017 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.017 | |
| cellular response to salt stress | GO:0071472 | 19 | 0.017 | |
| polyamine transport | GO:0015846 | 13 | 0.017 | |
| cellular response to acidic ph | GO:0071468 | 4 | 0.017 | |
| mating type switching | GO:0007533 | 28 | 0.017 | |
| mrna processing | GO:0006397 | 185 | 0.017 | |
| positive regulation of protein complex assembly | GO:0031334 | 39 | 0.017 | |
| negative regulation of protein phosphorylation | GO:0001933 | 24 | 0.017 | |
| regulation of transcription by chromatin organization | GO:0034401 | 19 | 0.017 | |
