IMP: Integrative Multi-species Prediction

Saccharomyces cerevisiae

228 known processes

CHD1 (YER164W)

Chd1p

SGD: S000000966
Entrez: 856911
UniProtKB: P32657

Process Predictions
Disease Predictions

CHD1 biological process predictions

Show only novel predictionsHighlight processes of functional analogs

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Biological process	GO term ID	Process size	Probability	Func Analog Org
positive regulation of biosynthetic process	GO:0009891	336	0.981
regulation of transcription from rna polymerase ii promoter	GO:0006357	394	0.980
positive regulation of transcription from rna polymerase ii promoter	GO:0045944	252	0.980
positive regulation of transcription dna templated	GO:0045893	286	0.979
positive regulation of gene expression	GO:0010628	321	0.963
chromatin organization	GO:0006325	242	0.932
positive regulation of rna biosynthetic process	GO:1902680	286	0.921
positive regulation of rna metabolic process	GO:0051254	294	0.887
positive regulation of nucleobase containing compound metabolic process	GO:0045935	409	0.822
positive regulation of nitrogen compound metabolic process	GO:0051173	412	0.813
dna templated transcription elongation	GO:0006354	91	0.792
positive regulation of nucleic acid templated transcription	GO:1903508	286	0.773
positive regulation of macromolecule biosynthetic process	GO:0010557	325	0.773
negative regulation of transcription dna templated	GO:0045892	258	0.751
positive regulation of macromolecule metabolic process	GO:0010604	394	0.722
positive regulation of cellular biosynthetic process	GO:0031328	336	0.683
chromatin silencing	GO:0006342	147	0.667
transcription elongation from rna polymerase ii promoter	GO:0006368	81	0.633
covalent chromatin modification	GO:0016569	119	0.617
negative regulation of transcription from rna polymerase ii promoter	GO:0000122	137	0.597
protein complex biogenesis	GO:0070271	314	0.591
chromatin modification	GO:0016568	200	0.576
regulation of cellular component organization	GO:0051128	334	0.557
chromatin assembly or disassembly	GO:0006333	60	0.531
dna templated transcription initiation	GO:0006352	71	0.498
negative regulation of rna metabolic process	GO:0051253	262	0.478
cellular response to chemical stimulus	GO:0070887	315	0.474
negative regulation of biosynthetic process	GO:0009890	312	0.470
regulation of dna templated transcription elongation	GO:0032784	44	0.422
negative regulation of cellular macromolecule biosynthetic process	GO:2000113	289	0.395
regulation of organelle organization	GO:0033043	243	0.391
negative regulation of nitrogen compound metabolic process	GO:0051172	300	0.390
cellular response to organic substance	GO:0071310	159	0.378
positive regulation of transcription elongation from rna polymerase ii promoter	GO:0032968	38	0.357
protein complex assembly	GO:0006461	302	0.354
growth of unicellular organism as a thread of attached cells	GO:0070783	105	0.339
dna dependent dna replication	GO:0006261	115	0.316
gene silencing	GO:0016458	151	0.311
cytoskeleton organization	GO:0007010	230	0.310
single organism developmental process	GO:0044767	258	0.306	Worm
regulation of transcription initiation from rna polymerase ii promoter	GO:0060260	19	0.292
multi organism process	GO:0051704	233	0.283
negative regulation of macromolecule biosynthetic process	GO:0010558	291	0.260
termination of rna polymerase ii transcription	GO:0006369	26	0.246
chromatin silencing at telomere	GO:0006348	84	0.244
transcription from rna polymerase i promoter	GO:0006360	63	0.238
regulation of gene expression epigenetic	GO:0040029	147	0.231
rrna metabolic process	GO:0016072	244	0.230
negative regulation of rna biosynthetic process	GO:1902679	260	0.228
regulation of dna templated transcription initiation	GO:2000142	19	0.227
regulation of dna metabolic process	GO:0051052	100	0.220
