| positive regulation of histone modification | GO:0031058 | 1 | 0.310 | |
| positive regulation of chromatin modification | GO:1903310 | 1 | 0.246 | |
| cellular biosynthetic process | GO:0044249 | 286 | 0.179 | |
| regulation of histone h3 k9 methylation | GO:0051570 | 2 | 0.165 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 3 | 0.163 | |
| cellular aromatic compound metabolic process | GO:0006725 | 295 | 0.141 | |
| nucleobase containing compound metabolic process | GO:0006139 | 274 | 0.139 | |
| cellular nitrogen compound metabolic process | GO:0034641 | 290 | 0.120 | |
| amine metabolic process | GO:0009308 | 2 | 0.107 | |
| histone h4 k20 methylation | GO:0034770 | 2 | 0.107 | |
| cognition | GO:0050890 | 1 | 0.104 | |
| methylation | GO:0032259 | 22 | 0.103 | |
| peptidyl lysine trimethylation | GO:0018023 | 1 | 0.096 | |
| nucleic acid metabolic process | GO:0090304 | 244 | 0.094 | |
| regulation of histone methylation | GO:0031060 | 3 | 0.092 | |
| histone h3 k36 methylation | GO:0010452 | 2 | 0.091 | |
| positive regulation of lymphocyte mediated immunity | GO:0002708 | 1 | 0.091 | |
| histone h3 k4 methylation | GO:0051568 | 2 | 0.088 | |
| protein acetylation | GO:0006473 | 2 | 0.087 | |
| skeletal system development | GO:0001501 | 181 | 0.086 | |
| peptidyl lysine acetylation | GO:0018394 | 2 | 0.086 | |
| organic substance biosynthetic process | GO:1901576 | 289 | 0.085 | |
| regulation of metabolic process | GO:0019222 | 359 | 0.085 | |
| cellular amine metabolic process | GO:0044106 | 2 | 0.083 | |
| regulation of macromolecule metabolic process | GO:0060255 | 317 | 0.083 | |
| negative regulation of ras protein signal transduction | GO:0046580 | 1 | 0.081 | |
| histone methylation | GO:0016571 | 13 | 0.080 | |
| cellular ketone metabolic process | GO:0042180 | 11 | 0.080 | |
| internal protein amino acid acetylation | GO:0006475 | 2 | 0.075 | |
| protein methylation | GO:0006479 | 13 | 0.075 | |
| negative regulation of small gtpase mediated signal transduction | GO:0051058 | 1 | 0.074 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.074 | |
| regulation of cell activation | GO:0050865 | 1 | 0.074 | |
| regulation of chromatin modification | GO:1903308 | 5 | 0.069 | |
| larval development | GO:0002164 | 2 | 0.067 | |
| histone h3 k9 methylation | GO:0051567 | 5 | 0.067 | |
| cell cycle | GO:0007049 | 93 | 0.067 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 213 | 0.066 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.066 | |
| positive regulation of chromosome organization | GO:2001252 | 1 | 0.065 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 1 | 0.065 | |
| cellular macromolecule biosynthetic process | GO:0034645 | 224 | 0.061 | |
| nitrogen compound metabolic process | GO:0006807 | 319 | 0.061 | |
| heterocycle metabolic process | GO:0046483 | 290 | 0.060 | |
| aging | GO:0007568 | 2 | 0.060 | |
| multicellular organism growth | GO:0035264 | 4 | 0.060 | |
| histone h3 k9 modification | GO:0061647 | 5 | 0.059 | |
| organic cyclic compound metabolic process | GO:1901360 | 301 | 0.057 | |
| macromolecule biosynthetic process | GO:0009059 | 227 | 0.056 | |
| organelle organization | GO:0006996 | 227 | 0.056 | |
| regulation of multicellular organism growth | GO:0040014 | 4 | 0.055 | |
| regulation of protein complex assembly | GO:0043254 | 3 | 0.055 | |
| regulation of nitrogen compound metabolic process | GO:0051171 | 251 | 0.055 | |
| biosynthetic process | GO:0009058 | 294 | 0.055 | |
| aromatic compound biosynthetic process | GO:0019438 | 217 | 0.055 | |
| regulation of establishment of protein localization | GO:0070201 | 4 | 0.054 | |
| organic acid metabolic process | GO:0006082 | 31 | 0.054 | |
| cellular macromolecule metabolic process | GO:0044260 | 391 | 0.053 | |
| b cell activation | GO:0042113 | 2 | 0.052 | |
