| dna templated transcription elongation | GO:0006354 | 91 | 0.989 | |
| chromatin organization | GO:0006325 | 242 | 0.977 | |
| chromatin assembly or disassembly | GO:0006333 | 60 | 0.967 | |
| chromatin modification | GO:0016568 | 200 | 0.955 | Yeast |
| protein dna complex disassembly | GO:0032986 | 20 | 0.955 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 81 | 0.877 | |
| non recombinational repair | GO:0000726 | 33 | 0.845 | |
| nucleosome organization | GO:0034728 | 63 | 0.840 | |
| double strand break repair | GO:0006302 | 105 | 0.815 | |
| protein dna complex subunit organization | GO:0071824 | 153 | 0.775 | |
| nucleosome disassembly | GO:0006337 | 19 | 0.638 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.560 | |
| dna repair | GO:0006281 | 236 | 0.535 | |
| atp dependent chromatin remodeling | GO:0043044 | 36 | 0.509 | Yeast |
| chromatin disassembly | GO:0031498 | 19 | 0.469 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.431 | |
| histone modification | GO:0016570 | 119 | 0.401 | Yeast |
| macromolecular complex disassembly | GO:0032984 | 80 | 0.368 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.342 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.297 | |
| cellular carbohydrate metabolic process | GO:0044262 | 135 | 0.291 | |
| covalent chromatin modification | GO:0016569 | 119 | 0.286 | Yeast |
| cellular component disassembly | GO:0022411 | 86 | 0.270 | |
| peptidyl amino acid modification | GO:0018193 | 116 | 0.258 | Yeast |
| chromatin remodeling | GO:0006338 | 80 | 0.232 | Yeast |
| dna recombination | GO:0006310 | 172 | 0.206 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.206 | |
| protein complex disassembly | GO:0043241 | 70 | 0.191 | |
| nuclear division | GO:0000280 | 263 | 0.182 | |
| chromosome segregation | GO:0007059 | 159 | 0.182 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 38 | 0.177 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.168 | |
| organelle fission | GO:0048285 | 272 | 0.167 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.164 | Yeast |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.153 | |
| peptidyl lysine acetylation | GO:0018394 | 52 | 0.138 | Yeast |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.131 | |
| reproductive process in single celled organism | GO:0022413 | 145 | 0.128 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.126 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 137 | 0.120 | |
| histone acetylation | GO:0016573 | 51 | 0.120 | Yeast |
| negative regulation of mitotic cell cycle | GO:0045930 | 63 | 0.117 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.113 | |
| regulation of nuclear division | GO:0051783 | 103 | 0.110 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.108 | |
| recombinational repair | GO:0000725 | 64 | 0.106 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.105 | |
| internal peptidyl lysine acetylation | GO:0018393 | 52 | 0.104 | Yeast |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.104 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.101 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.100 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.098 | Yeast |
| regulation of cell cycle phase transition | GO:1901987 | 70 | 0.094 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.092 | |
| multi organism process | GO:0051704 | 233 | 0.091 | Yeast |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 68 | 0.091 | |
| regulation of cell cycle process | GO:0010564 | 150 | 0.089 | |
| regulation of biological quality | GO:0065008 | 391 | 0.085 | |
| translation | GO:0006412 | 230 | 0.077 | |
| developmental process | GO:0032502 | 261 | 0.076 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.075 | |
| regulation of dna templated transcription elongation | GO:0032784 | 44 | 0.074 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.070 | |
| response to chemical | GO:0042221 | 390 | 0.069 | |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.069 | Yeast |
| peptidyl lysine modification | GO:0018205 | 77 | 0.068 | Yeast |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.067 | |
| regulation of transcription elongation from rna polymerase ii promoter | GO:0034243 | 40 | 0.065 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.065 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 57 | 0.064 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.062 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 64 | 0.061 | |
| double strand break repair via nonhomologous end joining | GO:0006303 | 27 | 0.056 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.055 | |
| cellular response to starvation | GO:0009267 | 90 | 0.055 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 59 | 0.054 | |
| single organism reproductive process | GO:0044702 | 159 | 0.054 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.053 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.052 | Yeast |
