| dna repair | GO:0006281 | 236 | 1.000 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.998 | |
| double strand break repair | GO:0006302 | 105 | 0.983 | |
| dna unwinding involved in dna replication | GO:0006268 | 13 | 0.981 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.980 | |
| meiosis i | GO:0007127 | 92 | 0.977 | |
| double strand break repair via homologous recombination | GO:0000724 | 54 | 0.967 | |
| telomere organization | GO:0032200 | 75 | 0.957 | |
| organelle fission | GO:0048285 | 272 | 0.953 | |
| telomere maintenance | GO:0000723 | 74 | 0.944 | |
| telomere maintenance via recombination | GO:0000722 | 32 | 0.901 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.880 | |
| dna replication | GO:0006260 | 147 | 0.875 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.859 | |
| telomere maintenance via telomerase | GO:0007004 | 21 | 0.854 | |
| dna dependent dna replication | GO:0006261 | 115 | 0.842 | |
| nucleotide excision repair | GO:0006289 | 50 | 0.825 | |
| dna strand elongation | GO:0022616 | 29 | 0.814 | |
| dna recombination | GO:0006310 | 172 | 0.799 | |
| reciprocal dna recombination | GO:0035825 | 54 | 0.793 | |
| recombinational repair | GO:0000725 | 64 | 0.787 | |
| dna strand elongation involved in dna replication | GO:0006271 | 26 | 0.744 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.721 | |
| dna topological change | GO:0006265 | 10 | 0.677 | |
| telomere maintenance via telomere lengthening | GO:0010833 | 22 | 0.674 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.673 | |
| heteroduplex formation | GO:0030491 | 9 | 0.633 | |
| rna dependent dna replication | GO:0006278 | 25 | 0.625 | |
| nuclear division | GO:0000280 | 263 | 0.622 | |
| aging | GO:0007568 | 71 | 0.591 | |
| lagging strand elongation | GO:0006273 | 10 | 0.585 | |
| anatomical structure homeostasis | GO:0060249 | 74 | 0.522 | |
| dna geometric change | GO:0032392 | 43 | 0.467 | |
| dna conformation change | GO:0071103 | 98 | 0.421 | |
| cell aging | GO:0007569 | 70 | 0.409 | |
| reciprocal meiotic recombination | GO:0007131 | 54 | 0.406 | |
| homeostatic process | GO:0042592 | 227 | 0.389 | |
| protein dna complex assembly | GO:0065004 | 105 | 0.380 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.335 | |
| protein complex assembly | GO:0006461 | 302 | 0.328 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.317 | |
| single organism developmental process | GO:0044767 | 258 | 0.237 | Zebrafish Mouse Worm |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.229 | |
| microtubule based process | GO:0007017 | 117 | 0.218 | |
| chromosome segregation | GO:0007059 | 159 | 0.217 | |
| cytoskeleton organization | GO:0007010 | 230 | 0.211 | |
| regulation of biological quality | GO:0065008 | 391 | 0.187 | |
| regulation of cell cycle phase transition | GO:1901987 | 70 | 0.185 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.177 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.173 | |
| dna duplex unwinding | GO:0032508 | 42 | 0.164 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.162 | |
| regulation of cell cycle g2 m phase transition | GO:1902749 | 8 | 0.158 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 68 | 0.154 | |
| protein ubiquitination | GO:0016567 | 118 | 0.139 | |
| developmental process | GO:0032502 | 261 | 0.135 | Zebrafish Mouse Worm |
| regulation of dna repair | GO:0006282 | 14 | 0.131 | |
| dna catabolic process | GO:0006308 | 42 | 0.129 | |
| replicative cell aging | GO:0001302 | 46 | 0.128 | |
| dna damage checkpoint | GO:0000077 | 29 | 0.128 | |
| mitotic sister chromatid segregation | GO:0000070 | 85 | 0.123 | |
| regulation of dna recombination | GO:0000018 | 24 | 0.120 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.120 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 59 | 0.111 | |
| sister chromatid segregation | GO:0000819 | 93 | 0.104 | |
| regulation of dna templated transcription initiation | GO:2000142 | 19 | 0.101 | |
| base excision repair | GO:0006284 | 14 | 0.098 | Human |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.098 | |
| regulation of nuclear division | GO:0051783 | 103 | 0.095 | |
