| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.115 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.104 | |
| cytochrome complex assembly | GO:0017004 | 29 | 0.104 | |
| mitochondrial respiratory chain complex iv biogenesis | GO:0097034 | 26 | 0.092 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.089 | |
| mitochondrion organization | GO:0007005 | 261 | 0.052 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.050 | |
| regulation of biological quality | GO:0065008 | 391 | 0.049 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.044 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.044 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.043 | |
| protein complex assembly | GO:0006461 | 302 | 0.043 | |
| aerobic respiration | GO:0009060 | 55 | 0.042 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.039 | |
| generation of precursor metabolites and energy | GO:0006091 | 147 | 0.038 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.038 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.038 | |
| single organism membrane organization | GO:0044802 | 275 | 0.038 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.037 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.036 | |
| dephosphorylation | GO:0016311 | 127 | 0.036 | |
| mitochondrial respiratory chain complex assembly | GO:0033108 | 36 | 0.035 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.034 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.034 | |
| respiratory chain complex iv assembly | GO:0008535 | 18 | 0.034 | |
| membrane organization | GO:0061024 | 276 | 0.034 | |
| chromatin silencing at telomere | GO:0006348 | 84 | 0.033 | |
| oxidation reduction process | GO:0055114 | 353 | 0.033 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.033 | |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.031 | |
| response to chemical | GO:0042221 | 390 | 0.030 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.030 | |
| single organism catabolic process | GO:0044712 | 619 | 0.029 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.029 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 260 | 0.029 | |
| mitochondrial respiratory chain complex iv assembly | GO:0033617 | 18 | 0.029 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.029 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.028 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.028 | |
| chromatin organization | GO:0006325 | 242 | 0.027 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.026 | |
| filamentous growth of a population of unicellular organisms | GO:0044182 | 109 | 0.026 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.025 | |
| cell division | GO:0051301 | 205 | 0.025 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.025 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.025 | |
| regulation of translation | GO:0006417 | 89 | 0.025 | |
| regulation of cell cycle process | GO:0010564 | 150 | 0.024 | |
| pseudouridine synthesis | GO:0001522 | 13 | 0.023 | |
| regulation of dna replication | GO:0006275 | 51 | 0.023 | |
| chemical homeostasis | GO:0048878 | 137 | 0.023 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 125 | 0.023 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.023 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.023 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.022 | |
| phosphorylation | GO:0016310 | 291 | 0.022 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.022 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.022 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.022 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.021 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.021 | |
| dna replication | GO:0006260 | 147 | 0.020 | |
| filamentous growth | GO:0030447 | 124 | 0.020 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.020 | |
| rna transport | GO:0050658 | 92 | 0.020 | |
| ncrna processing | GO:0034470 | 330 | 0.019 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.019 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.019 | |
| proteolysis | GO:0006508 | 268 | 0.019 | |
| rna localization | GO:0006403 | 112 | 0.019 | |
| cellular metal ion homeostasis | GO:0006875 | 78 | 0.019 | |
| nucleic acid transport | GO:0050657 | 94 | 0.019 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.019 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.019 | |
| growth of unicellular organism as a thread of attached cells | GO:0070783 | 105 | 0.018 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.018 | |
| cellular transition metal ion homeostasis | GO:0046916 | 59 | 0.018 | |
| positive regulation of translation | GO:0045727 | 34 | 0.018 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.018 | |
| reproductive process in single celled organism | GO:0022413 | 145 | 0.018 | |
| regulation of nuclear division | GO:0051783 | 103 | 0.018 | |
| mrna metabolic process | GO:0016071 | 269 | 0.018 | |
| rna splicing | GO:0008380 | 131 | 0.018 | |
| cellular respiration | GO:0045333 | 82 | 0.018 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.017 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.017 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.017 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.017 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.017 | |
| pseudohyphal growth | GO:0007124 | 75 | 0.017 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.017 | |
| regulation of transcription from rna polymerase ii promoter in response to stress | GO:0043618 | 51 | 0.017 | |
| chromatin modification | GO:0016568 | 200 | 0.017 | |
| regulation of molecular function | GO:0065009 | 320 | 0.017 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.017 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.017 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.016 | |