negative regulation of gene expression	GO:0010629	312	0.216
chromatin assembly	GO:0031497	35	0.213
response to external stimulus	GO:0009605	158	0.213
negative regulation of gene expression epigenetic	GO:0045814	147	0.208
regulation of histone modification	GO:0031056	18	0.208
negative regulation of cellular biosynthetic process	GO:0031327	312	0.205
cellular response to dna damage stimulus	GO:0006974	287	0.204
cell growth	GO:0016049	89	0.202
negative regulation of nucleic acid templated transcription	GO:1903507	260	0.201
chromatin remodeling	GO:0006338	80	0.200
cellular response to nutrient levels	GO:0031669	144	0.198
cellular response to extracellular stimulus	GO:0031668	150	0.196
cellular response to pheromone	GO:0071444	88	0.196
regulation of filamentous growth	GO:0010570	38	0.196
anatomical structure development	GO:0048856	160	0.191	Worm
mrna processing	GO:0006397	185	0.190
positive regulation of transcription from rna polymerase ii promoter in response to stress	GO:0036003	33	0.187
filamentous growth	GO:0030447	124	0.182
response to pheromone	GO:0019236	92	0.177
pseudohyphal growth	GO:0007124	75	0.168
negative regulation of cellular metabolic process	GO:0031324	407	0.167
nucleosome assembly	GO:0006334	16	0.164
negative regulation of transcription from rna polymerase ii promoter by pheromones	GO:0046020	10	0.164
cellular developmental process	GO:0048869	191	0.162
regulation of transcription elongation from rna polymerase ii promoter	GO:0034243	40	0.161
protein complex disassembly	GO:0043241	70	0.160
dna replication	GO:0006260	147	0.157
regulation of chromatin modification	GO:1903308	23	0.142
mitotic cell cycle process	GO:1903047	294	0.139
regulation of biological quality	GO:0065008	391	0.139
positive regulation of dna templated transcription elongation	GO:0032786	42	0.133
protein dna complex subunit organization	GO:0071824	153	0.133
filamentous growth of a population of unicellular organisms	GO:0044182	109	0.132
histone modification	GO:0016570	119	0.132
negative regulation of nucleobase containing compound metabolic process	GO:0045934	295	0.130
mrna 3 end processing	GO:0031124	54	0.127
cellular response to nutrient	GO:0031670	50	0.123
protein dna complex assembly	GO:0065004	105	0.123
regulation of growth of unicellular organism as a thread of attached cells	GO:0070784	31	0.122
ncrna processing	GO:0034470	330	0.122
regulation of dna templated transcription in response to stress	GO:0043620	51	0.120
transcription initiation from rna polymerase ii promoter	GO:0006367	55	0.114
regulation of response to stimulus	GO:0048583	157	0.112
anatomical structure morphogenesis	GO:0009653	160	0.111
response to extracellular stimulus	GO:0009991	156	0.108
reproductive process	GO:0022414	248	0.104
negative regulation of chromatin modification	GO:1903309	9	0.098
cell communication	GO:0007154	345	0.097
macromolecular complex disassembly	GO:0032984	80	0.095
regulation of response to stress	GO:0080134	57	0.095
regulation of filamentous growth of a population of unicellular organisms	GO:1900428	36	0.092
regulation of chromatin silencing	GO:0031935	39	0.088
peptidyl amino acid modification	GO:0018193	116	0.087
regulation of chromatin organization	GO:1902275	23	0.087
dna repair	GO:0006281	236	0.086
regulation of protein complex assembly	GO:0043254	77	0.086
regulation of histone exchange	GO:1900049	4	0.085
negative regulation of cellular component organization	GO:0051129	109	0.084
regulation of chromosome organization	GO:0033044	66	0.082
alcohol biosynthetic process	GO:0046165	75	0.082
response to nutrient	GO:0007584	52	0.081
meiotic cell cycle	GO:0051321	272	0.081
dna packaging	GO:0006323	55	0.077
negative regulation of chromosome organization	GO:2001251	39	0.073
regulation of dna dependent dna replication	GO:0090329	37	0.072
g2 m transition of mitotic cell cycle	GO:0000086	38	0.072
