| rna modification | GO:0009451 | 99 | 0.994 | |
| trna modification | GO:0006400 | 75 | 0.989 | |
| ncrna processing | GO:0034470 | 330 | 0.976 | |
| trna metabolic process | GO:0006399 | 151 | 0.953 | |
| trna wobble uridine modification | GO:0002098 | 26 | 0.852 | |
| trna processing | GO:0008033 | 101 | 0.836 | |
| trna wobble base modification | GO:0002097 | 27 | 0.554 | |
| rna methylation | GO:0001510 | 39 | 0.482 | |
| rrna metabolic process | GO:0016072 | 244 | 0.397 | |
| rrna processing | GO:0006364 | 227 | 0.303 | |
| macromolecule methylation | GO:0043414 | 85 | 0.242 | |
| pseudouridine synthesis | GO:0001522 | 13 | 0.241 | |
| snrna metabolic process | GO:0016073 | 25 | 0.211 | |
| vitamin biosynthetic process | GO:0009110 | 38 | 0.168 | |
| methylation | GO:0032259 | 101 | 0.160 | |
| mrna modification | GO:0016556 | 10 | 0.145 | |
| rrna methylation | GO:0031167 | 13 | 0.136 | |
| developmental process | GO:0032502 | 261 | 0.125 | |
| regulation of cellular component biogenesis | GO:0044087 | 112 | 0.111 | |
| mitotic cytokinetic process | GO:1902410 | 45 | 0.098 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.089 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.080 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.076 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.073 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.066 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.064 | |
| sulfur compound metabolic process | GO:0006790 | 95 | 0.063 | |
| sulfur compound biosynthetic process | GO:0044272 | 53 | 0.061 | |
| pyrimidine containing compound metabolic process | GO:0072527 | 37 | 0.060 | |
| single organism catabolic process | GO:0044712 | 619 | 0.056 | |
| snorna processing | GO:0043144 | 34 | 0.056 | |
| single organism developmental process | GO:0044767 | 258 | 0.054 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.054 | |
| cytokinesis | GO:0000910 | 92 | 0.053 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.053 | |
| trna wobble position uridine thiolation | GO:0002143 | 5 | 0.048 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.047 | |
| single organism carbohydrate catabolic process | GO:0044724 | 73 | 0.046 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.046 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.045 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.043 | |
| mrna pseudouridine synthesis | GO:1990481 | 6 | 0.043 | |
| cellular component disassembly | GO:0022411 | 86 | 0.043 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.042 | |
| aging | GO:0007568 | 71 | 0.042 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.042 | |
| rrna pseudouridine synthesis | GO:0031118 | 4 | 0.042 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.041 | |
| regulation of transport | GO:0051049 | 85 | 0.041 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.041 | |
| mitotic cytokinesis | GO:0000281 | 58 | 0.040 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.040 | |
| carbohydrate catabolic process | GO:0016052 | 77 | 0.039 | |
| ribosomal small subunit biogenesis | GO:0042274 | 124 | 0.039 | |
| regulation of localization | GO:0032879 | 127 | 0.037 | |
| establishment or maintenance of cell polarity | GO:0007163 | 96 | 0.037 | |
| response to chemical | GO:0042221 | 390 | 0.036 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.035 | |
| snrna pseudouridine synthesis | GO:0031120 | 6 | 0.035 | |
| lipid metabolic process | GO:0006629 | 269 | 0.033 | |
| mitochondrion organization | GO:0007005 | 261 | 0.032 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.032 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.032 | |
| mitotic cytokinesis site selection | GO:1902408 | 35 | 0.031 | |
| establishment of cell polarity | GO:0030010 | 64 | 0.030 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.030 | |
| cell wall organization or biogenesis | GO:0071554 | 190 | 0.029 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.029 | |
| water soluble vitamin biosynthetic process | GO:0042364 | 38 | 0.028 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.028 | |
| iron sulfur cluster assembly | GO:0016226 | 22 | 0.028 | |
| cytokinetic process | GO:0032506 | 78 | 0.028 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.028 | |
| protein catabolic process | GO:0030163 | 221 | 0.027 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.026 | |
| response to organic substance | GO:0010033 | 182 | 0.025 | |
| nuclear division | GO:0000280 | 263 | 0.024 | |
| protein complex assembly | GO:0006461 | 302 | 0.024 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.024 | |
| regulation of cellular localization | GO:0060341 | 50 | 0.024 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.024 | |
| signaling | GO:0023052 | 208 | 0.024 | |
| fungal type cell wall biogenesis | GO:0009272 | 80 | 0.024 | |
| cytoskeleton dependent cytokinesis | GO:0061640 | 65 | 0.023 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.023 | |
| rrna modification | GO:0000154 | 19 | 0.023 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.023 | |
| water soluble vitamin metabolic process | GO:0006767 | 41 | 0.023 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.023 | |
| dephosphorylation | GO:0016311 | 127 | 0.022 | |
| organic hydroxy compound biosynthetic process | GO:1901617 | 81 | 0.022 | |
| trna methylation | GO:0030488 | 21 | 0.022 | |
| growth of unicellular organism as a thread of attached cells | GO:0070783 | 105 | 0.022 | |
| dna catabolic process | GO:0006308 | 42 | 0.022 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.022 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.022 | |
| mitochondrial rna metabolic process | GO:0000959 | 24 | 0.021 | |
| anatomical structure homeostasis | GO:0060249 | 74 | 0.021 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 194 | 0.021 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 80 | 0.020 | |
| snrna modification | GO:0040031 | 6 | 0.020 | |
| maturation of ssu rrna | GO:0030490 | 105 | 0.020 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.020 | |
| endocytosis | GO:0006897 | 90 | 0.020 | |
| golgi vesicle transport | GO:0048193 | 188 | 0.019 | |
