Danio rerio

0 known processes

pdlim5

PDZ and LIM domain 5

(Aliases: zgc:91978)

pdlim5 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
myofibril assemblyGO:0030239480.922
Fly
response to copper ionGO:0046688130.724
regulation of cell matrix adhesionGO:000195210.716
Fly
actomyosin structure organizationGO:0031032530.648
Fly
single organism organelle organizationGO:19025891990.585
Fly
actin filament based processGO:0030029640.561
Fly
organelle assemblyGO:00709251100.547
Fly
cellular component assembly involved in morphogenesisGO:00109271070.512
Fly
striated muscle cell developmentGO:00550021080.501
Fly
cellular component assemblyGO:00226071700.402
Rat Fly
heart developmentGO:00075073130.398
Zebrafish
muscle cell differentiationGO:00426921390.386
Fly
negative regulation of axon extension involved in axon guidanceGO:004884310.374
cellular component morphogenesisGO:00329893360.336
Rat Fly
anterior posterior pattern specificationGO:00099521520.303
Zebrafish
organelle organizationGO:00069962270.301
Fly
cell projection organizationGO:00300302840.297
Rat
striated muscle cell differentiationGO:00511461290.288
Fly
cytoskeleton organizationGO:0007010960.279
Fly
generation of neuronsGO:00486993850.276
Rat
muscle cell developmentGO:00550011150.260
Fly
segmentationGO:0035282970.252
Zebrafish
regulation of cell substrate adhesionGO:001081010.234
Fly
actin cytoskeleton organizationGO:0030036630.180
Fly
axonogenesisGO:00074091520.164
morphogenesis of an epitheliumGO:00020093330.162
regulation of nucleotide catabolic processGO:003081120.141
somitogenesisGO:0001756870.140
Zebrafish
regulation of biological qualityGO:00650082630.128
Rat
regulation of gene expressionGO:00104682650.127
modification dependent protein catabolic processGO:001994130.122
regulation of collateral sprouting in absence of injuryGO:004869640.118
cellular component biogenesisGO:00440851780.109
Rat Fly
agingGO:000756820.106
compound eye developmentGO:004874920.103
axon developmentGO:00615641660.102
blood vessel developmentGO:00015682460.099
sensory organ developmentGO:00074233930.096
purine nucleoside monophosphate catabolic processGO:000912840.094
regulation of axonogenesisGO:0050770320.093
embryo development ending in birth or egg hatchingGO:00097922710.092
Zebrafish
actin filament organizationGO:0007015150.091
regulation of multicellular organismal developmentGO:20000262230.088
Rat
chordate embryonic developmentGO:00430092710.088
Zebrafish
somite developmentGO:0061053960.087
Zebrafish
cytokinesisGO:000091030.082
small molecule metabolic processGO:0044281770.079
purine ribonucleoside monophosphate catabolic processGO:000916940.079
regulation of macromolecule metabolic processGO:00602553170.077
skeletal muscle organ developmentGO:0060538780.077
synaptic growth at neuromuscular junctionGO:005112420.076
positive regulation of cytoskeleton organizationGO:005149530.076
regulation of cell morphogenesis involved in differentiationGO:0010769380.075
Rat
regulation of purine nucleotide catabolic processGO:003312120.072
ribonucleoside monophosphate catabolic processGO:000915840.071
cardiac atrium developmentGO:000323040.069
cell morphogenesisGO:00009022890.065
Rat
regulation of anatomical structure morphogenesisGO:00226031300.064
Rat
response to transition metal nanoparticleGO:1990267280.062
neuron developmentGO:00486662620.062
Rat
establishment of localizationGO:00512342440.061
regulation of protein modification by small protein conjugation or removalGO:190332030.060
vasculature developmentGO:00019442780.059
response to chemicalGO:00422213200.057
ventricular cardiac muscle tissue developmentGO:000322930.057
regulation of nucleoside metabolic processGO:000911820.055
positive regulation of cellular component biogenesisGO:004408930.055
nucleoside monophosphate catabolic processGO:000912540.054
regulation of protein ubiquitinationGO:003139630.054
regulation of cell morphogenesisGO:0022604420.054
Rat
response to stressGO:00069502630.053
sarcomere organizationGO:0045214260.053
cell matrix adhesionGO:000716040.053
Fly
regulation of multicellular organismal processGO:00512392770.052
Rat
head developmentGO:00603223030.052
regionalizationGO:00030022740.051
Zebrafish
cellular macromolecule metabolic processGO:00442603910.051
response to external stimulusGO:00096052640.051
cellular amino acid metabolic processGO:000652070.051
response to inorganic substanceGO:0010035380.051
regulation of neuron projection developmentGO:0010975400.051
Rat
cell morphogenesis involved in neuron differentiationGO:00486671630.050
Rat
nitrogen compound metabolic processGO:00068073190.048
neuron projection developmentGO:00311751800.048
Rat
cellular component movementGO:00069283350.048
collateral sprouting in absence of injuryGO:004866940.048
neuron differentiationGO:00301823530.047
