| golgi vesicle transport | GO:0048193 | 188 | 1.000 | |
| er to golgi vesicle mediated transport | GO:0006888 | 86 | 0.999 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.994 | |
| membrane lipid metabolic process | GO:0006643 | 67 | 0.274 | |
| retrograde transport endosome to golgi | GO:0042147 | 33 | 0.271 | |
| endosomal transport | GO:0016197 | 86 | 0.247 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.239 | |
| vesicle organization | GO:0016050 | 68 | 0.237 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.227 | |
| signal transduction | GO:0007165 | 208 | 0.211 | |
| intracellular signal transduction | GO:0035556 | 112 | 0.196 | |
| cellular response to starvation | GO:0009267 | 90 | 0.195 | |
| gtp metabolic process | GO:0046039 | 107 | 0.194 | |
| cell communication | GO:0007154 | 345 | 0.179 | |
| regulation of ras gtpase activity | GO:0032318 | 41 | 0.176 | |
| regulation of signaling | GO:0023051 | 119 | 0.167 | |
| signaling | GO:0023052 | 208 | 0.160 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.157 | |
| gtp catabolic process | GO:0006184 | 107 | 0.152 | |
| cellular response to nutrient levels | GO:0031669 | 144 | 0.147 | |
| early endosome to golgi transport | GO:0034498 | 11 | 0.131 | |
| cvt pathway | GO:0032258 | 37 | 0.131 | |
| intra golgi vesicle mediated transport | GO:0006891 | 22 | 0.130 | |
| guanosine containing compound metabolic process | GO:1901068 | 111 | 0.130 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.121 | |
| guanosine containing compound catabolic process | GO:1901069 | 109 | 0.115 | |
| regulation of gtpase activity | GO:0043087 | 84 | 0.113 | |
| protein complex assembly | GO:0006461 | 302 | 0.094 | |
| protein localization to pre autophagosomal structure | GO:0034497 | 7 | 0.092 | |
| glycolipid metabolic process | GO:0006664 | 31 | 0.087 | |
| macroautophagy | GO:0016236 | 55 | 0.085 | |
| regulation of ras protein signal transduction | GO:0046578 | 47 | 0.082 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.080 | |
| single organism signaling | GO:0044700 | 208 | 0.079 | |
| establishment of protein localization to vacuole | GO:0072666 | 91 | 0.078 | |
| response to external stimulus | GO:0009605 | 158 | 0.075 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.074 | |
| response to nutrient levels | GO:0031667 | 150 | 0.074 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.071 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.071 | |
| response to starvation | GO:0042594 | 96 | 0.068 | |
| membrane lipid biosynthetic process | GO:0046467 | 54 | 0.068 | |
| protein localization to vacuole | GO:0072665 | 92 | 0.061 | |
| small gtpase mediated signal transduction | GO:0007264 | 36 | 0.060 | |
| regulation of cell communication | GO:0010646 | 124 | 0.057 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.054 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.054 | |
| nuclear division | GO:0000280 | 263 | 0.054 | |
| autophagy | GO:0006914 | 106 | 0.052 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.051 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 106 | 0.051 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.051 | |
| response to chemical | GO:0042221 | 390 | 0.050 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 47 | 0.050 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.049 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.048 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.047 | |
| regulation of nucleoside metabolic process | GO:0009118 | 106 | 0.047 | |
| ribosomal small subunit biogenesis | GO:0042274 | 124 | 0.047 | |
| peroxisome degradation | GO:0030242 | 22 | 0.046 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.046 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.046 | |
| vacuolar transport | GO:0007034 | 145 | 0.045 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.045 | |
| protein transport | GO:0015031 | 345 | 0.045 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.045 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.044 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.043 | |
| gpi anchor metabolic process | GO:0006505 | 28 | 0.042 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.042 | |
| vacuole organization | GO:0007033 | 75 | 0.041 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.041 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.040 | |
| protein targeting to vacuole | GO:0006623 | 91 | 0.040 | |
| protein folding | GO:0006457 | 94 | 0.039 | |
| regulation of biological quality | GO:0065008 | 391 | 0.039 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.039 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.037 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.036 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.035 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.035 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.035 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.035 | |
| protein lipidation | GO:0006497 | 40 | 0.034 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.033 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.032 | |
| glycerophospholipid biosynthetic process | GO:0046474 | 68 | 0.031 | |
| gpi anchor biosynthetic process | GO:0006506 | 26 | 0.031 | |
| regulation of intracellular signal transduction | GO:1902531 | 78 | 0.030 | |
| rrna processing | GO:0006364 | 227 | 0.030 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.030 | |
| regulation of hydrolase activity | GO:0051336 | 133 | 0.030 | |
| single organism catabolic process | GO:0044712 | 619 | 0.030 | |
| phosphatidylinositol metabolic process | GO:0046488 | 62 | 0.029 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.029 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.029 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 109 | 0.028 | |
| phospholipid biosynthetic process | GO:0008654 | 89 | 0.028 | |
| peroxisome organization | GO:0007031 | 68 | 0.028 | |
| establishment of protein localization to membrane | GO:0090150 | 99 | 0.027 | |
| membrane fusion | GO:0061025 | 73 | 0.026 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.026 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.026 | |