| non recombinational repair | GO:0000726 | 33 | 0.091 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 262 | 0.090 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 57 | 0.089 | |
| regulation of cell division | GO:0051302 | 113 | 0.088 | |
| dna double strand break processing | GO:0000729 | 8 | 0.086 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.086 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.081 | |
| multi organism process | GO:0051704 | 233 | 0.079 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.079 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.078 | |
| mitotic nuclear division | GO:0007067 | 131 | 0.077 | |
| chromosome condensation | GO:0030261 | 19 | 0.075 | |
| regulation of response to dna damage stimulus | GO:2001020 | 17 | 0.074 | |
| positive regulation of signal transduction | GO:0009967 | 20 | 0.073 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 194 | 0.073 | |
| organophosphate ester transport | GO:0015748 | 45 | 0.072 | |
| regulation of chromosome organization | GO:0033044 | 66 | 0.067 | |
| regulation of signaling | GO:0023051 | 119 | 0.067 | |
| cell division | GO:0051301 | 205 | 0.067 | |
| rna catabolic process | GO:0006401 | 118 | 0.066 | |
| establishment of protein localization | GO:0045184 | 367 | 0.065 | |
| regulation of protein catabolic process | GO:0042176 | 40 | 0.061 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.060 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.058 | |
| protein polymerization | GO:0051258 | 51 | 0.058 | |
| single organism catabolic process | GO:0044712 | 619 | 0.057 | |
| negative regulation of cell cycle | GO:0045786 | 91 | 0.057 | |
| protein dna complex subunit organization | GO:0071824 | 153 | 0.057 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.055 | |
| mating type switching | GO:0007533 | 28 | 0.054 | |
| negative regulation of cell cycle process | GO:0010948 | 86 | 0.054 | |
| meiotic mismatch repair | GO:0000710 | 9 | 0.052 | |
| nucleobase containing compound transport | GO:0015931 | 124 | 0.052 | |
| macromolecule methylation | GO:0043414 | 85 | 0.049 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.049 | |
| transition metal ion homeostasis | GO:0055076 | 59 | 0.049 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.049 | |
| regulation of protein complex assembly | GO:0043254 | 77 | 0.049 | |
| positive regulation of protein complex assembly | GO:0031334 | 39 | 0.048 | |
| microtubule cytoskeleton organization | GO:0000226 | 109 | 0.048 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.044 | |
| negative regulation of organelle organization | GO:0010639 | 103 | 0.044 | |
| reproductive process | GO:0022414 | 248 | 0.043 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 137 | 0.043 | |
| meiotic dna double strand break processing | GO:0000706 | 5 | 0.042 | |
| endomembrane system organization | GO:0010256 | 74 | 0.041 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.041 | |
| chromosome separation | GO:0051304 | 33 | 0.041 | |
| mitotic dna integrity checkpoint | GO:0044774 | 18 | 0.040 | |
| negative regulation of proteasomal protein catabolic process | GO:1901799 | 25 | 0.039 | |
| negative regulation of protein catabolic process | GO:0042177 | 27 | 0.038 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.038 | |
| dna catabolic process exonucleolytic | GO:0000738 | 19 | 0.037 | |
| nucleocytoplasmic transport | GO:0006913 | 163 | 0.037 | |
| chromatin organization | GO:0006325 | 242 | 0.036 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.036 | |
| meiotic chromosome segregation | GO:0045132 | 31 | 0.035 | |
| dna integrity checkpoint | GO:0031570 | 41 | 0.034 | |
| negative regulation of protein processing | GO:0010955 | 33 | 0.034 | |
| protein transport | GO:0015031 | 345 | 0.034 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.034 | |
| endosomal transport | GO:0016197 | 86 | 0.034 | |
| regulation of dna metabolic process | GO:0051052 | 100 | 0.034 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.034 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.033 | |
