| rna splicing via transesterification reactions | GO:0000375 | 118 | 0.925 | |
| mrna processing | GO:0006397 | 185 | 0.836 | |
| mrna splicing via spliceosome | GO:0000398 | 108 | 0.715 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 109 | 0.635 | |
| mrna metabolic process | GO:0016071 | 269 | 0.533 | |
| rna splicing | GO:0008380 | 131 | 0.497 | |
| translation | GO:0006412 | 230 | 0.152 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.131 | |
| cation transport | GO:0006812 | 166 | 0.083 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.080 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.080 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.068 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.064 | Yeast |
| signaling | GO:0023052 | 208 | 0.060 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.059 | |
| multi organism process | GO:0051704 | 233 | 0.056 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.055 | |
| regulation of biological quality | GO:0065008 | 391 | 0.053 | Yeast |
| cation homeostasis | GO:0055080 | 105 | 0.049 | |
| nucleobase containing compound transport | GO:0015931 | 124 | 0.048 | |
| metal ion transport | GO:0030001 | 75 | 0.048 | |
| homeostatic process | GO:0042592 | 227 | 0.046 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.046 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.044 | |
| regulation of translation | GO:0006417 | 89 | 0.044 | |
| spliceosomal complex assembly | GO:0000245 | 21 | 0.043 | |
| mrna splice site selection | GO:0006376 | 8 | 0.042 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.038 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.038 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.037 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.036 | |
| rna catabolic process | GO:0006401 | 118 | 0.036 | Yeast |
| dna recombination | GO:0006310 | 172 | 0.036 | |
| multi organism cellular process | GO:0044764 | 120 | 0.036 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.035 | |
| cell communication | GO:0007154 | 345 | 0.034 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.033 | Yeast |
| ion transport | GO:0006811 | 274 | 0.032 | |
| response to organic substance | GO:0010033 | 182 | 0.032 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 73 | 0.031 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.031 | |
| positive regulation of translation | GO:0045727 | 34 | 0.031 | |
| positive regulation of protein metabolic process | GO:0051247 | 93 | 0.030 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.029 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.029 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.029 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.029 | |
| ion homeostasis | GO:0050801 | 118 | 0.029 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.028 | Yeast |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.028 | Yeast |
| translational initiation | GO:0006413 | 56 | 0.028 | |
| signal transduction | GO:0007165 | 208 | 0.028 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.027 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.027 | |
| cell development | GO:0048468 | 107 | 0.026 | |
| nuclear division | GO:0000280 | 263 | 0.026 | |
| chemical homeostasis | GO:0048878 | 137 | 0.025 | |
| sister chromatid segregation | GO:0000819 | 93 | 0.024 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.023 | Yeast |
| lipid metabolic process | GO:0006629 | 269 | 0.023 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.022 | |
| mrna catabolic process | GO:0006402 | 93 | 0.021 | Yeast |
| establishment of protein localization | GO:0045184 | 367 | 0.021 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.021 | |
| sexual reproduction | GO:0019953 | 216 | 0.021 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.021 | |
| single organism catabolic process | GO:0044712 | 619 | 0.021 | |
| sexual sporulation resulting in formation of a cellular spore | GO:0043935 | 113 | 0.020 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.020 | Yeast |
| fungal type cell wall organization | GO:0031505 | 145 | 0.020 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.020 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.020 | |
| cellular carbohydrate metabolic process | GO:0044262 | 135 | 0.020 | |
| divalent inorganic cation transport | GO:0072511 | 26 | 0.020 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.020 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.020 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.019 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.018 | |
| developmental process | GO:0032502 | 261 | 0.018 | |
| positive regulation of programmed cell death | GO:0043068 | 3 | 0.018 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.018 | |
| divalent metal ion transport | GO:0070838 | 17 | 0.018 | |
