| protein transport | GO:0015031 | 345 | 0.455 | |
| establishment of protein localization | GO:0045184 | 367 | 0.435 | |
| vacuolar transport | GO:0007034 | 145 | 0.376 | |
| intracellular protein transport | GO:0006886 | 319 | 0.331 | |
| single organism developmental process | GO:0044767 | 258 | 0.206 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.205 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.197 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.186 | |
| protein localization to organelle | GO:0033365 | 337 | 0.156 | |
| cellular carbohydrate metabolic process | GO:0044262 | 135 | 0.155 | |
| response to chemical | GO:0042221 | 390 | 0.143 | |
| protein targeting to vacuole | GO:0006623 | 91 | 0.143 | |
| protein localization to vacuole | GO:0072665 | 92 | 0.142 | |
| proteolysis | GO:0006508 | 268 | 0.142 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.140 | |
| protein catabolic process | GO:0030163 | 221 | 0.129 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.122 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.116 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.110 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.108 | |
| anatomical structure development | GO:0048856 | 160 | 0.106 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.105 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.105 | |
| protein targeting | GO:0006605 | 272 | 0.098 | |
| developmental process | GO:0032502 | 261 | 0.097 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.097 | |
| regulation of biological quality | GO:0065008 | 391 | 0.087 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.087 | |
| single organism carbohydrate catabolic process | GO:0044724 | 73 | 0.086 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.086 | |
| cellular response to oxidative stress | GO:0034599 | 94 | 0.085 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.083 | |
| cellular ketone metabolic process | GO:0042180 | 63 | 0.082 | |
| single organism cellular localization | GO:1902580 | 375 | 0.079 | |
| endosomal transport | GO:0016197 | 86 | 0.077 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.074 | |
| membrane organization | GO:0061024 | 276 | 0.073 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.073 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.071 | |
| establishment of protein localization to vacuole | GO:0072666 | 91 | 0.071 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.070 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.070 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.070 | |
| single organism catabolic process | GO:0044712 | 619 | 0.068 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.064 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.061 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.053 | |
| cellular amino acid biosynthetic process | GO:0008652 | 118 | 0.052 | |
| cellular developmental process | GO:0048869 | 191 | 0.051 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.051 | |
| peptidyl amino acid modification | GO:0018193 | 116 | 0.051 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.050 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.050 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.049 | |
| regulation of protein localization | GO:0032880 | 62 | 0.047 | |
| alpha amino acid metabolic process | GO:1901605 | 124 | 0.046 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.045 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.044 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.044 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.044 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.043 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.043 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.039 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.039 | |
| response to osmotic stress | GO:0006970 | 83 | 0.037 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.036 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.035 | |
| response to nitrogen compound | GO:1901698 | 18 | 0.034 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.034 | |
| single organism membrane organization | GO:0044802 | 275 | 0.034 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.032 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.032 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.031 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.031 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.030 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 137 | 0.030 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.030 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.030 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.028 | |
| membrane fusion | GO:0061025 | 73 | 0.028 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.028 | |
| cellular response to osmotic stress | GO:0071470 | 50 | 0.028 | |
| endomembrane system organization | GO:0010256 | 74 | 0.027 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.027 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.027 | |
| response to organic substance | GO:0010033 | 182 | 0.027 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.026 | |
| cellular amide metabolic process | GO:0043603 | 59 | 0.025 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.025 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.024 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.023 | |
| metal ion transport | GO:0030001 | 75 | 0.023 | |
| single organism membrane fusion | GO:0044801 | 71 | 0.022 | |
| protein phosphorylation | GO:0006468 | 197 | 0.022 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.022 | |
| response to oxygen containing compound | GO:1901700 | 61 | 0.022 | |
| small molecule biosynthetic process | GO:0044283 | 258 | 0.021 | |
| proteasomal protein catabolic process | GO:0010498 | 141 | 0.020 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.020 | |
| negative regulation of signal transduction | GO:0009968 | 30 | 0.020 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.020 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.019 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.019 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.019 | |
| growth | GO:0040007 | 157 | 0.019 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.018 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.018 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 109 | 0.018 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.018 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.017 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.017 | |
| carbohydrate catabolic process | GO:0016052 | 77 | 0.017 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.017 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.016 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.016 | |
| regulation of transport | GO:0051049 | 85 | 0.016 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.016 | |
| regulation of cell communication | GO:0010646 | 124 | 0.016 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.015 | |
| phosphorylation | GO:0016310 | 291 | 0.015 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.015 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.015 | |
| dna repair | GO:0006281 | 236 | 0.015 | |
| cell communication | GO:0007154 | 345 | 0.014 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.014 | |
| carboxylic acid biosynthetic process | GO:0046394 | 152 | 0.014 | |
| cell morphogenesis | GO:0000902 | 30 | 0.014 | |
| single organism reproductive process | GO:0044702 | 159 | 0.014 | |
| golgi vesicle transport | GO:0048193 | 188 | 0.014 | |
| cellular component morphogenesis | GO:0032989 | 97 | 0.013 | |
| guanosine containing compound catabolic process | GO:1901069 | 109 | 0.013 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.013 | |
| single organism signaling | GO:0044700 | 208 | 0.013 | |
| cellular component disassembly | GO:0022411 | 86 | 0.013 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.012 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.012 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.012 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.012 | |
| regulation of signaling | GO:0023051 | 119 | 0.012 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.012 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.012 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.012 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.012 | |
| alpha amino acid biosynthetic process | GO:1901607 | 91 | 0.012 | |
| response to oxidative stress | GO:0006979 | 99 | 0.012 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.012 | |
| cell growth | GO:0016049 | 89 | 0.012 | |
| regulation of cellular amine metabolic process | GO:0033238 | 21 | 0.012 | |
| protein complex assembly | GO:0006461 | 302 | 0.012 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.012 | |
| regulation of phosphorylation | GO:0042325 | 86 | 0.011 | |
| regulation of nucleotide metabolic process | GO:0006140 | 110 | 0.011 | |
| hexose catabolic process | GO:0019320 | 24 | 0.011 | |
| response to nutrient levels | GO:0031667 | 150 | 0.011 | |
| filamentous growth | GO:0030447 | 124 | 0.011 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 49 | 0.011 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.011 | |
| ascospore formation | GO:0030437 | 107 | 0.011 | |
| endocytosis | GO:0006897 | 90 | 0.010 | |
| monosaccharide metabolic process | GO:0005996 | 83 | 0.010 | |
| regulation of intracellular signal transduction | GO:1902531 | 78 | 0.010 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.010 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.010 | |
| regulation of translation in response to stress | GO:0043555 | 5 | 0.010 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.010 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 49 | 0.010 | |
| signaling | GO:0023052 | 208 | 0.010 | |