| double strand break repair via break induced replication | GO:0000727 | 25 | 0.033 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.033 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.032 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.031 | |
| organelle assembly | GO:0070925 | 118 | 0.030 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.030 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 224 | 0.029 | |
| double strand break repair via single strand annealing | GO:0045002 | 7 | 0.029 | |
| establishment of organelle localization | GO:0051656 | 96 | 0.029 | |
| regulation of cell cycle checkpoint | GO:1901976 | 6 | 0.028 | |
| cellular component disassembly | GO:0022411 | 86 | 0.028 | |
| regulation of meiosis | GO:0040020 | 42 | 0.028 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.027 | |
| mitotic cell cycle phase transition | GO:0044772 | 141 | 0.027 | |
| negative regulation of cell division | GO:0051782 | 66 | 0.026 | |
| positive regulation of transcription initiation from rna polymerase ii promoter | GO:0060261 | 13 | 0.026 | |
| cellular response to abiotic stimulus | GO:0071214 | 62 | 0.025 | |
| ion transport | GO:0006811 | 274 | 0.025 | |
| response to chemical | GO:0042221 | 390 | 0.025 | |
| spindle organization | GO:0007051 | 37 | 0.024 | |
| regulation of mitotic metaphase anaphase transition | GO:0030071 | 27 | 0.024 | |
| cell communication | GO:0007154 | 345 | 0.023 | |
| sexual reproduction | GO:0019953 | 216 | 0.023 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.023 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.023 | |
| atp metabolic process | GO:0046034 | 251 | 0.023 | |
| regulation of proteolysis | GO:0030162 | 44 | 0.023 | |
| nucleus organization | GO:0006997 | 62 | 0.022 | |
| protein processing | GO:0016485 | 64 | 0.022 | |
| regulation of cell cycle process | GO:0010564 | 150 | 0.022 | |
| methylation | GO:0032259 | 101 | 0.021 | |
| sexual sporulation | GO:0034293 | 113 | 0.021 | |
| positive regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045899 | 11 | 0.021 | |
| negative regulation of cell cycle g2 m phase transition | GO:1902750 | 5 | 0.021 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.020 | |
| nuclear transport | GO:0051169 | 165 | 0.020 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.020 | |
| negative regulation of mitotic metaphase anaphase transition | GO:0045841 | 23 | 0.020 | |
| dna dependent dna replication maintenance of fidelity | GO:0045005 | 14 | 0.020 | |
| regulation of protein processing | GO:0070613 | 34 | 0.019 | |
| mitotic sister chromatid separation | GO:0051306 | 26 | 0.019 | |
| dna biosynthetic process | GO:0071897 | 33 | 0.019 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.019 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 51 | 0.019 | |
| chromatin assembly or disassembly | GO:0006333 | 60 | 0.019 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.018 | |
| postreplication repair | GO:0006301 | 24 | 0.018 | |
| dna templated transcription initiation | GO:0006352 | 71 | 0.018 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.018 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.017 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 45 | 0.017 | |
| proteolysis | GO:0006508 | 268 | 0.017 | |
| regulation of dna dependent dna replication | GO:0090329 | 37 | 0.017 | |
| cellular developmental process | GO:0048869 | 191 | 0.017 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 267 | 0.017 | |
| protein dna complex disassembly | GO:0032986 | 20 | 0.017 | |
| dna replication okazaki fragment processing | GO:0033567 | 7 | 0.017 | |
| single organism reproductive process | GO:0044702 | 159 | 0.017 | |
| negative regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032435 | 24 | 0.017 | |
| cell morphogenesis | GO:0000902 | 30 | 0.016 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.016 | |
| mitotic cell cycle checkpoint | GO:0007093 | 56 | 0.016 | |
| metaphase anaphase transition of mitotic cell cycle | GO:0007091 | 28 | 0.016 | |
| macromolecular complex disassembly | GO:0032984 | 80 | 0.016 | |
| microtubule polymerization | GO:0046785 | 30 | 0.016 | |