| rrna processing | GO:0006364 | 227 | 0.018 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.018 | |
| cofactor biosynthetic process | GO:0051188 | 80 | 0.018 | |
| porphyrin containing compound metabolic process | GO:0006778 | 15 | 0.018 | |
| response to chemical | GO:0042221 | 390 | 0.017 | |
| single organism signaling | GO:0044700 | 208 | 0.017 | |
| cellular homeostasis | GO:0019725 | 138 | 0.017 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.017 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.017 | |
| reproductive process | GO:0022414 | 248 | 0.016 | |
| cellular chemical homeostasis | GO:0055082 | 123 | 0.016 | |
| response to nutrient levels | GO:0031667 | 150 | 0.016 | |
| gene silencing | GO:0016458 | 151 | 0.016 | |
| ascospore formation | GO:0030437 | 107 | 0.016 | |
| ncrna processing | GO:0034470 | 330 | 0.016 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.016 | |
| cell differentiation | GO:0030154 | 161 | 0.016 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.016 | |
| organelle fission | GO:0048285 | 272 | 0.016 | |
| organic hydroxy compound transport | GO:0015850 | 41 | 0.016 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.016 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.016 | |
| membrane organization | GO:0061024 | 276 | 0.015 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.015 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.015 | |
| anatomical structure homeostasis | GO:0060249 | 74 | 0.015 | |
| phosphatidylinositol metabolic process | GO:0046488 | 62 | 0.015 | |
| proteolysis | GO:0006508 | 268 | 0.015 | |
| dephosphorylation | GO:0016311 | 127 | 0.015 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.015 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.015 | Yeast |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.015 | |
| cellular ion homeostasis | GO:0006873 | 112 | 0.015 | |
| glycerophospholipid metabolic process | GO:0006650 | 98 | 0.014 | |
| regulation of chromosome organization | GO:0033044 | 66 | 0.014 | |
| protein localization to organelle | GO:0033365 | 337 | 0.014 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.014 | |
| heme biosynthetic process | GO:0006783 | 14 | 0.014 | |
| cell death | GO:0008219 | 30 | 0.014 | |
| rrna metabolic process | GO:0016072 | 244 | 0.014 | |
| nucleocytoplasmic transport | GO:0006913 | 163 | 0.013 | |
| reciprocal meiotic recombination | GO:0007131 | 54 | 0.013 | |
| anatomical structure development | GO:0048856 | 160 | 0.013 | |
| organelle assembly | GO:0070925 | 118 | 0.013 | Yeast |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.013 | Yeast |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 136 | 0.013 | |
| cell wall organization | GO:0071555 | 146 | 0.013 | |
| cellular divalent inorganic cation homeostasis | GO:0072503 | 21 | 0.013 | |
| tetrapyrrole biosynthetic process | GO:0033014 | 14 | 0.013 | |
| sphingolipid metabolic process | GO:0006665 | 41 | 0.012 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.012 | |
| programmed cell death | GO:0012501 | 30 | 0.012 | |
| meiosis i | GO:0007127 | 92 | 0.012 | |
| gene silencing by rna | GO:0031047 | 3 | 0.012 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.012 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.012 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.012 | |
| response to hypoxia | GO:0001666 | 4 | 0.012 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.012 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 262 | 0.012 | |
| carboxylic acid biosynthetic process | GO:0046394 | 152 | 0.012 | |
| death | GO:0016265 | 30 | 0.011 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.011 | |
| chromatin modification | GO:0016568 | 200 | 0.011 | |
| pigment biosynthetic process | GO:0046148 | 22 | 0.011 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.011 | |
| phosphorylation | GO:0016310 | 291 | 0.011 | |
| intracellular signal transduction | GO:0035556 | 112 | 0.011 | |
| detection of chemical stimulus | GO:0009593 | 3 | 0.011 | |
| protein transport | GO:0015031 | 345 | 0.011 | |
| heme metabolic process | GO:0042168 | 15 | 0.011 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 262 | 0.011 | |
| rna localization | GO:0006403 | 112 | 0.011 | |
| membrane lipid metabolic process | GO:0006643 | 67 | 0.010 | |
| regulation of nuclear division | GO:0051783 | 103 | 0.010 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.010 | |
| sporulation | GO:0043934 | 132 | 0.010 | |
| chromosome segregation | GO:0007059 | 159 | 0.010 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.010 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.010 | |
| establishment of rna localization | GO:0051236 | 92 | 0.010 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.010 | |
| pigment metabolic process | GO:0042440 | 23 | 0.010 | |