| cation homeostasis | GO:0055080 | 105 | 0.016 | |
| regulation of dna metabolic process | GO:0051052 | 100 | 0.016 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.016 | |
| homeostatic process | GO:0042592 | 227 | 0.016 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.016 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.016 | |
| developmental process | GO:0032502 | 261 | 0.016 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.015 | |
| establishment of protein localization | GO:0045184 | 367 | 0.015 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.015 | |
| regulation of localization | GO:0032879 | 127 | 0.015 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.015 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.015 | |
| carboxylic acid transport | GO:0046942 | 74 | 0.015 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.015 | |
| regulation of dna templated transcription in response to stress | GO:0043620 | 51 | 0.015 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.014 | |
| trna processing | GO:0008033 | 101 | 0.014 | |
| organelle fission | GO:0048285 | 272 | 0.014 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 89 | 0.014 | |
| cellular component morphogenesis | GO:0032989 | 97 | 0.014 | |
| cellular ion homeostasis | GO:0006873 | 112 | 0.014 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.014 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 147 | 0.014 | |
| detection of chemical stimulus | GO:0009593 | 3 | 0.014 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.014 | |
| gene silencing | GO:0016458 | 151 | 0.014 | |
| organic anion transport | GO:0015711 | 114 | 0.014 | |
| protein phosphorylation | GO:0006468 | 197 | 0.014 | |
| rrna processing | GO:0006364 | 227 | 0.014 | |
| organic acid transport | GO:0015849 | 77 | 0.014 | |
| transition metal ion transport | GO:0000041 | 45 | 0.014 | |
| positive regulation of mitochondrion organization | GO:0010822 | 16 | 0.014 | |
| chromatin silencing | GO:0006342 | 147 | 0.014 | |
| cell growth | GO:0016049 | 89 | 0.014 | |
| ion homeostasis | GO:0050801 | 118 | 0.014 | |
| mitochondrial respiratory chain complex iii biogenesis | GO:0097033 | 11 | 0.013 | |
| cation transport | GO:0006812 | 166 | 0.013 | |
| negative regulation of nuclear division | GO:0051784 | 62 | 0.013 | |
| macromolecule methylation | GO:0043414 | 85 | 0.013 | |
| invasive growth in response to glucose limitation | GO:0001403 | 61 | 0.013 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.013 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.013 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.013 | |
| reproductive process | GO:0022414 | 248 | 0.013 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.013 | |
| detection of stimulus | GO:0051606 | 4 | 0.013 | |
| positive regulation of organelle organization | GO:0010638 | 85 | 0.013 | |
| rrna metabolic process | GO:0016072 | 244 | 0.013 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.012 | |
| cellular protein complex disassembly | GO:0043624 | 42 | 0.012 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 147 | 0.012 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.012 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.012 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.012 | |
| negative regulation of cellular component organization | GO:0051129 | 109 | 0.012 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.012 | |
| organelle fusion | GO:0048284 | 85 | 0.012 | |
| invasive filamentous growth | GO:0036267 | 65 | 0.012 | |
| sexual sporulation resulting in formation of a cellular spore | GO:0043935 | 113 | 0.011 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.011 | |
| sporulation resulting in formation of a cellular spore | GO:0030435 | 129 | 0.011 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.011 | |
| single organism reproductive process | GO:0044702 | 159 | 0.011 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.011 | |
| establishment of rna localization | GO:0051236 | 92 | 0.011 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.011 | |
| rrna modification | GO:0000154 | 19 | 0.011 | |
| nucleocytoplasmic transport | GO:0006913 | 163 | 0.011 | |
| nuclear transport | GO:0051169 | 165 | 0.011 | |
| ascospore formation | GO:0030437 | 107 | 0.011 | |
| ion transport | GO:0006811 | 274 | 0.011 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.011 | |
| cellular developmental process | GO:0048869 | 191 | 0.011 | |
| growth | GO:0040007 | 157 | 0.011 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.011 | |
| positive regulation of programmed cell death | GO:0043068 | 3 | 0.011 | |
| cellular component disassembly | GO:0022411 | 86 | 0.011 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.011 | |
| autophagy | GO:0006914 | 106 | 0.011 | |
| mitochondrial genome maintenance | GO:0000002 | 40 | 0.011 | |
| cellular chemical homeostasis | GO:0055082 | 123 | 0.011 | |
| cellular homeostasis | GO:0019725 | 138 | 0.010 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.010 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.010 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 42 | 0.010 | |
| positive regulation of protein metabolic process | GO:0051247 | 93 | 0.010 | |
| dna conformation change | GO:0071103 | 98 | 0.010 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.010 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 147 | 0.010 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.010 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.010 | |
| protein acylation | GO:0043543 | 66 | 0.010 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 137 | 0.010 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.010 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.010 | |
| methylation | GO:0032259 | 101 | 0.010 | |
