| vesicle mediated transport | GO:0016192 | 335 | 0.454 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.180 | |
| golgi vesicle transport | GO:0048193 | 188 | 0.166 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.117 | |
| er to golgi vesicle mediated transport | GO:0006888 | 86 | 0.110 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.088 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.079 | |
| phosphatidylinositol metabolic process | GO:0046488 | 62 | 0.078 | |
| intra golgi vesicle mediated transport | GO:0006891 | 22 | 0.076 | |
| ncrna processing | GO:0034470 | 330 | 0.074 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.066 | |
| mrna metabolic process | GO:0016071 | 269 | 0.066 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.061 | |
| cell communication | GO:0007154 | 345 | 0.060 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.059 | |
| establishment of protein localization to membrane | GO:0090150 | 99 | 0.055 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.053 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.052 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.051 | |
| liposaccharide metabolic process | GO:1903509 | 31 | 0.050 | |
| cation homeostasis | GO:0055080 | 105 | 0.050 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.046 | |
| single organism signaling | GO:0044700 | 208 | 0.046 | |
| phosphatidylinositol biosynthetic process | GO:0006661 | 39 | 0.046 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.045 | |
| proteolysis | GO:0006508 | 268 | 0.044 | |
| cytoskeleton organization | GO:0007010 | 230 | 0.044 | |
| signaling | GO:0023052 | 208 | 0.042 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.041 | |
| regulation of biological quality | GO:0065008 | 391 | 0.041 | |
| glycolipid metabolic process | GO:0006664 | 31 | 0.040 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.039 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.038 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.037 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.036 | |
| homeostatic process | GO:0042592 | 227 | 0.036 | |
| cellular homeostasis | GO:0019725 | 138 | 0.035 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.035 | |
| rrna metabolic process | GO:0016072 | 244 | 0.034 | |
| cellular ion homeostasis | GO:0006873 | 112 | 0.033 | |
| single organism developmental process | GO:0044767 | 258 | 0.033 | |
| protein catabolic process | GO:0030163 | 221 | 0.032 | |
| ion transport | GO:0006811 | 274 | 0.032 | |
| chemical homeostasis | GO:0048878 | 137 | 0.030 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.030 | |
| glycerolipid biosynthetic process | GO:0045017 | 71 | 0.030 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.030 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.030 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.029 | |
| protein localization to membrane | GO:0072657 | 102 | 0.029 | |
| cellular response to nutrient levels | GO:0031669 | 144 | 0.029 | |
| endomembrane system organization | GO:0010256 | 74 | 0.029 | |
| single organism membrane organization | GO:0044802 | 275 | 0.029 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.028 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.028 | |
| glycerophospholipid metabolic process | GO:0006650 | 98 | 0.027 | |
| nucleobase containing compound transport | GO:0015931 | 124 | 0.027 | |
| golgi to plasma membrane transport | GO:0006893 | 33 | 0.027 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.026 | |
| phospholipid biosynthetic process | GO:0008654 | 89 | 0.026 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.026 | |
| ion homeostasis | GO:0050801 | 118 | 0.025 | |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.025 | |
| lipid metabolic process | GO:0006629 | 269 | 0.024 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.024 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.024 | |
| vesicle organization | GO:0016050 | 68 | 0.024 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.024 | |
| cellular developmental process | GO:0048869 | 191 | 0.024 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.024 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.023 | |
| membrane lipid biosynthetic process | GO:0046467 | 54 | 0.023 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.023 | |
| rrna processing | GO:0006364 | 227 | 0.023 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.023 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.022 | |
| regulation of cell communication | GO:0010646 | 124 | 0.021 | |
| lipoprotein metabolic process | GO:0042157 | 40 | 0.021 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.021 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.021 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.021 | |
| membrane organization | GO:0061024 | 276 | 0.021 | |
| organic anion transport | GO:0015711 | 114 | 0.020 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.020 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.020 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.020 | |
| proteasomal protein catabolic process | GO:0010498 | 141 | 0.020 | |
| signal transduction | GO:0007165 | 208 | 0.020 | |
| cell wall organization or biogenesis | GO:0071554 | 190 | 0.020 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 137 | 0.020 | |
| exocytosis | GO:0006887 | 42 | 0.019 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.019 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.019 | |
| glycolipid biosynthetic process | GO:0009247 | 28 | 0.019 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.019 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.018 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.018 | |
| anion transport | GO:0006820 | 145 | 0.018 | |
| developmental process | GO:0032502 | 261 | 0.018 | |
| rna splicing via transesterification reactions | GO:0000375 | 118 | 0.018 | |
| establishment of protein localization | GO:0045184 | 367 | 0.018 | |
| rna localization | GO:0006403 | 112 | 0.018 | |
| coenzyme metabolic process | GO:0006732 | 104 | 0.017 | |
| single organism catabolic process | GO:0044712 | 619 | 0.017 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.017 | |
| transition metal ion homeostasis | GO:0055076 | 59 | 0.017 | |
| phosphorylation | GO:0016310 | 291 | 0.017 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.017 | |