| intracellular protein transport | GO:0006886 | 319 | 0.016 | |
| positive regulation of dna templated transcription initiation | GO:2000144 | 13 | 0.016 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.016 | |
| negative regulation of chromosome organization | GO:2001251 | 39 | 0.016 | |
| cell budding | GO:0007114 | 48 | 0.015 | |
| organelle localization | GO:0051640 | 128 | 0.015 | |
| negative regulation of nuclear division | GO:0051784 | 62 | 0.015 | |
| response to uv | GO:0009411 | 4 | 0.015 | |
| negative regulation of chromosome segregation | GO:0051985 | 25 | 0.015 | |
| growth of unicellular organism as a thread of attached cells | GO:0070783 | 105 | 0.015 | |
| regulation of transcription initiation from rna polymerase ii promoter | GO:0060260 | 19 | 0.015 | |
| mitochondrion inheritance | GO:0000001 | 21 | 0.015 | |
| positive regulation of cytoskeleton organization | GO:0051495 | 39 | 0.014 | |
| gene conversion at mating type locus | GO:0007534 | 11 | 0.014 | |
| response to endogenous stimulus | GO:0009719 | 26 | 0.014 | |
| phosphorylation | GO:0016310 | 291 | 0.013 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.013 | |
| transposition | GO:0032196 | 20 | 0.013 | |
| proteasomal protein catabolic process | GO:0010498 | 141 | 0.013 | |
| amino sugar metabolic process | GO:0006040 | 20 | 0.013 | |
| regulation of metaphase anaphase transition of cell cycle | GO:1902099 | 27 | 0.013 | |
| covalent chromatin modification | GO:0016569 | 119 | 0.013 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.013 | |
| regulation of mitotic cell cycle | GO:0007346 | 107 | 0.013 | |
| establishment or maintenance of cell polarity | GO:0007163 | 96 | 0.013 | |
| positive regulation of cell communication | GO:0010647 | 28 | 0.012 | |
| histone modification | GO:0016570 | 119 | 0.012 | |
| cellular component morphogenesis | GO:0032989 | 97 | 0.012 | |
| spindle assembly | GO:0051225 | 9 | 0.012 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.012 | |
| regulation of mitosis | GO:0007088 | 65 | 0.012 | |
| peptidyl amino acid modification | GO:0018193 | 116 | 0.012 | |
| double strand break repair via nonhomologous end joining | GO:0006303 | 27 | 0.012 | |
| chromatin modification | GO:0016568 | 200 | 0.012 | |
| negative regulation of metaphase anaphase transition of cell cycle | GO:1902100 | 23 | 0.012 | |
| negative regulation of mitotic sister chromatid separation | GO:2000816 | 23 | 0.012 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.012 | |
| anaphase promoting complex dependent proteasomal ubiquitin dependent protein catabolic process | GO:0031145 | 35 | 0.012 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.012 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.012 | |
| transposition rna mediated | GO:0032197 | 17 | 0.011 | |
| mitotic spindle assembly checkpoint | GO:0007094 | 23 | 0.011 | |
| cellular transition metal ion homeostasis | GO:0046916 | 59 | 0.011 | |
| mitotic recombination | GO:0006312 | 55 | 0.011 | |
| regulation of transposition rna mediated | GO:0010525 | 15 | 0.011 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.011 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.011 | |
| metaphase anaphase transition of cell cycle | GO:0044784 | 28 | 0.011 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.011 | |
| negative regulation of dna recombination | GO:0045910 | 13 | 0.011 | |
| protein phosphorylation | GO:0006468 | 197 | 0.011 | |
| establishment of sister chromatid cohesion | GO:0034085 | 17 | 0.011 | |
| negative regulation of meiotic cell cycle | GO:0051447 | 24 | 0.011 | |
| protein localization to nucleus | GO:0034504 | 74 | 0.011 | |
| reproductive process in single celled organism | GO:0022413 | 145 | 0.011 | |
| negative regulation of mitosis | GO:0045839 | 39 | 0.010 | |
| cytogamy | GO:0000755 | 10 | 0.010 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.010 | |
| mitotic sister chromatid cohesion | GO:0007064 | 38 | 0.010 | |
| nucleosome assembly | GO:0006334 | 16 | 0.010 | |
| positive regulation of response to stimulus | GO:0048584 | 37 | 0.010 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.010 | |
