| intracellular protein transmembrane transport | GO:0065002 | 80 | 0.320 | |
| mitochondrial transport | GO:0006839 | 76 | 0.308 | |
| protein transmembrane transport | GO:0071806 | 82 | 0.241 | |
| establishment of protein localization to mitochondrion | GO:0072655 | 63 | 0.148 | |
| protein localization to mitochondrion | GO:0070585 | 63 | 0.134 | |
| intracellular protein transport | GO:0006886 | 319 | 0.117 | |
| protein targeting to mitochondrion | GO:0006626 | 56 | 0.114 | |
| protein localization to organelle | GO:0033365 | 337 | 0.103 | |
| single organism cellular localization | GO:1902580 | 375 | 0.095 | |
| protein targeting | GO:0006605 | 272 | 0.081 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.067 | |
| single organism membrane organization | GO:0044802 | 275 | 0.066 | |
| response to chemical | GO:0042221 | 390 | 0.063 | |
| outer mitochondrial membrane organization | GO:0007008 | 13 | 0.063 | |
| membrane organization | GO:0061024 | 276 | 0.058 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.058 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.055 | |
| mrna metabolic process | GO:0016071 | 269 | 0.055 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.052 | |
| establishment of protein localization | GO:0045184 | 367 | 0.051 | |
| establishment of protein localization to membrane | GO:0090150 | 99 | 0.051 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.049 | |
| nucleic acid transport | GO:0050657 | 94 | 0.047 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.046 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.045 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.044 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.042 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.042 | |
| rna localization | GO:0006403 | 112 | 0.042 | |
| lipid metabolic process | GO:0006629 | 269 | 0.037 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.037 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.037 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.037 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.036 | |
| mrna processing | GO:0006397 | 185 | 0.036 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.036 | |
| protein import | GO:0017038 | 122 | 0.035 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.035 | |
| rna transport | GO:0050658 | 92 | 0.034 | |
| intracellular protein transmembrane import | GO:0044743 | 67 | 0.033 | |
| mitochondrial membrane organization | GO:0007006 | 48 | 0.032 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.032 | |
| transmembrane transport | GO:0055085 | 349 | 0.031 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.030 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.029 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.028 | |
| dna conformation change | GO:0071103 | 98 | 0.028 | |
| negative regulation of cellular component organization | GO:0051129 | 109 | 0.027 | |
| protein transport | GO:0015031 | 345 | 0.027 | |
| response to osmotic stress | GO:0006970 | 83 | 0.026 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.026 | |
| response to external stimulus | GO:0009605 | 158 | 0.025 | |
| establishment of rna localization | GO:0051236 | 92 | 0.024 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.024 | |
| protein localization to membrane | GO:0072657 | 102 | 0.024 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.023 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.023 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.023 | |
| protein catabolic process | GO:0030163 | 221 | 0.023 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.023 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.023 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.023 | |
| single organism catabolic process | GO:0044712 | 619 | 0.023 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.023 | |
| chromatin organization | GO:0006325 | 242 | 0.022 | |
| rrna metabolic process | GO:0016072 | 244 | 0.021 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.021 | |
| cellular component disassembly | GO:0022411 | 86 | 0.020 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.020 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.020 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.020 | |
| protein complex assembly | GO:0006461 | 302 | 0.020 | |
| dna recombination | GO:0006310 | 172 | 0.019 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.019 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.019 | |
| oxidation reduction process | GO:0055114 | 353 | 0.019 | |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.018 | |
| cellular protein complex disassembly | GO:0043624 | 42 | 0.018 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.018 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.018 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.018 | |
| protein import into mitochondrial matrix | GO:0030150 | 20 | 0.018 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.018 | |
| protein complex disassembly | GO:0043241 | 70 | 0.017 | |
| cell communication | GO:0007154 | 345 | 0.017 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.017 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.017 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.017 | |
| organelle localization | GO:0051640 | 128 | 0.017 | |
| generation of precursor metabolites and energy | GO:0006091 | 147 | 0.017 | |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.017 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.016 | |
| rna catabolic process | GO:0006401 | 118 | 0.016 | |
| proteolysis | GO:0006508 | 268 | 0.016 | |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.016 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.016 | |
| anatomical structure formation involved in morphogenesis | GO:0048646 | 136 | 0.016 | |
| positive regulation of programmed cell death | GO:0043068 | 3 | 0.016 | |
| cellular response to oxidative stress | GO:0034599 | 94 | 0.016 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.015 | |
| dephosphorylation | GO:0016311 | 127 | 0.015 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.015 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.015 | |
| regulation of biological quality | GO:0065008 | 391 | 0.015 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 42 | 0.015 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.014 | |
| sexual reproduction | GO:0019953 | 216 | 0.014 | |
| translation | GO:0006412 | 230 | 0.014 | |
| cell division | GO:0051301 | 205 | 0.014 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.014 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.014 | |
| response to nutrient levels | GO:0031667 | 150 | 0.014 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.014 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.013 | |
| regulation of transcription from rna polymerase ii promoter in response to stress | GO:0043618 | 51 | 0.013 | |
| regulation of dna replication | GO:0006275 | 51 | 0.013 | |
| ribosomal small subunit biogenesis | GO:0042274 | 124 | 0.013 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.013 | |
| carboxylic acid biosynthetic process | GO:0046394 | 152 | 0.013 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.013 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.012 | |
| phosphorylation | GO:0016310 | 291 | 0.012 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.012 | |
| developmental process | GO:0032502 | 261 | 0.012 | |
| dna packaging | GO:0006323 | 55 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.012 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.012 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.012 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.012 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.012 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.012 | |
| response to oxidative stress | GO:0006979 | 99 | 0.012 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.012 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.011 | |
| mitochondrial genome maintenance | GO:0000002 | 40 | 0.011 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.011 | |
| sporulation resulting in formation of a cellular spore | GO:0030435 | 129 | 0.011 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 80 | 0.011 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.011 | |
| negative regulation of organelle organization | GO:0010639 | 103 | 0.011 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.011 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.011 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.011 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.011 | |
| regulation of protein complex assembly | GO:0043254 | 77 | 0.011 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.011 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.011 | |
| chemical homeostasis | GO:0048878 | 137 | 0.011 | |
| translational elongation | GO:0006414 | 32 | 0.011 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.011 | |
| gene silencing | GO:0016458 | 151 | 0.011 | |
| fatty acid metabolic process | GO:0006631 | 51 | 0.011 | |
| organelle assembly | GO:0070925 | 118 | 0.010 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.010 | |
| regulation of lipid biosynthetic process | GO:0046890 | 32 | 0.010 | |
| cell differentiation | GO:0030154 | 161 | 0.010 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.010 | |