Rat
response to external biotic stimulusGO:0043207970.045
golgi vesicle transportGO:004819330.044
dendrite guidanceGO:007098300.044
cell death in response to oxidative stressGO:003647320.043
neural plate anterior posterior regionalizationGO:002199980.043
cell projection morphogenesisGO:00488582440.042
Rat
regulation of cellular amino acid metabolic processGO:000652100.041
striated muscle tissue developmentGO:00147061100.040
positive regulation of catabolic processGO:000989640.040
cardiac atrium morphogenesisGO:000320920.039
central nervous system myelinationGO:002201020.039
circulatory system processGO:0003013870.038
developmental growthGO:00485891660.038
positive regulation of cellular catabolic processGO:003133130.037
locomotory behaviorGO:0007626340.036
regulation of response to stimulusGO:00485832690.036
cellular protein metabolic processGO:00442671290.036
heart loopingGO:0001947940.036
skeletal muscle thin filament assemblyGO:003024040.036
specification of symmetryGO:00097992040.035
central nervous system developmentGO:00074173870.035
single organism localizationGO:19025782250.035
embryonic heart tube morphogenesisGO:00031431080.034
response to other organismGO:0051707970.034
regulation of heart growthGO:006042020.033
signal transductionGO:00071654550.033
post embryonic morphogenesisGO:000988640.033
positive regulation of axonogenesisGO:005077260.032
regulation of developmental processGO:00507932470.032
Rat
neuron projection morphogenesisGO:00488121610.031
Rat
axonal defasciculationGO:000741420.031
muscle fiber developmentGO:0048747520.030
regulation of skeletal muscle tissue developmentGO:004864140.030
cell morphogenesis involved in differentiationGO:00009041950.030
Rat
negative regulation of cellular processGO:00485232830.029
synaptic transmissionGO:0007268350.029
Rat
protein phosphorylationGO:0006468470.029
immune system processGO:00023762410.028
biosynthetic processGO:00090582940.028
cell surface receptor signaling pathwayGO:00071663250.028
regulation of protein catabolic processGO:004217610.027
regulation of organ growthGO:004662030.027
synaptic transmission cholinergicGO:000727140.027
heart morphogenesisGO:00030071560.027
phosphorus metabolic processGO:00067931090.027
positive regulation of peptidyl tyrosine phosphorylationGO:005073110.026
cell growthGO:0016049570.026
single organism transportGO:00447652060.026
locomotionGO:00400113130.026
primitive hemopoiesisGO:0060215270.026
regulation of cell developmentGO:00602841000.026
Rat
larval developmentGO:000216420.026
regulation of cellular component organizationGO:0051128860.025
Rat
regulation of cellular amine metabolic processGO:003323800.025
proteasomal protein catabolic processGO:001049820.025
regulation of neuron differentiationGO:0045664560.024
Rat
protein complex subunit organizationGO:0071822460.024
embryonic organ morphogenesisGO:00485622740.024
amine metabolic processGO:000930820.024
positive regulation of cellular amino acid metabolic processGO:004576400.024
blood vessel morphogenesisGO:00485142160.023
regulation of rna biosynthetic processGO:20011412130.023
modification dependent macromolecule catabolic processGO:004363230.023
cellular biosynthetic processGO:00442492860.023
regulation of cytokine productionGO:000181730.023
regulation of cellular metabolic processGO:00313233200.023
regulation of cell differentiationGO:00455951420.022
Rat
rna biosynthetic processGO:00327741810.022
regulation of rna metabolic processGO:00512522240.021
cell motilityGO:00488702440.021
organic cyclic compound biosynthetic processGO:19013622230.020
mitochondrion organizationGO:000700540.020
brain developmentGO:00074202930.020
negative regulation of catalytic activityGO:0043086210.020
enzyme linked receptor protein signaling pathwayGO:00071671060.019
developmental growth involved in morphogenesisGO:0060560860.019
regulation of mitochondrion organizationGO:001082110.019
cytoskeleton dependent cytokinesisGO:006164030.019
cellular amine metabolic processGO:004410620.019
central nervous system neuron differentiationGO:0021953740.019
intracellular signal transductionGO:0035556850.019
regulation of actin cytoskeleton organizationGO:003295680.018
tissue remodelingGO:004877140.018
directional locomotionGO:003305810.018
protein modification processGO:00362111000.018
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.018
response to biotic stimulusGO:0009607970.018
heterocycle metabolic processGO:00464832900.018
ventricular cardiac muscle tissue morphogenesisGO:005501020.018
response to alkaloidGO:004327920.018
cell substrate junction assemblyGO:000704420.018
embryonic pattern specificationGO:0009880440.018
heterocycle biosynthetic processGO:00181302150.018
purine containing compound metabolic processGO:0072521290.017
carbon dioxide transportGO:001567030.017