organic hydroxy compound metabolic process	GO:1901615	125	0.072
nucleosome organization	GO:0034728	63	0.070
regulation of cell cycle	GO:0051726	195	0.068
cell fate commitment	GO:0045165	32	0.066
negative regulation of chromatin silencing at silent mating type cassette	GO:0061186	11	0.065
chromatin silencing at rdna	GO:0000183	32	0.063
atp dependent chromatin remodeling	GO:0043044	36	0.062
cell cycle phase transition	GO:0044770	144	0.062
alcohol metabolic process	GO:0006066	112	0.061
regulation of transcription by chromatin organization	GO:0034401	19	0.061
negative regulation of macromolecule metabolic process	GO:0010605	375	0.061
g1 s transition of mitotic cell cycle	GO:0000082	64	0.061
regulation of dna dependent dna replication initiation	GO:0030174	21	0.060
ribonucleoprotein complex subunit organization	GO:0071826	152	0.060
regulation of cellular catabolic process	GO:0031329	195	0.059
multi organism reproductive process	GO:0044703	216	0.058
response to salt stress	GO:0009651	34	0.057
cell wall organization or biogenesis	GO:0071554	190	0.055
developmental process	GO:0032502	261	0.055	Worm
response to organic substance	GO:0010033	182	0.054
meiotic nuclear division	GO:0007126	163	0.053
response to chemical	GO:0042221	390	0.053
regulation of gene silencing	GO:0060968	41	0.053
cellular response to external stimulus	GO:0071496	150	0.052
histone exchange	GO:0043486	18	0.051
sexual reproduction	GO:0019953	216	0.048
nuclear division	GO:0000280	263	0.046
regulation of transcription from rna polymerase ii promoter in response to stress	GO:0043618	51	0.046
vesicle mediated transport	GO:0016192	335	0.046
mrna metabolic process	GO:0016071	269	0.044
dna conformation change	GO:0071103	98	0.044
heterochromatin organization	GO:0070828	11	0.043
ribosome biogenesis	GO:0042254	335	0.042
nucleus organization	GO:0006997	62	0.042
carbohydrate catabolic process	GO:0016052	77	0.042
cell differentiation	GO:0030154	161	0.040
cellular carbohydrate metabolic process	GO:0044262	135	0.040
methylation	GO:0032259	101	0.040
cellular component morphogenesis	GO:0032989	97	0.039
response to osmotic stress	GO:0006970	83	0.039
regulation of cellular component biogenesis	GO:0044087	112	0.039
macromolecule methylation	GO:0043414	85	0.038
dna templated transcription termination	GO:0006353	42	0.038
regulation of cell growth	GO:0001558	29	0.037
regulation of transcription by pheromones	GO:0009373	14	0.036
double strand break repair	GO:0006302	105	0.036
membrane organization	GO:0061024	276	0.035
protein ubiquitination	GO:0016567	118	0.034
sporulation	GO:0043934	132	0.034
negative regulation of chromatin silencing	GO:0031936	25	0.033
cellular response to starvation	GO:0009267	90	0.033
cellular component disassembly	GO:0022411	86	0.033
carbon catabolite regulation of transcription	GO:0045990	39	0.032
carboxylic acid metabolic process	GO:0019752	338	0.031
positive regulation of gene expression epigenetic	GO:0045815	25	0.031
regulation of growth	GO:0040008	50	0.031
regulation of cellular amino acid metabolic process	GO:0006521	16	0.031
negative regulation of filamentous growth	GO:0060258	13	0.030
cellular nitrogen compound catabolic process	GO:0044270	494	0.030
positive regulation of response to stimulus	GO:0048584	37	0.030
cell development	GO:0048468	107	0.030
positive regulation of transcription from rna polymerase ii promoter in response to nitrosative stress	GO:0061403	2	0.030
regulation of cellular response to stress	GO:0080135	50	0.029
regulation of pseudohyphal growth	GO:2000220	18	0.029
reproduction of a single celled organism	GO:0032505	191	0.028
cell division	GO:0051301	205	0.028
invasive growth in response to glucose limitation	GO:0001403	61	0.028
ribonucleoside metabolic process	GO:0009119	389	0.027
signaling	GO:0023052	208	0.027
meiotic cell cycle process	GO:1903046	229	0.027
