| mitochondrion organization | GO:0007005 | 261 | 0.685 | |
| mitochondrial translation | GO:0032543 | 52 | 0.622 | |
| trna aminoacylation for mitochondrial protein translation | GO:0070127 | 9 | 0.515 | |
| translation | GO:0006412 | 230 | 0.409 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.291 | |
| mitochondrial transport | GO:0006839 | 76 | 0.255 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.242 | |
| trna aminoacylation | GO:0043039 | 35 | 0.203 | |
| trna metabolic process | GO:0006399 | 151 | 0.179 | |
| nucleobase containing compound transport | GO:0015931 | 124 | 0.169 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.150 | |
| carbohydrate derivative transport | GO:1901264 | 27 | 0.143 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.141 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.130 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.124 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.123 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.121 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.118 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.116 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.103 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.101 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.091 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.084 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.081 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.077 | |
| trna aminoacylation for protein translation | GO:0006418 | 32 | 0.071 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.071 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.064 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.063 | |
| mitochondrial rna metabolic process | GO:0000959 | 24 | 0.062 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.061 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.061 | |
| anion transport | GO:0006820 | 145 | 0.061 | |
| gtp metabolic process | GO:0046039 | 107 | 0.061 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.060 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.059 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.059 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.058 | |
| amino acid activation | GO:0043038 | 35 | 0.058 | |
| single organism catabolic process | GO:0044712 | 619 | 0.057 | |
| protein complex assembly | GO:0006461 | 302 | 0.057 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.052 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.052 | |
| small molecule biosynthetic process | GO:0044283 | 258 | 0.052 | |
| guanosine containing compound metabolic process | GO:1901068 | 111 | 0.051 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.050 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.049 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.048 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.044 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.044 | |
| nucleoside transport | GO:0015858 | 14 | 0.042 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.042 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.040 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.038 | |
| gtp catabolic process | GO:0006184 | 107 | 0.038 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.038 | |
| iron ion homeostasis | GO:0055072 | 34 | 0.037 | |
| establishment of protein localization | GO:0045184 | 367 | 0.037 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.036 | |
| ion homeostasis | GO:0050801 | 118 | 0.036 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.035 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.035 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.034 | |
| guanosine containing compound catabolic process | GO:1901069 | 109 | 0.032 | |
| regulation of biological quality | GO:0065008 | 391 | 0.032 | |
| transmembrane transport | GO:0055085 | 349 | 0.031 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.031 | |
| cellular transition metal ion homeostasis | GO:0046916 | 59 | 0.030 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.029 | |
| ncrna processing | GO:0034470 | 330 | 0.028 | |
| transition metal ion homeostasis | GO:0055076 | 59 | 0.027 | |
| homeostatic process | GO:0042592 | 227 | 0.025 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.025 | |
| organic anion transport | GO:0015711 | 114 | 0.024 | |
| organic acid transport | GO:0015849 | 77 | 0.023 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.022 | |
| trna processing | GO:0008033 | 101 | 0.022 | |
| protein maturation | GO:0051604 | 76 | 0.021 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.021 | |
| cellular respiration | GO:0045333 | 82 | 0.021 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.020 | |
| cellular iron ion homeostasis | GO:0006879 | 34 | 0.020 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.020 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.020 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.019 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.019 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.017 | |
| nucleotide transport | GO:0006862 | 19 | 0.017 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.016 | |
| cellular ketone metabolic process | GO:0042180 | 63 | 0.016 | |
| single organism cellular localization | GO:1902580 | 375 | 0.016 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.016 | |
| growth | GO:0040007 | 157 | 0.016 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.015 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.015 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.014 | |
| amino acid transport | GO:0006865 | 45 | 0.014 | |
| organophosphate ester transport | GO:0015748 | 45 | 0.013 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.013 | |
| carboxylic acid biosynthetic process | GO:0046394 | 152 | 0.013 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.013 | |
| protein processing | GO:0016485 | 64 | 0.013 | |
| regulation of hydrolase activity | GO:0051336 | 133 | 0.013 | |
| protein targeting | GO:0006605 | 272 | 0.012 | |
| generation of precursor metabolites and energy | GO:0006091 | 147 | 0.012 | |
| coenzyme metabolic process | GO:0006732 | 104 | 0.012 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.012 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.012 | |
| cellular metal ion homeostasis | GO:0006875 | 78 | 0.011 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.011 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.011 | |
| protein folding | GO:0006457 | 94 | 0.011 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.011 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.010 | |
| filamentous growth | GO:0030447 | 124 | 0.010 | |
| lipid metabolic process | GO:0006629 | 269 | 0.010 | |
| regulation of translation | GO:0006417 | 89 | 0.010 | |
