| transcription initiation from rna polymerase ii promoter | GO:0006367 | 55 | 0.977 | |
| dna templated transcription initiation | GO:0006352 | 71 | 0.972 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 40 | 0.870 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 81 | 0.746 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 51 | 0.671 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.637 | |
| dna templated transcription elongation | GO:0006354 | 91 | 0.478 | |
| regulation of transcription elongation from rna polymerase ii promoter | GO:0034243 | 40 | 0.398 | |
| transcriptional start site selection at rna polymerase ii promoter | GO:0001174 | 7 | 0.391 | |
| protein dephosphorylation | GO:0006470 | 40 | 0.328 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 38 | 0.279 | |
| mrna metabolic process | GO:0016071 | 269 | 0.264 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.231 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.224 | |
| mrna export from nucleus | GO:0006406 | 60 | 0.173 | |
| dephosphorylation | GO:0016311 | 127 | 0.170 | |
| dna templated transcriptional start site selection | GO:0001173 | 7 | 0.164 | |
| regulation of molecular function | GO:0065009 | 320 | 0.162 | |
| positive regulation of transcription initiation from rna polymerase ii promoter | GO:0060261 | 13 | 0.137 | |
| protein dna complex subunit organization | GO:0071824 | 153 | 0.125 | |
| positive regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045899 | 11 | 0.124 | |
| regulation of transcription initiation from rna polymerase ii promoter | GO:0060260 | 19 | 0.120 | |
| rna catabolic process | GO:0006401 | 118 | 0.106 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.099 | |
| protein localization to organelle | GO:0033365 | 337 | 0.089 | |
| nucleocytoplasmic transport | GO:0006913 | 163 | 0.088 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.085 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.085 | |
| dna repair | GO:0006281 | 236 | 0.082 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.082 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.080 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.075 | |
| regulation of dephosphorylation | GO:0035303 | 18 | 0.074 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.072 | |
| macromolecular complex disassembly | GO:0032984 | 80 | 0.071 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.067 | |
| positive regulation of protein complex assembly | GO:0031334 | 39 | 0.062 | |
| invasive growth in response to glucose limitation | GO:0001403 | 61 | 0.060 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.057 | |
| mrna 3 end processing | GO:0031124 | 54 | 0.057 | |
| nuclear transcribed mrna catabolic process deadenylation dependent decay | GO:0000288 | 44 | 0.055 | |
| protein dna complex assembly | GO:0065004 | 105 | 0.055 | |
| translation | GO:0006412 | 230 | 0.054 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.052 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.052 | |
| dna recombination | GO:0006310 | 172 | 0.051 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.051 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.048 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.047 | |
| mrna processing | GO:0006397 | 185 | 0.046 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.045 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.044 | |
| transposition | GO:0032196 | 20 | 0.044 | |
| macromolecule methylation | GO:0043414 | 85 | 0.043 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.042 | |
| nuclear export | GO:0051168 | 124 | 0.042 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.042 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.042 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.042 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.041 | |
| rrna metabolic process | GO:0016072 | 244 | 0.041 | |
| rna 3 end processing | GO:0031123 | 88 | 0.041 | |
| chromosome segregation | GO:0007059 | 159 | 0.040 | |
| protein ubiquitination | GO:0016567 | 118 | 0.039 | |
| nuclear transport | GO:0051169 | 165 | 0.039 | |
| rna transport | GO:0050658 | 92 | 0.039 | |
| nuclear transcribed mrna catabolic process exonucleolytic | GO:0000291 | 12 | 0.039 | |
| phosphorylation of rna polymerase ii c terminal domain | GO:0070816 | 20 | 0.039 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.038 | |
| internal protein amino acid acetylation | GO:0006475 | 52 | 0.036 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.035 | |
| reciprocal meiotic recombination | GO:0007131 | 54 | 0.035 | |
| transcription elongation from rna polymerase i promoter | GO:0006362 | 10 | 0.034 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.034 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.033 | |
| regulation of translation | GO:0006417 | 89 | 0.033 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.033 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.033 | |
| protein transport | GO:0015031 | 345 | 0.033 | |
| postreplication repair | GO:0006301 | 24 | 0.032 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 57 | 0.032 | |
| ncrna processing | GO:0034470 | 330 | 0.032 | |
| regulation of proteolysis | GO:0030162 | 44 | 0.032 | |
| mrna transport | GO:0051028 | 60 | 0.031 | |
| translational initiation | GO:0006413 | 56 | 0.031 | |
| dna templated transcription termination | GO:0006353 | 42 | 0.031 | |
| positive regulation of invasive growth in response to glucose limitation | GO:2000219 | 11 | 0.030 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.030 | |
| invasive filamentous growth | GO:0036267 | 65 | 0.029 | |