chromatin silencing at silent mating type cassette	GO:0030466	53	0.027
cellular protein complex disassembly	GO:0043624	42	0.026
response to nutrient levels	GO:0031667	150	0.026
cell cycle g1 s phase transition	GO:0044843	64	0.026
regulation of dna replication	GO:0006275	51	0.025
cellular cation homeostasis	GO:0030003	100	0.025
carbon catabolite regulation of transcription from rna polymerase ii promoter	GO:0000429	34	0.025
cell cycle checkpoint	GO:0000075	82	0.024
cell cycle g2 m phase transition	GO:0044839	39	0.024
purine nucleoside monophosphate catabolic process	GO:0009128	224	0.024
cellular amine metabolic process	GO:0044106	51	0.024
positive regulation of catabolic process	GO:0009896	135	0.024
dna replication initiation	GO:0006270	48	0.023
developmental process involved in reproduction	GO:0003006	159	0.023
negative regulation of cell cycle process	GO:0010948	86	0.023
growth	GO:0040007	157	0.023
conjugation with cellular fusion	GO:0000747	106	0.023
mating type switching	GO:0007533	28	0.023
glycosyl compound metabolic process	GO:1901657	398	0.022
protein catabolic process	GO:0030163	221	0.022
negative regulation of dna metabolic process	GO:0051053	36	0.022
mitotic cell cycle	GO:0000278	306	0.022
macromolecule catabolic process	GO:0009057	383	0.022
multi organism cellular process	GO:0044764	120	0.022
invasive filamentous growth	GO:0036267	65	0.022
regulation of protein metabolic process	GO:0051246	237	0.021
snorna processing	GO:0043144	34	0.021
nucleoside metabolic process	GO:0009116	394	0.021
response to starvation	GO:0042594	96	0.020
protein localization to organelle	GO:0033365	337	0.020
single organism catabolic process	GO:0044712	619	0.020
purine ribonucleoside monophosphate catabolic process	GO:0009169	224	0.020
negative regulation of gene silencing	GO:0060969	27	0.020
atp catabolic process	GO:0006200	224	0.019
histone methylation	GO:0016571	28	0.019
regulation of response to extracellular stimulus	GO:0032104	20	0.019
regulation of transcription from rna polymerase ii promoter by pheromones	GO:0046019	14	0.019
regulation of chromatin silencing at telomere	GO:0031938	27	0.018
cellular ketone metabolic process	GO:0042180	63	0.018
cellular homeostasis	GO:0019725	138	0.018
regulation of mitotic cell cycle phase transition	GO:1901990	68	0.018
nucleosome positioning	GO:0016584	10	0.018
organelle assembly	GO:0070925	118	0.018
regulation of catabolic process	GO:0009894	199	0.018
protein alkylation	GO:0008213	48	0.018
protein targeting	GO:0006605	272	0.018
regulation of fatty acid oxidation	GO:0046320	3	0.017
organophosphate metabolic process	GO:0019637	597	0.017
single organism signaling	GO:0044700	208	0.017
regulation of invasive growth in response to glucose limitation	GO:2000217	19	0.017
nucleoside monophosphate catabolic process	GO:0009125	224	0.017
regulation of cell cycle phase transition	GO:1901987	70	0.016
mitotic cell cycle phase transition	GO:0044772	141	0.016
regulation of histone acetylation	GO:0035065	7	0.016
ribonucleoside monophosphate catabolic process	GO:0009158	224	0.016
regulation of cellular amine metabolic process	GO:0033238	21	0.016
ascospore formation	GO:0030437	107	0.016
positive regulation of transcription from rna polymerase ii promoter in response to cold	GO:0061411	2	0.016
regulation of cellular protein metabolic process	GO:0032268	232	0.016
cellular carbohydrate catabolic process	GO:0044275	33	0.015
rrna processing	GO:0006364	227	0.015
negative regulation of organelle organization	GO:0010639	103	0.015
purine ribonucleoside triphosphate metabolic process	GO:0009205	354	0.015
regulation of cellular ketone metabolic process	GO:0010565	42	0.015
negative regulation of growth of unicellular organism as a thread of attached cells	GO:0070785	11	0.015
carbohydrate metabolic process	GO:0005975	252	0.015
