| mitochondrion organization | GO:0007005 | 261 | 0.799 | |
| protein folding | GO:0006457 | 94 | 0.669 | |
| inner mitochondrial membrane organization | GO:0007007 | 26 | 0.651 | |
| cristae formation | GO:0042407 | 10 | 0.594 | |
| single organism developmental process | GO:0044767 | 258 | 0.423 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.359 | |
| cell aging | GO:0007569 | 70 | 0.301 | |
| proteolysis | GO:0006508 | 268 | 0.294 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.277 | |
| cellular developmental process | GO:0048869 | 191 | 0.221 | |
| protein catabolic process | GO:0030163 | 221 | 0.210 | |
| aging | GO:0007568 | 71 | 0.198 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.185 | |
| replicative cell aging | GO:0001302 | 46 | 0.182 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.123 | |
| developmental process | GO:0032502 | 261 | 0.109 | |
| cell communication | GO:0007154 | 345 | 0.108 | |
| cell fate commitment | GO:0045165 | 32 | 0.100 | |
| mitochondrial proton transporting atp synthase complex assembly | GO:0033615 | 11 | 0.093 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.090 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.088 | |
| cellular component morphogenesis | GO:0032989 | 97 | 0.084 | |
| protein processing | GO:0016485 | 64 | 0.076 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.063 | |
| single organism catabolic process | GO:0044712 | 619 | 0.059 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.059 | |
| anatomical structure development | GO:0048856 | 160 | 0.059 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.057 | |
| negative regulation of proteolysis | GO:0045861 | 33 | 0.057 | |
| regulation of sequence specific dna binding transcription factor activity | GO:0051090 | 6 | 0.052 | |
| negative regulation of protein maturation | GO:1903318 | 33 | 0.052 | |
| membrane organization | GO:0061024 | 276 | 0.047 | |
| cell differentiation | GO:0030154 | 161 | 0.047 | |
| mitochondrion inheritance | GO:0000001 | 21 | 0.046 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.044 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.044 | |
| protein complex assembly | GO:0006461 | 302 | 0.043 | |
| peptide metabolic process | GO:0006518 | 28 | 0.041 | |
| regulation of protein maturation | GO:1903317 | 34 | 0.038 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.038 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.035 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 27 | 0.035 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.034 | |
| regulation of protein phosphorylation | GO:0001932 | 75 | 0.034 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.034 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.033 | |
| protein transport | GO:0015031 | 345 | 0.032 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.032 | |
| organelle inheritance | GO:0048308 | 51 | 0.032 | |
| mitochondrion localization | GO:0051646 | 29 | 0.031 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 137 | 0.031 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.031 | |
| protein targeting | GO:0006605 | 272 | 0.027 | |
| cell development | GO:0048468 | 107 | 0.026 | |
| signaling | GO:0023052 | 208 | 0.026 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.026 | |
| protein ubiquitination | GO:0016567 | 118 | 0.025 | |
| mitochondrial membrane organization | GO:0007006 | 48 | 0.025 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.024 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.023 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.023 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.023 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.023 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.021 | |
| regulation of proteolysis | GO:0030162 | 44 | 0.021 | |
| er associated ubiquitin dependent protein catabolic process | GO:0030433 | 46 | 0.021 | |
| regulation of biological quality | GO:0065008 | 391 | 0.021 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.020 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.020 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.020 | |
| protein localization to organelle | GO:0033365 | 337 | 0.020 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.019 | |
| regulation of kinase activity | GO:0043549 | 71 | 0.019 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.019 | |
| single organism signaling | GO:0044700 | 208 | 0.019 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.019 | |
| protein phosphorylation | GO:0006468 | 197 | 0.019 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.018 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.018 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.017 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.017 | |
| regulation of actin filament based process | GO:0032970 | 31 | 0.017 | |
| regulation of signaling | GO:0023051 | 119 | 0.017 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.017 | |
| regulation of transferase activity | GO:0051338 | 83 | 0.017 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.016 | |
| misfolded or incompletely synthesized protein catabolic process | GO:0006515 | 21 | 0.016 | |
| transmembrane transport | GO:0055085 | 349 | 0.015 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.015 | |
| small molecule biosynthetic process | GO:0044283 | 258 | 0.015 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.015 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.015 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.014 | |
| positive regulation of programmed cell death | GO:0043068 | 3 | 0.014 | |
| nucleotide biosynthetic process | GO:0009165 | 79 | 0.014 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 224 | 0.013 | |
| mitochondrial genome maintenance | GO:0000002 | 40 | 0.013 | |
| regulation of hydrolase activity | GO:0051336 | 133 | 0.013 | |
| translation | GO:0006412 | 230 | 0.013 | |
| positive regulation of catabolic process | GO:0009896 | 135 | 0.013 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.013 | |
| mitochondrion distribution | GO:0048311 | 21 | 0.013 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.012 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.012 | |
| protein maturation | GO:0051604 | 76 | 0.012 | |
| homeostatic process | GO:0042592 | 227 | 0.012 | |
| signal peptide processing | GO:0006465 | 7 | 0.012 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.011 | |
| regulation of cell communication | GO:0010646 | 124 | 0.011 | |
| guanosine containing compound catabolic process | GO:1901069 | 109 | 0.011 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 49 | 0.011 | |
| ion homeostasis | GO:0050801 | 118 | 0.011 | |
| proton transporting two sector atpase complex assembly | GO:0070071 | 15 | 0.011 | |
| mitochondrial translation | GO:0032543 | 52 | 0.011 | |
| cellular response to oxidative stress | GO:0034599 | 94 | 0.011 | |
| cellular modified amino acid metabolic process | GO:0006575 | 51 | 0.011 | |
| regulation of mitochondrion organization | GO:0010821 | 20 | 0.011 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.010 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 136 | 0.010 | |
| peroxisome fission | GO:0016559 | 7 | 0.010 | |