| positive regulation of transcription elongation from rna polymerase i promoter | GO:2001209 | 7 | 0.029 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.028 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.028 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.027 | |
| covalent chromatin modification | GO:0016569 | 119 | 0.027 | |
| regulation of dna templated transcription initiation | GO:2000142 | 19 | 0.027 | |
| er to golgi vesicle mediated transport | GO:0006888 | 86 | 0.027 | |
| regulation of gene silencing | GO:0060968 | 41 | 0.027 | |
| regulation of dna templated transcription elongation | GO:0032784 | 44 | 0.026 | |
| growth of unicellular organism as a thread of attached cells | GO:0070783 | 105 | 0.026 | |
| cellular response to heat | GO:0034605 | 53 | 0.026 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.025 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 224 | 0.025 | |
| nucleobase containing compound transport | GO:0015931 | 124 | 0.025 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.025 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 89 | 0.025 | |
| rna export from nucleus | GO:0006405 | 88 | 0.025 | |
| histone methylation | GO:0016571 | 28 | 0.025 | |
| regulation of growth of unicellular organism as a thread of attached cells | GO:0070784 | 31 | 0.024 | |
| multi organism process | GO:0051704 | 233 | 0.024 | |
| regulation of protein complex assembly | GO:0043254 | 77 | 0.024 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.024 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.024 | |
| microtubule cytoskeleton organization | GO:0000226 | 109 | 0.024 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 262 | 0.024 | |
| reciprocal dna recombination | GO:0035825 | 54 | 0.024 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.024 | |
| mitotic cell cycle checkpoint | GO:0007093 | 56 | 0.023 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.023 | |
| membrane fusion | GO:0061025 | 73 | 0.023 | |
| protein complex disassembly | GO:0043241 | 70 | 0.023 | |
| chromatin organization | GO:0006325 | 242 | 0.022 | |
| protein localization to nucleus | GO:0034504 | 74 | 0.022 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 59 | 0.022 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 42 | 0.022 | |
| protein complex assembly | GO:0006461 | 302 | 0.022 | |
| detection of stimulus | GO:0051606 | 4 | 0.022 | |
| regulation of rna polymerase ii transcriptional preinitiation complex assembly | GO:0045898 | 13 | 0.021 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.021 | |
| regulation of translational initiation | GO:0006446 | 18 | 0.021 | |
| nucleotide excision repair | GO:0006289 | 50 | 0.021 | |
| nucleosome mobilization | GO:0042766 | 11 | 0.021 | |
| sterol transport | GO:0015918 | 24 | 0.021 | |
| filamentous growth | GO:0030447 | 124 | 0.021 | |
| peptidyl amino acid modification | GO:0018193 | 116 | 0.021 | |
| cytoskeleton dependent intracellular transport | GO:0030705 | 18 | 0.021 | |
| chromatin remodeling | GO:0006338 | 80 | 0.021 | |
| regulation of dna templated transcription in response to stress | GO:0043620 | 51 | 0.021 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.021 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.021 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.021 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.021 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.020 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.020 | |
| mrna catabolic process | GO:0006402 | 93 | 0.020 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.020 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.020 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.020 | |
| protein processing | GO:0016485 | 64 | 0.020 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.020 | |
| protein acylation | GO:0043543 | 66 | 0.020 | |
| protein localization to chromosome | GO:0034502 | 28 | 0.020 | |
| protein methylation | GO:0006479 | 48 | 0.020 | |
| regulation of chromosome organization | GO:0033044 | 66 | 0.019 | |
| protein complex localization | GO:0031503 | 32 | 0.019 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.019 | |
| fungal type cell wall assembly | GO:0071940 | 53 | 0.019 | |
| establishment of rna localization | GO:0051236 | 92 | 0.019 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.019 | |
| negative regulation of cell cycle | GO:0045786 | 91 | 0.019 | |
| cellular component disassembly | GO:0022411 | 86 | 0.019 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.019 | |
| regulation of biological quality | GO:0065008 | 391 | 0.019 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.018 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 45 | 0.018 | |
| localization within membrane | GO:0051668 | 29 | 0.018 | |
| endosomal transport | GO:0016197 | 86 | 0.018 | |
| termination of rna polymerase ii transcription | GO:0006369 | 26 | 0.018 | |
| positive regulation of translation | GO:0045727 | 34 | 0.018 | |
| amine metabolic process | GO:0009308 | 51 | 0.018 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.018 | |
| poly a mrna export from nucleus | GO:0016973 | 24 | 0.018 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.018 | |
| lipid transport | GO:0006869 | 58 | 0.018 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.018 | |
| dna templated transcriptional open complex formation | GO:0001112 | 7 | 0.017 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.017 | |
| regulation of cell cycle phase transition | GO:1901987 | 70 | 0.017 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 89 | 0.017 | |
| response to chemical | GO:0042221 | 390 | 0.017 | |
| positive regulation of transcription from rna polymerase ii promoter in response to stress | GO:0036003 | 33 | 0.017 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.017 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.017 | |