| translational initiation | GO:0006413 | 3 | 0.052 | |
| regulation of gene expression | GO:0010468 | 265 | 0.049 | |
| internal peptidyl lysine acetylation | GO:0018393 | 2 | 0.048 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 7 | 0.048 | |
| regulation of cellular metabolic process | GO:0031323 | 320 | 0.048 | |
| regulation of developmental process | GO:0050793 | 247 | 0.046 | Mouse |
| centrosome organization | GO:0051297 | 1 | 0.045 | |
| mitotic cell cycle process | GO:1903047 | 48 | 0.045 | |
| immunoglobulin mediated immune response | GO:0016064 | 3 | 0.044 | |
| non recombinational repair | GO:0000726 | 2 | 0.044 | |
| positive regulation of protein complex assembly | GO:0031334 | 2 | 0.043 | |
| dna alkylation | GO:0006305 | 8 | 0.043 | |
| dna modification | GO:0006304 | 8 | 0.042 | |
| digestive system development | GO:0055123 | 289 | 0.041 | |
| positive regulation of immune effector process | GO:0002699 | 3 | 0.041 | |
| organic cyclic compound biosynthetic process | GO:1901362 | 223 | 0.040 | |
| histone lysine methylation | GO:0034968 | 12 | 0.040 | |
| g2 dna damage checkpoint | GO:0031572 | 3 | 0.040 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 271 | 0.039 | |
| covalent chromatin modification | GO:0016569 | 20 | 0.039 | |
| macromolecule methylation | GO:0043414 | 19 | 0.039 | |
| gene expression | GO:0010467 | 252 | 0.039 | |
| mitotic dna integrity checkpoint | GO:0044774 | 4 | 0.039 | |
| growth | GO:0040007 | 174 | 0.038 | |
| immune system process | GO:0002376 | 241 | 0.037 | |
| establishment of localization | GO:0051234 | 244 | 0.037 | |
| oxoacid metabolic process | GO:0043436 | 31 | 0.037 | |
| regulation of gene expression epigenetic | GO:0040029 | 11 | 0.037 | |
| positive regulation of cell activation | GO:0050867 | 1 | 0.036 | |
| nucleobase containing compound biosynthetic process | GO:0034654 | 205 | 0.034 | |
| negative regulation of biological process | GO:0048519 | 304 | 0.034 | Mouse |
| microtubule organizing center organization | GO:0031023 | 1 | 0.034 | |
| meiotic chromosome segregation | GO:0045132 | 3 | 0.034 | |
| single organism metabolic process | GO:0044710 | 217 | 0.034 | |
| small molecule metabolic process | GO:0044281 | 77 | 0.033 | |
| digestive tract development | GO:0048565 | 265 | 0.033 | |
| single organism organelle organization | GO:1902589 | 199 | 0.033 | |
| cellular nitrogen compound biosynthetic process | GO:0044271 | 218 | 0.033 | |
| positive regulation of cellular process | GO:0048522 | 201 | 0.033 | |
| protein acylation | GO:0043543 | 3 | 0.033 | |
| mitotic dna damage checkpoint | GO:0044773 | 4 | 0.032 | |
| macromolecular complex subunit organization | GO:0043933 | 74 | 0.032 | |
| macromolecule modification | GO:0043412 | 111 | 0.032 | |
| homeostatic process | GO:0042592 | 142 | 0.032 | |
| regulation of macromolecule biosynthetic process | GO:0010556 | 225 | 0.031 | |
| regulation of dna recombination | GO:0000018 | 2 | 0.031 | |
| lymphocyte mediated immunity | GO:0002449 | 5 | 0.031 | |
| chromatin modification | GO:0016568 | 21 | 0.031 | |
| positive regulation of cell cycle | GO:0045787 | 3 | 0.030 | |
| rna metabolic process | GO:0016070 | 219 | 0.030 | |
| positive regulation of transport | GO:0051050 | 2 | 0.030 | |
| response to chemical | GO:0042221 | 320 | 0.030 | |
| cytokinesis | GO:0000910 | 3 | 0.030 | |
| regulation of cellular amine metabolic process | GO:0033238 | 0 | 0.029 | |
| cell morphogenesis | GO:0000902 | 289 | 0.029 | |
| protein alkylation | GO:0008213 | 13 | 0.029 | |
| b cell mediated immunity | GO:0019724 | 3 | 0.029 | |
| response to light stimulus | GO:0009416 | 46 | 0.028 | |
| meiotic cell cycle process | GO:1903046 | 3 | 0.028 | |
| signal transduction | GO:0007165 | 455 | 0.027 | |
| cellular component biogenesis | GO:0044085 | 178 | 0.027 | |