| protein phosphorylation | GO:0006468 | 197 | 0.017 | |
| cellular chemical homeostasis | GO:0055082 | 123 | 0.017 | |
| autophagy | GO:0006914 | 106 | 0.017 | |
| membrane lipid metabolic process | GO:0006643 | 67 | 0.017 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.017 | |
| cellular transition metal ion homeostasis | GO:0046916 | 59 | 0.017 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.017 | |
| trna metabolic process | GO:0006399 | 151 | 0.017 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.016 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.016 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.016 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 137 | 0.016 | |
| rna modification | GO:0009451 | 99 | 0.016 | |
| multi organism process | GO:0051704 | 233 | 0.016 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.016 | |
| cellular metal ion homeostasis | GO:0006875 | 78 | 0.016 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.015 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.015 | |
| intracellular signal transduction | GO:0035556 | 112 | 0.015 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.015 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.015 | |
| regulation of molecular function | GO:0065009 | 320 | 0.015 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.015 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.015 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.015 | |
| response to external stimulus | GO:0009605 | 158 | 0.015 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.015 | |
| protein deubiquitination | GO:0016579 | 17 | 0.015 | |
| regulation of intracellular signal transduction | GO:1902531 | 78 | 0.014 | |
| macromolecule glycosylation | GO:0043413 | 57 | 0.014 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.014 | |
| endocytosis | GO:0006897 | 90 | 0.014 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.014 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.014 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.014 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.014 | |
| trna modification | GO:0006400 | 75 | 0.014 | |
| response to starvation | GO:0042594 | 96 | 0.014 | |
| sexual sporulation | GO:0034293 | 113 | 0.014 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.014 | |
| protein lipidation | GO:0006497 | 40 | 0.014 | |
| nucleic acid transport | GO:0050657 | 94 | 0.014 | |
| glycoprotein biosynthetic process | GO:0009101 | 61 | 0.013 | |
| anatomical structure development | GO:0048856 | 160 | 0.013 | |
| retrograde vesicle mediated transport golgi to er | GO:0006890 | 28 | 0.013 | |
| chromatin silencing | GO:0006342 | 147 | 0.013 | |
| rna transport | GO:0050658 | 92 | 0.013 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.013 | |
| rna splicing | GO:0008380 | 131 | 0.013 | |
| macromolecule methylation | GO:0043414 | 85 | 0.013 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.013 | |
| regulation of localization | GO:0032879 | 127 | 0.013 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.013 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.013 | |
| small gtpase mediated signal transduction | GO:0007264 | 36 | 0.013 | |
| establishment of rna localization | GO:0051236 | 92 | 0.013 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.013 | |
| ascospore formation | GO:0030437 | 107 | 0.013 | |
| maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna | GO:0000466 | 80 | 0.013 | |
| positive regulation of programmed cell death | GO:0043068 | 3 | 0.013 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.013 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.012 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.012 | |
| response to chemical | GO:0042221 | 390 | 0.012 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.012 | |
| cleavage involved in rrna processing | GO:0000469 | 69 | 0.012 | |
| maturation of 5 8s rrna | GO:0000460 | 80 | 0.012 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.012 | |
| peptidyl amino acid modification | GO:0018193 | 116 | 0.012 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 260 | 0.012 | |
| organelle assembly | GO:0070925 | 118 | 0.012 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.012 | |
| sexual reproduction | GO:0019953 | 216 | 0.012 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.012 | |
| reproductive process | GO:0022414 | 248 | 0.012 | |
| gpi anchor biosynthetic process | GO:0006506 | 26 | 0.012 | |
| lipoprotein biosynthetic process | GO:0042158 | 40 | 0.011 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.011 | |
| protein ubiquitination | GO:0016567 | 118 | 0.011 | |
| regulation of cell cycle process | GO:0010564 | 150 | 0.011 | |
| transmembrane transport | GO:0055085 | 349 | 0.011 | |
| response to hypoxia | GO:0001666 | 4 | 0.011 | |
| intracellular protein transport | GO:0006886 | 319 | 0.011 | |
| er associated ubiquitin dependent protein catabolic process | GO:0030433 | 46 | 0.011 | |
| nuclear export | GO:0051168 | 124 | 0.011 | |
| regulation of cell division | GO:0051302 | 113 | 0.011 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.011 | |
| cell surface receptor signaling pathway | GO:0007166 | 38 | 0.011 | |
| cellular respiration | GO:0045333 | 82 | 0.011 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.011 | |
| protein localization to golgi apparatus | GO:0034067 | 13 | 0.011 | |
| response to nutrient levels | GO:0031667 | 150 | 0.011 | |
| mitochondrion organization | GO:0007005 | 261 | 0.011 | |
| protein modification by small protein removal | GO:0070646 | 29 | 0.011 | |
| rna export from nucleus | GO:0006405 | 88 | 0.011 | |
| cellular response to abiotic stimulus | GO:0071214 | 62 | 0.011 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 136 | 0.011 | |
| cell division | GO:0051301 | 205 | 0.011 | |
| cellular carbohydrate metabolic process | GO:0044262 | 135 | 0.010 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 125 | 0.010 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.010 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.010 | |
| glycerophospholipid biosynthetic process | GO:0046474 | 68 | 0.010 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.010 | |
| sporulation resulting in formation of a cellular spore | GO:0030435 | 129 | 0.010 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.010 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.010 | |