| protein localization to membrane | GO:0072657 | 102 | 0.026 | |
| reproductive process in single celled organism | GO:0022413 | 145 | 0.026 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.026 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.026 | |
| organelle localization | GO:0051640 | 128 | 0.025 | |
| liposaccharide metabolic process | GO:1903509 | 31 | 0.025 | |
| exocytosis | GO:0006887 | 42 | 0.025 | |
| ion transport | GO:0006811 | 274 | 0.025 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.024 | |
| protein localization to organelle | GO:0033365 | 337 | 0.024 | |
| glycolipid biosynthetic process | GO:0009247 | 28 | 0.023 | |
| lipid metabolic process | GO:0006629 | 269 | 0.023 | |
| vesicle fusion with golgi apparatus | GO:0048280 | 7 | 0.023 | |
| intracellular protein transport | GO:0006886 | 319 | 0.022 | |
| reproduction of a single celled organism | GO:0032505 | 191 | 0.022 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.021 | |
| copii coated vesicle budding | GO:0090114 | 12 | 0.021 | |
| rab protein signal transduction | GO:0032482 | 0 | 0.021 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.021 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.021 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.021 | |
| membrane invagination | GO:0010324 | 43 | 0.020 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.020 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.020 | |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.020 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.020 | |
| vesicle fusion | GO:0006906 | 33 | 0.020 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.020 | |
| retrograde vesicle mediated transport golgi to er | GO:0006890 | 28 | 0.020 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.020 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.020 | |
| regulation of molecular function | GO:0065009 | 320 | 0.019 | |
| cell development | GO:0048468 | 107 | 0.019 | |
| single organism membrane fusion | GO:0044801 | 71 | 0.019 | |
| single organism membrane organization | GO:0044802 | 275 | 0.019 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.019 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.018 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.018 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.018 | |
| fungal type cell wall organization or biogenesis | GO:0071852 | 169 | 0.018 | |
| protein maturation | GO:0051604 | 76 | 0.018 | |
| regulation of rab protein signal transduction | GO:0032483 | 17 | 0.017 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.017 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.017 | |
| glycerophospholipid metabolic process | GO:0006650 | 98 | 0.017 | |
| protein targeting | GO:0006605 | 272 | 0.016 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.016 | |
| regulation of translation | GO:0006417 | 89 | 0.016 | |
| single organism cellular localization | GO:1902580 | 375 | 0.016 | |
| endoplasmic reticulum organization | GO:0007029 | 30 | 0.016 | |
| golgi to plasma membrane transport | GO:0006893 | 33 | 0.015 | |
| anatomical structure development | GO:0048856 | 160 | 0.015 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.015 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.015 | |
| positive regulation of secretion by cell | GO:1903532 | 2 | 0.015 | |
| maintenance of protein location | GO:0045185 | 53 | 0.014 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.014 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.014 | |
| regulation of transport | GO:0051049 | 85 | 0.014 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.014 | |
| proteasomal protein catabolic process | GO:0010498 | 141 | 0.014 | |
| phosphatidylinositol biosynthetic process | GO:0006661 | 39 | 0.014 | |
| vesicle docking | GO:0048278 | 16 | 0.014 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.014 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.014 | |
| nuclear export | GO:0051168 | 124 | 0.014 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.013 | |
| sporulation resulting in formation of a cellular spore | GO:0030435 | 129 | 0.013 | |
| positive regulation of secretion | GO:0051047 | 2 | 0.013 | |
| organelle assembly | GO:0070925 | 118 | 0.013 | |
| membrane budding | GO:0006900 | 22 | 0.013 | |
| cellular component disassembly | GO:0022411 | 86 | 0.013 | |
| sexual reproduction | GO:0019953 | 216 | 0.013 | |
| microautophagy | GO:0016237 | 43 | 0.013 | |
| regulation of nucleotide metabolic process | GO:0006140 | 110 | 0.013 | |
| piecemeal microautophagy of nucleus | GO:0034727 | 33 | 0.013 | |
| lipid modification | GO:0030258 | 37 | 0.013 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.013 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.012 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.012 | |
| membrane docking | GO:0022406 | 22 | 0.012 | |
| organelle fusion | GO:0048284 | 85 | 0.012 | |
| sexual sporulation resulting in formation of a cellular spore | GO:0043935 | 113 | 0.012 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.012 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.012 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.012 | |
| positive regulation of transport | GO:0051050 | 32 | 0.012 | |
| membrane organization | GO:0061024 | 276 | 0.012 | |
| regulation of nucleotide catabolic process | GO:0030811 | 106 | 0.011 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.011 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.011 | |
| cellular developmental process | GO:0048869 | 191 | 0.011 | |
| maintenance of location in cell | GO:0051651 | 58 | 0.011 | |
| post golgi vesicle mediated transport | GO:0006892 | 72 | 0.011 | |
| cation transport | GO:0006812 | 166 | 0.011 | |
| translation | GO:0006412 | 230 | 0.011 | |
| lipoprotein metabolic process | GO:0042157 | 40 | 0.011 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.010 | |
| protein targeting to membrane | GO:0006612 | 52 | 0.010 | |
| ion homeostasis | GO:0050801 | 118 | 0.010 | |
| multi organism process | GO:0051704 | 233 | 0.010 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.010 | |
| protein processing | GO:0016485 | 64 | 0.010 | |