| regulation of cellular macromolecule biosynthetic process | GO:2000112 | 222 | 0.027 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 3 | 0.027 | |
| chromosome organization | GO:0051276 | 31 | 0.027 | |
| locomotion | GO:0040011 | 313 | 0.027 | |
| rna biosynthetic process | GO:0032774 | 181 | 0.027 | |
| regulation of nucleobase containing compound metabolic process | GO:0019219 | 250 | 0.026 | |
| regulation of protein targeting | GO:1903533 | 2 | 0.026 | |
| positive regulation of dna metabolic process | GO:0051054 | 1 | 0.026 | |
| regulation of protein metabolic process | GO:0051246 | 56 | 0.026 | |
| transcription dna templated | GO:0006351 | 181 | 0.026 | |
| multi organism process | GO:0051704 | 134 | 0.025 | |
| cell cycle g1 s phase transition | GO:0044843 | 1 | 0.025 | |
| response to amino acid | GO:0043200 | 2 | 0.025 | |
| apoptotic process | GO:0006915 | 116 | 0.025 | |
| immune system development | GO:0002520 | 191 | 0.025 | |
| macromolecular complex disassembly | GO:0032984 | 1 | 0.024 | |
| peptidyl lysine methylation | GO:0018022 | 3 | 0.024 | |
| regulation of response to stimulus | GO:0048583 | 269 | 0.024 | |
| sister chromatid cohesion | GO:0007062 | 2 | 0.024 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 3 | 0.024 | |
| regulation of biosynthetic process | GO:0009889 | 250 | 0.024 | |
| cell cycle process | GO:0022402 | 53 | 0.024 | |
| negative regulation of dna metabolic process | GO:0051053 | 4 | 0.023 | |
| regionalization | GO:0003002 | 274 | 0.023 | |
| negative regulation of transcription dna templated | GO:0045892 | 45 | 0.023 | |
| negative regulation of cellular process | GO:0048523 | 283 | 0.023 | Mouse |
| response to abiotic stimulus | GO:0009628 | 122 | 0.023 | |
| negative regulation of gene expression | GO:0010629 | 65 | 0.023 | |
| reciprocal dna recombination | GO:0035825 | 1 | 0.023 | |
| g2 m transition of mitotic cell cycle | GO:0000086 | 4 | 0.022 | |
| cellular amino acid metabolic process | GO:0006520 | 7 | 0.022 | |
| positive regulation of biological process | GO:0048518 | 253 | 0.022 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 80 | 0.022 | |
| cellular component disassembly | GO:0022411 | 1 | 0.022 | |
| segmentation | GO:0035282 | 97 | 0.022 | |
| localization of cell | GO:0051674 | 244 | 0.021 | |
| regulation of production of molecular mediator of immune response | GO:0002700 | 1 | 0.021 | |
| mitotic cell cycle embryonic | GO:0045448 | 2 | 0.021 | |
| programmed cell death | GO:0012501 | 119 | 0.021 | |
| rna catabolic process | GO:0006401 | 7 | 0.021 | |
| response to drug | GO:0042493 | 3 | 0.021 | |
| cell migration | GO:0016477 | 237 | 0.021 | |
| adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | GO:0002460 | 4 | 0.021 | |
| heterocycle biosynthetic process | GO:0018130 | 215 | 0.021 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 59 | 0.021 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.020 | |
| cellular component movement | GO:0006928 | 335 | 0.020 | |
| regulation of cellular biosynthetic process | GO:0031326 | 245 | 0.020 | |
| response to radiation | GO:0009314 | 51 | 0.020 | |
| modification dependent protein catabolic process | GO:0019941 | 3 | 0.020 | |
| chemosensory behavior | GO:0007635 | 1 | 0.020 | |
| rna localization | GO:0006403 | 4 | 0.020 | |
| regulation of chromatin organization | GO:1902275 | 5 | 0.020 | |
| nuclear pore organization | GO:0006999 | 2 | 0.020 | |
| neurological system process | GO:0050877 | 62 | 0.020 | |
| carboxylic acid metabolic process | GO:0019752 | 22 | 0.020 | |
| regulation of biological quality | GO:0065008 | 263 | 0.020 | |
| regulation of histone modification | GO:0031056 | 5 | 0.020 | |
| maintenance of location | GO:0051235 | 4 | 0.020 | |
| regulation of protein transport | GO:0051223 | 3 | 0.019 | |
| somatic cell dna recombination | GO:0016444 | 1 | 0.019 | |
