| mrna splicing via spliceosome | GO:0000398 | 108 | 0.971 | |
| rna splicing via transesterification reactions | GO:0000375 | 118 | 0.969 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 109 | 0.927 | |
| mrna processing | GO:0006397 | 185 | 0.914 | |
| rna splicing | GO:0008380 | 131 | 0.779 | |
| spliceosomal complex assembly | GO:0000245 | 21 | 0.710 | |
| mrna metabolic process | GO:0016071 | 269 | 0.681 | |
| mrna splice site selection | GO:0006376 | 8 | 0.188 | |
| response to chemical | GO:0042221 | 390 | 0.126 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.121 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.118 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.109 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.108 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.108 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.094 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.094 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.088 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.070 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.068 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.068 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.067 | |
| regulation of biological quality | GO:0065008 | 391 | 0.067 | |
| response to organic substance | GO:0010033 | 182 | 0.066 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.058 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.051 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.049 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.049 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.047 | |
| protein phosphorylation | GO:0006468 | 197 | 0.047 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.041 | |
| phosphorylation | GO:0016310 | 291 | 0.040 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.037 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.036 | |
| protein catabolic process | GO:0030163 | 221 | 0.035 | |
| ncrna processing | GO:0034470 | 330 | 0.035 | |
| cellular response to oxidative stress | GO:0034599 | 94 | 0.034 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.034 | |
| mitochondrion organization | GO:0007005 | 261 | 0.033 | |
| establishment of protein localization | GO:0045184 | 367 | 0.033 | |
| response to oxidative stress | GO:0006979 | 99 | 0.032 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.031 | |
| microtubule based process | GO:0007017 | 117 | 0.031 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.030 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.029 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.029 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.029 | |
| coenzyme biosynthetic process | GO:0009108 | 66 | 0.029 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.028 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.028 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.027 | |
| fungal type cell wall organization | GO:0031505 | 145 | 0.027 | |
| single organism catabolic process | GO:0044712 | 619 | 0.027 | |
| cell communication | GO:0007154 | 345 | 0.026 | |
| organelle assembly | GO:0070925 | 118 | 0.026 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.026 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.025 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.025 | |
| chromatin modification | GO:0016568 | 200 | 0.025 | |
| single organism signaling | GO:0044700 | 208 | 0.024 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.024 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.024 | |
| chromatin organization | GO:0006325 | 242 | 0.024 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.024 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.023 | |
| regulation of localization | GO:0032879 | 127 | 0.023 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.022 | |
| single organism cellular localization | GO:1902580 | 375 | 0.022 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.022 | |
| cell wall organization | GO:0071555 | 146 | 0.021 | |
| developmental process | GO:0032502 | 261 | 0.021 | |
| fungal type cell wall organization or biogenesis | GO:0071852 | 169 | 0.021 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.021 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.021 | |
| signal transduction | GO:0007165 | 208 | 0.021 | |
| protein transport | GO:0015031 | 345 | 0.021 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.020 | |
| signaling | GO:0023052 | 208 | 0.020 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.020 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.019 | |
| multi organism cellular process | GO:0044764 | 120 | 0.019 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.019 | |
| regulation of cell communication | GO:0010646 | 124 | 0.019 | |
| transition metal ion transport | GO:0000041 | 45 | 0.019 | |
| golgi vesicle transport | GO:0048193 | 188 | 0.019 | |
| protein localization to membrane | GO:0072657 | 102 | 0.019 | |
| mitotic nuclear division | GO:0007067 | 131 | 0.019 | |
| filamentous growth | GO:0030447 | 124 | 0.019 | |
| reproductive process | GO:0022414 | 248 | 0.019 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.019 | |
| cytoskeleton organization | GO:0007010 | 230 | 0.018 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.018 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.018 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.018 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.018 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.018 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.018 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.017 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.017 | |
| invasive filamentous growth | GO:0036267 | 65 | 0.017 | |
| microtubule cytoskeleton organization | GO:0000226 | 109 | 0.017 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.017 | |
| translation | GO:0006412 | 230 | 0.017 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.017 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.017 | |
| cellular carbohydrate metabolic process | GO:0044262 | 135 | 0.016 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.016 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.016 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.016 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.016 | |
| protein targeting | GO:0006605 | 272 | 0.016 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.016 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.016 | |
| ion transport | GO:0006811 | 274 | 0.016 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.016 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.015 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.015 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.015 | |
| filamentous growth of a population of unicellular organisms | GO:0044182 | 109 | 0.015 | |
| protein dna complex assembly | GO:0065004 | 105 | 0.015 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.015 | |
| sexual reproduction | GO:0019953 | 216 | 0.015 | |
| cell division | GO:0051301 | 205 | 0.015 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.015 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.014 | |
| dna repair | GO:0006281 | 236 | 0.014 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.014 | |
| lipid metabolic process | GO:0006629 | 269 | 0.014 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.014 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.014 | |
| cellular ketone metabolic process | GO:0042180 | 63 | 0.014 | |
| regulation of signaling | GO:0023051 | 119 | 0.014 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.014 | |
| protein complex assembly | GO:0006461 | 302 | 0.014 | |
| regulation of phosphorylation | GO:0042325 | 86 | 0.014 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.013 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.013 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.013 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.013 | |
| rna transport | GO:0050658 | 92 | 0.013 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.013 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 262 | 0.012 | |
| regulation of rna splicing | GO:0043484 | 3 | 0.012 | |
| atp metabolic process | GO:0046034 | 251 | 0.012 | |
| growth of unicellular organism as a thread of attached cells | GO:0070783 | 105 | 0.012 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.012 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.012 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.012 | |
| response to oxygen containing compound | GO:1901700 | 61 | 0.012 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.012 | |
| response to osmotic stress | GO:0006970 | 83 | 0.012 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.012 | |
| mrna 5 splice site recognition | GO:0000395 | 2 | 0.012 | |
| covalent chromatin modification | GO:0016569 | 119 | 0.012 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.012 | |
| trna metabolic process | GO:0006399 | 151 | 0.012 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.012 | |
| regulation of protein modification process | GO:0031399 | 110 | 0.012 | |
| multi organism process | GO:0051704 | 233 | 0.012 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.012 | |
| invasive growth in response to glucose limitation | GO:0001403 | 61 | 0.012 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.012 | |
| rrna metabolic process | GO:0016072 | 244 | 0.012 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.011 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.011 | |
| detection of stimulus | GO:0051606 | 4 | 0.011 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.011 | |
| single organism reproductive process | GO:0044702 | 159 | 0.011 | |
| cofactor biosynthetic process | GO:0051188 | 80 | 0.011 | |
| cellular response to starvation | GO:0009267 | 90 | 0.011 | |
| chromosome segregation | GO:0007059 | 159 | 0.011 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.011 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.011 | |
| phospholipid biosynthetic process | GO:0008654 | 89 | 0.011 | |
| single organism nuclear import | GO:1902593 | 56 | 0.011 | |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.011 | |
| coenzyme metabolic process | GO:0006732 | 104 | 0.011 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.010 | |
| cellular response to nutrient levels | GO:0031669 | 144 | 0.010 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 89 | 0.010 | |
| organelle localization | GO:0051640 | 128 | 0.010 | |
| mrna catabolic process | GO:0006402 | 93 | 0.010 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.010 | |