| cell cycle phase transition | GO:0044770 | 144 | 0.052 | |
| regulation of mitotic cell cycle | GO:0007346 | 107 | 0.052 | |
| negative regulation of cell communication | GO:0010648 | 33 | 0.051 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.050 | Yeast |
| mitotic cell cycle | GO:0000278 | 306 | 0.050 | |
| cell cycle g1 s phase transition | GO:0044843 | 64 | 0.050 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.049 | Yeast |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.049 | |
| cellular ketone metabolic process | GO:0042180 | 63 | 0.048 | |
| signal transduction | GO:0007165 | 208 | 0.048 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.047 | |
| protein phosphorylation | GO:0006468 | 197 | 0.047 | |
| double strand break repair via homologous recombination | GO:0000724 | 54 | 0.046 | |
| single organism catabolic process | GO:0044712 | 619 | 0.044 | |
| internal protein amino acid acetylation | GO:0006475 | 52 | 0.043 | Yeast |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.043 | |
| response to external stimulus | GO:0009605 | 158 | 0.043 | |
| regulation of meiotic cell cycle | GO:0051445 | 43 | 0.043 | |
| phosphorylation | GO:0016310 | 291 | 0.042 | |
| negative regulation of cell cycle process | GO:0010948 | 86 | 0.042 | |
| cell differentiation | GO:0030154 | 161 | 0.042 | |
| negative regulation of signal transduction | GO:0009968 | 30 | 0.041 | |
| negative regulation of response to stimulus | GO:0048585 | 40 | 0.041 | |
| sporulation | GO:0043934 | 132 | 0.040 | |
| cell division | GO:0051301 | 205 | 0.038 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 147 | 0.038 | |
| ascospore formation | GO:0030437 | 107 | 0.037 | |
| lipid metabolic process | GO:0006629 | 269 | 0.037 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 194 | 0.037 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.037 | |
| cell growth | GO:0016049 | 89 | 0.036 | |
| reproductive process | GO:0022414 | 248 | 0.036 | Yeast |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.036 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.035 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.035 | |
| filamentous growth | GO:0030447 | 124 | 0.035 | |
| alcohol metabolic process | GO:0006066 | 112 | 0.033 | |
| oxidation reduction process | GO:0055114 | 353 | 0.033 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.032 | |
| regulation of transcription from rna polymerase ii promoter in response to stress | GO:0043618 | 51 | 0.032 | |
| regulation of translation | GO:0006417 | 89 | 0.032 | |
| regulation of dna metabolic process | GO:0051052 | 100 | 0.031 | Yeast |
| macromolecule catabolic process | GO:0009057 | 383 | 0.031 | |
| protein acylation | GO:0043543 | 66 | 0.031 | Yeast |
| cell communication | GO:0007154 | 345 | 0.030 | |
| response to nutrient levels | GO:0031667 | 150 | 0.029 | |
| cellular response to abiotic stimulus | GO:0071214 | 62 | 0.028 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.028 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.028 | Yeast |
| response to organic substance | GO:0010033 | 182 | 0.027 | |
| sexual reproduction | GO:0019953 | 216 | 0.027 | Yeast |
| cell fate commitment | GO:0045165 | 32 | 0.027 | |
| protein targeting to nucleus | GO:0044744 | 57 | 0.026 | |
| single organism developmental process | GO:0044767 | 258 | 0.026 | |
| small molecule catabolic process | GO:0044282 | 88 | 0.025 | |
| dna dependent dna replication | GO:0006261 | 115 | 0.025 | |
| amine metabolic process | GO:0009308 | 51 | 0.025 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.025 | |
| proteolysis | GO:0006508 | 268 | 0.024 | |
| growth of unicellular organism as a thread of attached cells | GO:0070783 | 105 | 0.024 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.024 | |
| mitotic cell cycle phase transition | GO:0044772 | 141 | 0.024 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.024 | |
| cellular carbohydrate biosynthetic process | GO:0034637 | 49 | 0.023 | |
| regulation of cellular amine metabolic process | GO:0033238 | 21 | 0.023 | |
| mitotic cell cycle checkpoint | GO:0007093 | 56 | 0.023 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 42 | 0.022 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.022 | Yeast |
| positive regulation of molecular function | GO:0044093 | 185 | 0.022 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.022 | Yeast |
| positive regulation of protein modification process | GO:0031401 | 49 | 0.022 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.022 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.022 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.021 | Yeast |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.021 | Yeast |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.021 | |