| regulation of dna replication | GO:0006275 | 3 | 0.019 | |
| cellular component assembly | GO:0022607 | 170 | 0.019 | |
| protein complex localization | GO:0031503 | 1 | 0.019 | |
| response to organic substance | GO:0010033 | 153 | 0.019 | |
| negative regulation of chromatin modification | GO:1903309 | 1 | 0.018 | |
| protein metabolic process | GO:0019538 | 183 | 0.018 | |
| regulation of mitotic cell cycle | GO:0007346 | 25 | 0.018 | |
| regulation of primary metabolic process | GO:0080090 | 311 | 0.018 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 3 | 0.017 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 76 | 0.017 | |
| system process | GO:0003008 | 185 | 0.017 | |
| tube morphogenesis | GO:0035239 | 349 | 0.017 | |
| regulation of dna metabolic process | GO:0051052 | 11 | 0.017 | |
| positive regulation of protein metabolic process | GO:0051247 | 23 | 0.017 | |
| response to endogenous stimulus | GO:0009719 | 83 | 0.017 | |
| macromolecular complex assembly | GO:0065003 | 35 | 0.016 | |
| regulation of programmed cell death | GO:0043067 | 101 | 0.016 | |
| autophagy | GO:0006914 | 4 | 0.016 | |
| developmental growth | GO:0048589 | 166 | 0.016 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 3 | 0.016 | |
| regulation of protein import into nucleus | GO:0042306 | 2 | 0.016 | |
| peptidyl threonine phosphorylation | GO:0018107 | 1 | 0.016 | |
| reciprocal meiotic recombination | GO:0007131 | 1 | 0.016 | |
| synaptic growth at neuromuscular junction | GO:0051124 | 2 | 0.016 | |
| spindle assembly | GO:0051225 | 2 | 0.016 | |
| regulation of glucose transport | GO:0010827 | 1 | 0.016 | |
| peptidyl lysine dimethylation | GO:0018027 | 1 | 0.015 | |
| protein complex disassembly | GO:0043241 | 1 | 0.015 | |
| regulation of multicellular organismal process | GO:0051239 | 277 | 0.015 | |
| hemopoiesis | GO:0030097 | 183 | 0.015 | |
| regulation of leukocyte mediated immunity | GO:0002703 | 1 | 0.015 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 114 | 0.015 | |
| cell substrate adhesion | GO:0031589 | 4 | 0.015 | |
| dna methylation | GO:0006306 | 8 | 0.015 | |
| small gtpase mediated signal transduction | GO:0007264 | 8 | 0.015 | |
| rna stabilization | GO:0043489 | 4 | 0.015 | |
| cellular protein metabolic process | GO:0044267 | 129 | 0.015 | |
| cellular response to external stimulus | GO:0071496 | 2 | 0.015 | |
| double strand break repair | GO:0006302 | 3 | 0.015 | |
| regulation of synapse assembly | GO:0051963 | 3 | 0.015 | |
| phagocytosis | GO:0006909 | 3 | 0.014 | |
| regulation of signaling | GO:0023051 | 235 | 0.014 | |
| regulation of rna biosynthetic process | GO:2001141 | 213 | 0.014 | |
| anterior posterior pattern specification | GO:0009952 | 152 | 0.014 | |
| chromatin organization | GO:0006325 | 22 | 0.014 | |
| cellular response to dna damage stimulus | GO:0006974 | 24 | 0.014 | |
| production of molecular mediator of immune response | GO:0002440 | 2 | 0.014 | |
| cell death | GO:0008219 | 121 | 0.014 | |
| cellular localization | GO:0051641 | 97 | 0.014 | |
| cellular response to chemical stimulus | GO:0070887 | 157 | 0.014 | |
| positive regulation of metabolic process | GO:0009893 | 108 | 0.014 | |
| cilium morphogenesis | GO:0060271 | 85 | 0.013 | |
| response to corticosteroid | GO:0031960 | 1 | 0.013 | |
| response to monosaccharide | GO:0034284 | 3 | 0.013 | |
| nucleic acid templated transcription | GO:0097659 | 181 | 0.013 | |
| regulation of cytoplasmic transport | GO:1903649 | 4 | 0.013 | |
| rna polyadenylation | GO:0043631 | 2 | 0.013 | |
| cellular component morphogenesis | GO:0032989 | 336 | 0.013 | |
| nuclear transport | GO:0051169 | 4 | 0.013 | |
| dorsal ventral pattern formation | GO:0009953 | 125 | 0.013 | |
| response to carbohydrate | GO:0009743 | 3 | 0.013 | |
| regulation of cellular protein metabolic process | GO:0032268 | 52 | 0.013 | |