single organism reproductive process	GO:0044702	159	0.015
negative regulation of cell cycle phase transition	GO:1901988	59	0.015
nucleoside monophosphate metabolic process	GO:0009123	267	0.015
establishment of rna localization	GO:0051236	92	0.015
positive regulation of fatty acid oxidation	GO:0046321	3	0.015
rna export from nucleus	GO:0006405	88	0.015
histone lysine methylation	GO:0034968	26	0.014
positive regulation of transcription from rna polymerase ii promoter in response to salt stress	GO:0036251	4	0.014
positive regulation of cellular amine metabolic process	GO:0033240	10	0.014
microtubule based process	GO:0007017	117	0.014
positive regulation of transcription from rna polymerase ii promoter in response to calcium ion	GO:0061400	1	0.014
heterochromatin organization involved in chromatin silencing	GO:0070868	8	0.013
protein deacylation	GO:0035601	27	0.013
signal transduction	GO:0007165	208	0.013
regulation of autophagy	GO:0010506	18	0.013
regulation of transcription from rna polymerase ii promoter in response to uv induced dna damage	GO:0010767	1	0.013
modification dependent protein catabolic process	GO:0019941	181	0.013
negative regulation of mitotic cell cycle phase transition	GO:1901991	57	0.013
mrna transport	GO:0051028	60	0.013
nucleoside phosphate metabolic process	GO:0006753	458	0.013
cellular protein catabolic process	GO:0044257	213	0.013
response to abiotic stimulus	GO:0009628	159	0.013
purine nucleoside metabolic process	GO:0042278	380	0.013
response to uv	GO:0009411	4	0.013
positive regulation of protein metabolic process	GO:0051247	93	0.013
anatomical structure formation involved in morphogenesis	GO:0048646	136	0.013
cation homeostasis	GO:0055080	105	0.013
primary alcohol catabolic process	GO:0034310	1	0.012
cellular response to salt stress	GO:0071472	19	0.012
cell morphogenesis	GO:0000902	30	0.012
purine ribonucleotide metabolic process	GO:0009150	372	0.012
regulation of metal ion transport	GO:0010959	2	0.012
positive regulation of protein modification process	GO:0031401	49	0.012
positive regulation of cellular protein metabolic process	GO:0032270	89	0.012
ribonucleoprotein complex assembly	GO:0022618	143	0.012
dna templated transcriptional preinitiation complex assembly	GO:0070897	51	0.012
regulation of replicative cell aging	GO:1900062	4	0.012
amine metabolic process	GO:0009308	51	0.012
dna strand elongation	GO:0022616	29	0.012
conjugation	GO:0000746	107	0.012
histone h3 k4 methylation	GO:0051568	18	0.012
nucleosome mobilization	GO:0042766	11	0.012
negative regulation of transcription from rna polymerase ii promoter by glucose	GO:0000433	10	0.012
regulation of localization	GO:0032879	127	0.011
negative regulation of cell division	GO:0051782	66	0.011
regulation of transcription from rna polymerase i promoter	GO:0006356	36	0.011
nucleobase containing small molecule metabolic process	GO:0055086	491	0.011
response to calcium ion	GO:0051592	1	0.011
nuclear rna surveillance	GO:0071027	30	0.011
regulation of chromatin silencing at silent mating type cassette	GO:0090054	13	0.011
cellular response to uv	GO:0034644	3	0.011
purine nucleotide catabolic process	GO:0006195	328	0.011
positive regulation of transcription from rna polymerase ii promoter in response to alkaline ph	GO:0061422	3	0.011
histone ubiquitination	GO:0016574	17	0.011
ribose phosphate metabolic process	GO:0019693	384	0.011
sex determination	GO:0007530	32	0.011
rna splicing	GO:0008380	131	0.010
cellular chemical homeostasis	GO:0055082	123	0.010
aromatic compound catabolic process	GO:0019439	491	0.010
modification dependent macromolecule catabolic process	GO:0043632	203	0.010
response to heat	GO:0009408	69	0.010

CHD1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

	Disease	DO term ID	Size	Probability	Func Analog Org

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