| actin filament based process | GO:0030029 | 104 | 0.019 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.019 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.019 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.018 | |
| negative regulation of catabolic process | GO:0009895 | 43 | 0.018 | |
| cell aging | GO:0007569 | 70 | 0.018 | |
| cut catabolic process | GO:0071034 | 12 | 0.018 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.018 | |
| alcohol metabolic process | GO:0006066 | 112 | 0.018 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.018 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.017 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.017 | |
| regulation of er to golgi vesicle mediated transport | GO:0060628 | 7 | 0.017 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.017 | |
| metallo sulfur cluster assembly | GO:0031163 | 22 | 0.017 | |
| protein acylation | GO:0043543 | 66 | 0.017 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.017 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.017 | |
| cell division | GO:0051301 | 205 | 0.017 | |
| protein maturation | GO:0051604 | 76 | 0.017 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.017 | |
| oxidoreduction coenzyme metabolic process | GO:0006733 | 58 | 0.016 | |
| multi organism process | GO:0051704 | 233 | 0.016 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.016 | |
| pyridine containing compound biosynthetic process | GO:0072525 | 24 | 0.016 | |
| response to oxygen containing compound | GO:1901700 | 61 | 0.016 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.016 | |
| reproductive process | GO:0022414 | 248 | 0.015 | |
| nucleotide biosynthetic process | GO:0009165 | 79 | 0.015 | |
| organelle fission | GO:0048285 | 272 | 0.015 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.015 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.015 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 136 | 0.015 | |
| protein urmylation | GO:0032447 | 7 | 0.015 | |
| cellular respiration | GO:0045333 | 82 | 0.015 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.015 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.015 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.014 | |
| cut metabolic process | GO:0071043 | 12 | 0.014 | |
| regulation of cellular protein catabolic process | GO:1903362 | 36 | 0.014 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.014 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.014 | |
| positive regulation of secretion | GO:0051047 | 2 | 0.014 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.014 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.014 | |
| apoptotic process | GO:0006915 | 30 | 0.014 | |
| cell communication | GO:0007154 | 345 | 0.014 | |
| coenzyme metabolic process | GO:0006732 | 104 | 0.014 | |
| organic acid transport | GO:0015849 | 77 | 0.014 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.014 | |
| filamentous growth | GO:0030447 | 124 | 0.014 | |
| phosphatidylinositol metabolic process | GO:0046488 | 62 | 0.013 | |
| positive regulation of programmed cell death | GO:0043068 | 3 | 0.013 | |
| protein glycosylation | GO:0006486 | 57 | 0.013 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.013 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.013 | |
| regulation of biological quality | GO:0065008 | 391 | 0.013 | |
| response to uv | GO:0009411 | 4 | 0.013 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.013 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.013 | |
| pyrimidine containing compound biosynthetic process | GO:0072528 | 33 | 0.013 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.013 | |
| dna templated transcription termination | GO:0006353 | 42 | 0.013 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 147 | 0.012 | |
| maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna | GO:0000462 | 96 | 0.012 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.012 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.012 | |
| macromolecule glycosylation | GO:0043413 | 57 | 0.012 | |
| trna pseudouridine synthesis | GO:0031119 | 7 | 0.012 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.012 | |
| telomere organization | GO:0032200 | 75 | 0.012 | |
| rna dependent dna replication | GO:0006278 | 25 | 0.012 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.012 | |
| organic hydroxy compound transport | GO:0015850 | 41 | 0.012 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.012 | |
| actin filament bundle organization | GO:0061572 | 19 | 0.011 | |
| regulation of molecular function | GO:0065009 | 320 | 0.011 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.011 | |
| ncrna 3 end processing | GO:0043628 | 44 | 0.011 | |
| invasive growth in response to glucose limitation | GO:0001403 | 61 | 0.011 | |
| autophagy | GO:0006914 | 106 | 0.011 | |
| telomere maintenance via telomere lengthening | GO:0010833 | 22 | 0.011 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.011 | |
| protein folding | GO:0006457 | 94 | 0.011 | |
| rna phosphodiester bond hydrolysis | GO:0090501 | 112 | 0.011 | |
| chronological cell aging | GO:0001300 | 28 | 0.011 | |
| signal transduction | GO:0007165 | 208 | 0.011 | |
| positive regulation of intracellular protein transport | GO:0090316 | 3 | 0.011 | |
| intracellular signal transduction | GO:0035556 | 112 | 0.011 | |
| positive regulation of cytoplasmic transport | GO:1903651 | 4 | 0.011 | |
| positive regulation of nucleocytoplasmic transport | GO:0046824 | 4 | 0.011 | |
| vacuole organization | GO:0007033 | 75 | 0.011 | |
| cytokinesis site selection | GO:0007105 | 40 | 0.011 | |
| monosaccharide metabolic process | GO:0005996 | 83 | 0.011 | |
| regulation of vesicle mediated transport | GO:0060627 | 39 | 0.011 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.011 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.011 | |
| response to drug | GO:0042493 | 41 | 0.010 | |
| cofactor biosynthetic process | GO:0051188 | 80 | 0.010 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.010 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.010 | |
| regulation of cytoskeleton organization | GO:0051493 | 63 | 0.010 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.010 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.010 | |
| proteolysis | GO:0006508 | 268 | 0.010 | |