| cellular response to endogenous stimulus | GO:0071495 | 68 | 0.013 | |
| regulation of gene silencing | GO:0060968 | 1 | 0.013 | |
| mrna metabolic process | GO:0016071 | 20 | 0.013 | |
| nuclear migration | GO:0007097 | 3 | 0.013 | |
| cell cycle g2 m phase transition | GO:0044839 | 4 | 0.013 | |
| regulation of protein ubiquitination | GO:0031396 | 3 | 0.013 | |
| centrosome cycle | GO:0007098 | 1 | 0.013 | |
| cell cycle phase transition | GO:0044770 | 9 | 0.013 | |
| cell motility | GO:0048870 | 244 | 0.012 | |
| cellular response to extracellular stimulus | GO:0031668 | 2 | 0.012 | |
| dna metabolic process | GO:0006259 | 27 | 0.012 | |
| regulation of protein localization to nucleus | GO:1900180 | 2 | 0.012 | |
| regulation of dna methylation | GO:0044030 | 5 | 0.012 | |
| leukocyte proliferation | GO:0070661 | 1 | 0.012 | |
| chordate embryonic development | GO:0043009 | 271 | 0.012 | |
| cytoskeleton organization | GO:0007010 | 96 | 0.012 | |
| regulation of rna metabolic process | GO:0051252 | 224 | 0.012 | |
| cellular response to oxygen levels | GO:0071453 | 1 | 0.012 | |
| gene silencing | GO:0016458 | 4 | 0.012 | |
| meiotic nuclear division | GO:0007126 | 4 | 0.012 | |
| positive regulation of leukocyte mediated immunity | GO:0002705 | 1 | 0.012 | |
| protein targeting to nucleus | GO:0044744 | 3 | 0.012 | |
| ovulation cycle process | GO:0022602 | 2 | 0.012 | |
| negative regulation of signal transduction | GO:0009968 | 94 | 0.012 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 48 | 0.012 | |
| mrna 3 end processing | GO:0031124 | 2 | 0.012 | |
| transport | GO:0006810 | 220 | 0.012 | |
| myeloid cell differentiation | GO:0030099 | 86 | 0.012 | |
| regulation of cell cycle | GO:0051726 | 52 | 0.012 | |
| response to nutrient | GO:0007584 | 3 | 0.011 | |
| lipid storage | GO:0019915 | 1 | 0.011 | |
| cellular response to starvation | GO:0009267 | 1 | 0.011 | |
| establishment of rna localization | GO:0051236 | 3 | 0.011 | |
| cell cycle arrest | GO:0007050 | 1 | 0.011 | |
| primary neural tube formation | GO:0014020 | 1 | 0.011 | |
| regulation of meiotic cell cycle | GO:0051445 | 1 | 0.011 | |
| response to nitrogen compound | GO:1901698 | 19 | 0.011 | |
| negative regulation of dna replication | GO:0008156 | 2 | 0.011 | |
| negative regulation of histone modification | GO:0031057 | 1 | 0.011 | |
| regulation of carbohydrate metabolic process | GO:0006109 | 4 | 0.011 | |
| regulation of synapse organization | GO:0050807 | 3 | 0.011 | |
| response to glucocorticoid | GO:0051384 | 1 | 0.011 | |
| death | GO:0016265 | 121 | 0.011 | |
| positive regulation of carbohydrate metabolic process | GO:0045913 | 1 | 0.011 | |
| regulation of cell death | GO:0010941 | 103 | 0.011 | |
| centrosome duplication | GO:0051298 | 1 | 0.011 | |
| leukocyte mediated cytotoxicity | GO:0001909 | 1 | 0.011 | |
| immunoglobulin production | GO:0002377 | 1 | 0.011 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 1 | 0.011 | |
| regulation of stem cell proliferation | GO:0072091 | 2 | 0.011 | |
| erythrocyte differentiation | GO:0030218 | 54 | 0.011 | |
| multi organism reproductive process | GO:0044703 | 36 | 0.010 | |
| single organism localization | GO:1902578 | 225 | 0.010 | |
| digestive tract morphogenesis | GO:0048546 | 231 | 0.010 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 22 | 0.010 | |
| cellular carbohydrate metabolic process | GO:0044262 | 4 | 0.010 | |
| retina development in camera type eye | GO:0060041 | 146 | 0.010 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 107 | 0.010 | |
| hematopoietic stem cell migration | GO:0035701 | 4 | 0.010 | |
| regulation of dna templated transcription in response to stress | GO:0043620 | 0 | 0.010 | |
| reproductive process | GO:0022414 | 40 | 0.010 | |
| homeostasis of number of cells within a tissue | GO:0048873 | 4 | 0.010 | |