| protein acetylation | GO:0006473 | 59 | 0.020 | Yeast |
| positive regulation of cellular protein metabolic process | GO:0032270 | 89 | 0.020 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.020 | |
| positive regulation of protein metabolic process | GO:0051247 | 93 | 0.020 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.020 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.020 | |
| positive regulation of transcription from rna polymerase ii promoter in response to stress | GO:0036003 | 33 | 0.020 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.019 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.019 | |
| homeostatic process | GO:0042592 | 227 | 0.019 | |
| regulation of dna templated transcription in response to stress | GO:0043620 | 51 | 0.019 | |
| dna packaging | GO:0006323 | 55 | 0.019 | Yeast |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.018 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.018 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.018 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.018 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.018 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 16 | 0.018 | |
| sporulation resulting in formation of a cellular spore | GO:0030435 | 129 | 0.017 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.017 | |
| sexual sporulation resulting in formation of a cellular spore | GO:0043935 | 113 | 0.017 | |
| response to heat | GO:0009408 | 69 | 0.017 | |
| cell wall biogenesis | GO:0042546 | 93 | 0.017 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.017 | Yeast |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.017 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.017 | |
| g2 m transition of mitotic cell cycle | GO:0000086 | 38 | 0.017 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.016 | Yeast |
| positive regulation of organelle organization | GO:0010638 | 85 | 0.016 | Yeast |
| dna conformation change | GO:0071103 | 98 | 0.016 | Yeast |
| cytokinesis | GO:0000910 | 92 | 0.016 | |
| positive regulation of dna templated transcription elongation | GO:0032786 | 42 | 0.016 | |
| regulation of signaling | GO:0023051 | 119 | 0.016 | |
| mrna metabolic process | GO:0016071 | 269 | 0.015 | |
| cell wall organization or biogenesis | GO:0071554 | 190 | 0.015 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 147 | 0.015 | |
| negative regulation of signaling | GO:0023057 | 30 | 0.015 | |
| polyol metabolic process | GO:0019751 | 22 | 0.014 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.014 | |
| regulation of intracellular signal transduction | GO:1902531 | 78 | 0.014 | |
| sex determination | GO:0007530 | 32 | 0.014 | |
| response to temperature stimulus | GO:0009266 | 74 | 0.014 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.013 | Yeast |
| response to oxygen containing compound | GO:1901700 | 61 | 0.013 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.013 | |
| regulation of filamentous growth | GO:0010570 | 38 | 0.013 | |
| nucleosome positioning | GO:0016584 | 10 | 0.013 | |
| regulation of cellular ketone metabolic process by positive regulation of transcription from rna polymerase ii promoter | GO:0072366 | 10 | 0.013 | |
| cellular response to oxidative stress | GO:0034599 | 94 | 0.013 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.013 | |
| single organism signaling | GO:0044700 | 208 | 0.013 | |
| response to inorganic substance | GO:0010035 | 47 | 0.013 | |
| peroxisome organization | GO:0007031 | 68 | 0.012 | |
| negative regulation of cell division | GO:0051782 | 66 | 0.012 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.012 | |
| conjugation | GO:0000746 | 107 | 0.012 | Yeast |
| regulation of molecular function | GO:0065009 | 320 | 0.012 | |
| cellular alcohol metabolic process | GO:0044107 | 34 | 0.012 | |
| regulation of anatomical structure size | GO:0090066 | 50 | 0.012 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.012 | |
| cell cycle g2 m phase transition | GO:0044839 | 39 | 0.011 | |
| growth | GO:0040007 | 157 | 0.011 | |
| regulation of chromosome organization | GO:0033044 | 66 | 0.011 | Yeast |
| dna replication | GO:0006260 | 147 | 0.011 | |
| polysaccharide metabolic process | GO:0005976 | 60 | 0.011 | |
| regulation of cell growth | GO:0001558 | 29 | 0.011 | |
| protein import into nucleus | GO:0006606 | 55 | 0.011 | |
| chemical homeostasis | GO:0048878 | 137 | 0.011 | |
| regulation of lipid biosynthetic process | GO:0046890 | 32 | 0.010 | |
| response to hypoxia | GO:0001666 | 4 | 0.010 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 10 | 0.010 | |
| multi organism cellular process | GO:0044764 | 120 | 0.010 | Yeast |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.010 | |
| carbohydrate biosynthetic process | GO:0016051 | 82 | 0.010 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.010 | |