ubiquitin dependent protein catabolic processGO:000651130.017
anterior commissure morphogenesisGO:002196030.017
endocrine pancreas developmentGO:0031018270.017
adult behaviorGO:003053420.017
eye developmentGO:00016542770.017
cytokinetic processGO:003250620.017
skeletal myofibril assemblyGO:001486670.017
response to metal ionGO:0010038340.016
cellular ketone metabolic processGO:0042180110.016
regulation of extent of cell growthGO:0061387290.016
positive regulation of axon extensionGO:004577350.016
regulation of cell sizeGO:0008361290.016
central nervous system neuron developmentGO:0021954290.016
organonitrogen compound metabolic processGO:1901564740.016
voluntary skeletal muscle contractionGO:000301040.016
twitch skeletal muscle contractionGO:001472140.016
defense responseGO:0006952470.016
notochord developmentGO:0030903540.015
embryonic heart tube developmentGO:00350501330.015
oxoacid metabolic processGO:0043436310.015
protein metabolic processGO:00195381830.015
heart growthGO:006041970.015
negative regulation of nervous system developmentGO:0051961220.015
regulation of developmental growthGO:0048638380.015
organic substance biosynthetic processGO:19015762890.015
cell substrate adhesionGO:003158940.015
Fly
cardiocyte differentiationGO:0035051440.015
regulation of phGO:000688530.014
sodium ion transmembrane transportGO:0035725210.014
neural crest cell differentiationGO:0014033720.014
axonal fasciculationGO:0007413110.014
epithelial tube morphogenesisGO:00605621480.014
cell cycleGO:0007049930.014
cellular aromatic compound metabolic processGO:00067252950.014
regulation of primary metabolic processGO:00800903110.014
lateral line system developmentGO:0048925760.014
negative regulation of defense responseGO:003134820.014
biological adhesionGO:0022610400.014
Fly
intrinsic apoptotic signaling pathway in response to oxidative stressGO:000863120.014
negative regulation of biological processGO:00485193040.014
single organism metabolic processGO:00447102170.014
organic cyclic compound metabolic processGO:19013603010.014
system processGO:00030081850.014
regulation of actin filament based processGO:003297090.014
regulation of mesenchymal cell proliferationGO:001046410.013
hepatocyte proliferationGO:007257420.013
cellular nitrogen compound metabolic processGO:00346412900.013
muscle organ developmentGO:00075171010.013
protein stabilizationGO:005082120.013
cell part morphogenesisGO:00329902460.013
Rat
heart valve formationGO:000318840.013
positive regulation of cell projection organizationGO:003134690.013
carbohydrate derivative metabolic processGO:1901135610.013
mitotic dna integrity checkpointGO:004477440.012
g2 m transition of mitotic cell cycleGO:000008640.012
atp catabolic processGO:000620040.012
feeding behaviorGO:000763150.012
cardiac chamber morphogenesisGO:0003206120.012
cellular nitrogen compound biosynthetic processGO:00442712180.012
somatic muscle developmentGO:000752540.012
cell cell signalingGO:0007267520.011
Rat
neuron projection extensionGO:1990138450.011
neurological system processGO:0050877620.011
aromatic compound biosynthetic processGO:00194382170.011
regulation of protein bindingGO:004339330.011
regulation of multicellular organism growthGO:004001440.011
cell projection assemblyGO:0030031640.011
neuromast developmentGO:0048884460.011
negative regulation of axon guidanceGO:190266810.011
hepatic duct developmentGO:006101120.011
response to oxygen containing compoundGO:1901700550.011
mitotic g2 m transition checkpointGO:004481830.011
single organism carbohydrate metabolic processGO:0044723120.011
negative regulation of cell developmentGO:0010721260.011
extrinsic apoptotic signaling pathwayGO:009719130.011
negative regulation of cytokine productionGO:000181810.011
regulation of cytoskeleton organizationGO:0051493110.011
behaviorGO:0007610740.010
lamellipodium assemblyGO:003003210.010
cellular response to chemical stimulusGO:00708871570.010
extrinsic apoptotic signaling pathway in absence of ligandGO:009719210.010
rna metabolic processGO:00160702190.010
spinal cord developmentGO:0021510460.010
regulation of bindingGO:005109830.010
cellular carbohydrate metabolic processGO:004426240.010
regulation of neuron migrationGO:200122220.010
neuroblast proliferationGO:000740520.010
skeletal system developmentGO:00015011810.010
microtubule organizing center organizationGO:003102310.010
growthGO:00400071740.010
angiogenesisGO:00015251580.010

pdlim5 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.199
musculoskeletal system diseaseDOID:1700.107
bone diseaseDOID:008000100.022
connective tissue diseaseDOID:6500.022
bone remodeling diseaseDOID:008000500.022
myopathyDOID:42300.021
muscular diseaseDOID:008000000.021
muscle tissue diseaseDOID:6600.021
nervous system diseaseDOID:86300.013