| phosphorylation | GO:0016310 | 291 | 0.196 | |
| oxidation reduction process | GO:0055114 | 353 | 0.151 | |
| protein phosphorylation | GO:0006468 | 197 | 0.112 | |
| aerobic respiration | GO:0009060 | 55 | 0.109 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 125 | 0.109 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.107 | |
| generation of precursor metabolites and energy | GO:0006091 | 147 | 0.086 | |
| regulation of biological quality | GO:0065008 | 391 | 0.083 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.075 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.073 | |
| establishment of protein localization | GO:0045184 | 367 | 0.071 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.070 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.065 | |
| membrane organization | GO:0061024 | 276 | 0.063 | |
| single organism cellular localization | GO:1902580 | 375 | 0.057 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.053 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.053 | |
| single organism catabolic process | GO:0044712 | 619 | 0.051 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.044 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.043 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.043 | |
| protein localization to organelle | GO:0033365 | 337 | 0.042 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.041 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.036 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.034 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.034 | |
| proteolysis | GO:0006508 | 268 | 0.033 | |
| response to chemical | GO:0042221 | 390 | 0.033 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.032 | |
| single organism membrane organization | GO:0044802 | 275 | 0.032 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.030 | |
| intracellular protein transport | GO:0006886 | 319 | 0.030 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.028 | |
| regulation of protein modification process | GO:0031399 | 110 | 0.028 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.027 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.026 | |
| protein complex assembly | GO:0006461 | 302 | 0.026 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.025 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.024 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.024 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.024 | |
| atp metabolic process | GO:0046034 | 251 | 0.023 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.021 | |
| protein catabolic process | GO:0030163 | 221 | 0.021 | |
| protein transport | GO:0015031 | 345 | 0.021 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.021 | |
| reproductive process | GO:0022414 | 248 | 0.021 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.020 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.020 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.020 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.020 | |
| regulation of molecular function | GO:0065009 | 320 | 0.020 | |
| protein targeting | GO:0006605 | 272 | 0.019 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.018 | |
| cellular carbohydrate metabolic process | GO:0044262 | 135 | 0.018 | |
| cellular respiration | GO:0045333 | 82 | 0.017 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 262 | 0.017 | |
| regulation of transferase activity | GO:0051338 | 83 | 0.017 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.017 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.017 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.017 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.016 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.016 | |
| serine family amino acid metabolic process | GO:0009069 | 25 | 0.016 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.015 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.015 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.015 | |
| single organism developmental process | GO:0044767 | 258 | 0.015 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.015 | |
| regulation of protein phosphorylation | GO:0001932 | 75 | 0.014 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.014 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.014 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.014 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.014 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.013 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.013 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.013 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.013 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.013 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 49 | 0.013 | |
| multi organism process | GO:0051704 | 233 | 0.012 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.012 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.012 | |
| mitochondrial respiratory chain complex assembly | GO:0033108 | 36 | 0.012 | |
| protein localization to membrane | GO:0072657 | 102 | 0.012 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.012 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 42 | 0.012 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.012 | |
| regulation of nucleotide metabolic process | GO:0006140 | 110 | 0.011 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.011 | |
| developmental process | GO:0032502 | 261 | 0.011 | |
| single organism signaling | GO:0044700 | 208 | 0.011 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.011 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 106 | 0.011 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.011 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.010 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.010 | |
| cellular developmental process | GO:0048869 | 191 | 0.010 | |