| establishment of protein localization to peroxisome | GO:0072663 | 22 | 0.017 | |
| transposition rna mediated | GO:0032197 | 17 | 0.016 | |
| rrna processing | GO:0006364 | 227 | 0.016 | |
| protein maturation | GO:0051604 | 76 | 0.016 | |
| cellular protein complex localization | GO:0034629 | 28 | 0.016 | |
| histone modification | GO:0016570 | 119 | 0.016 | |
| cortical actin cytoskeleton organization | GO:0030866 | 11 | 0.016 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.016 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 267 | 0.016 | |
| homeostatic process | GO:0042592 | 227 | 0.016 | |
| single organism developmental process | GO:0044767 | 258 | 0.016 | |
| positive regulation of sequence specific dna binding transcription factor activity | GO:0051091 | 2 | 0.015 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.015 | |
| protein acetylation | GO:0006473 | 59 | 0.015 | |
| protein polymerization | GO:0051258 | 51 | 0.015 | |
| purine nucleoside biosynthetic process | GO:0042451 | 31 | 0.015 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.015 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.015 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.015 | |
| single organism cellular localization | GO:1902580 | 375 | 0.015 | |
| regulation of cellular protein catabolic process | GO:1903362 | 36 | 0.015 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.015 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 262 | 0.014 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 224 | 0.014 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.014 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.014 | |
| regulation of chromatin silencing at telomere | GO:0031938 | 27 | 0.014 | |
| intracellular protein transmembrane import | GO:0044743 | 67 | 0.014 | |
| lipid localization | GO:0010876 | 60 | 0.014 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 224 | 0.014 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.014 | |
| internal peptidyl lysine acetylation | GO:0018393 | 52 | 0.014 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 147 | 0.014 | |
| regulation of cellular component biogenesis | GO:0044087 | 112 | 0.014 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.014 | |
| regulation of protein maturation | GO:1903317 | 34 | 0.014 | |
| regulation of phosphatase activity | GO:0010921 | 8 | 0.014 | |
| atp catabolic process | GO:0006200 | 224 | 0.014 | |
| regulation of transcription coupled nucleotide excision repair | GO:0090262 | 7 | 0.014 | |
| regulation of cell cycle process | GO:0010564 | 150 | 0.013 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.013 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.013 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.013 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.013 | |
| protein ubiquitination involved in ubiquitin dependent protein catabolic process | GO:0042787 | 26 | 0.013 | |
| gene silencing | GO:0016458 | 151 | 0.013 | |
| nucleic acid transport | GO:0050657 | 94 | 0.013 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 224 | 0.013 | |
| atp metabolic process | GO:0046034 | 251 | 0.013 | |
| cellular carbohydrate catabolic process | GO:0044275 | 33 | 0.013 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.012 | |
| transcription from rna polymerase iii promoter | GO:0006383 | 40 | 0.012 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.012 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.012 | |
| response to temperature stimulus | GO:0009266 | 74 | 0.012 | |
| single organism membrane organization | GO:0044802 | 275 | 0.012 | |
| chromatin silencing at rdna | GO:0000183 | 32 | 0.012 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.012 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.012 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 42 | 0.012 | |
| positive regulation of intracellular transport | GO:0032388 | 4 | 0.012 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.012 | |
| small molecule catabolic process | GO:0044282 | 88 | 0.012 | |
| single organism membrane fusion | GO:0044801 | 71 | 0.011 | |
| dna dependent dna replication | GO:0006261 | 115 | 0.011 | |
| histone acetylation | GO:0016573 | 51 | 0.011 | |
| regulation of chromatin silencing | GO:0031935 | 39 | 0.011 | |
| filamentous growth of a population of unicellular organisms | GO:0044182 | 109 | 0.011 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.011 | |
| peroxisomal transport | GO:0043574 | 22 | 0.011 | |
| organic hydroxy compound transport | GO:0015850 | 41 | 0.011 | |
| endocytosis | GO:0006897 | 90 | 0.011 | |
| vacuole organization | GO:0007033 | 75 | 0.011 | |
| establishment of ribosome localization | GO:0033753 | 46 | 0.011 | |
| proteolysis | GO:0006508 | 268 | 0.011 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.011 | |
| ascospore wall biogenesis | GO:0070591 | 52 | 0.011 | |
| regulation of transcription from rna polymerase ii promoter in response to stress | GO:0043618 | 51 | 0.011 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.011 | |
| negative regulation of protein processing | GO:0010955 | 33 | 0.010 | |
| cell wall organization or biogenesis | GO:0071554 | 190 | 0.010 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 147 | 0.010 | |
| rna splicing | GO:0008380 | 131 | 0.010 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.010 | |
| mitotic sister chromatid segregation | GO:0000070 | 85 | 0.010 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.010 | |
| positive regulation of protein metabolic process | GO:0051247 | 93 | 0.010 | |
| protein catabolic process | GO:0030163 | 221 | 0.010 | |
| positive regulation of protein polymerization | GO:0032273 | 22 | 0.010 | |