Danio rerio

0 known processes

h3f3d

H3 histone, family 3D

(Aliases: zgc:56418,MGC56418,His3.3B)

h3f3d biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
agingGO:000756820.161
Worm
regulation of nitrogen compound metabolic processGO:00511712510.124
regulation of macromolecule metabolic processGO:00602553170.117
generation of neuronsGO:00486993850.114
regulation of cellular macromolecule biosynthetic processGO:20001122220.110
dorsal ventral pattern formationGO:00099531250.103
regulation of mrna processingGO:005068430.102
regulation of nucleobase containing compound metabolic processGO:00192192500.096
regulation of primary metabolic processGO:00800903110.094
response to external stimulusGO:00096052640.089
cellular macromolecule biosynthetic processGO:00346452240.089
nucleobase containing compound metabolic processGO:00061392740.088
regulation of macromolecule biosynthetic processGO:00105562250.080
regulation of rna metabolic processGO:00512522240.078
cellular macromolecule metabolic processGO:00442603910.076
regionalizationGO:00030022740.074
ubiquitin dependent protein catabolic processGO:000651130.074
organic cyclic compound metabolic processGO:19013603010.074
cellular biosynthetic processGO:00442492860.074
regulation of metabolic processGO:00192223590.073
cellular nitrogen compound biosynthetic processGO:00442712180.072
locomotor rhythmGO:004547530.072
pole plasm assemblyGO:000731540.069
regulation of mrna splicing via spliceosomeGO:004802430.069
response to chemicalGO:00422213200.067
heterocycle biosynthetic processGO:00181302150.066
regulation of circadian rhythmGO:004275240.065
sensory organ developmentGO:00074233930.065
biosynthetic processGO:00090582940.065
regulation of response to stimulusGO:00485832690.064
modification dependent macromolecule catabolic processGO:004363230.063
cell morphogenesisGO:00009022890.063
Fly
cellular component morphogenesisGO:00329893360.061
Fly
maintenance of locationGO:005123540.057
regulation of gene expressionGO:00104682650.057
transcription dna templatedGO:00063511810.057
nitrogen compound metabolic processGO:00068073190.056
negative regulation of biological processGO:00485193040.056
programmed cell deathGO:00125011190.055
cell morphogenesis involved in neuron differentiationGO:00486671630.054
organic cyclic compound biosynthetic processGO:19013622230.053
nucleocytoplasmic transportGO:000691340.053
establishment of protein localization to organelleGO:007259440.053
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.052
cell surface receptor signaling pathwayGO:00071663250.052
entrainment of circadian clockGO:000964920.050
regulation of cellular biosynthetic processGO:00313262450.050
rna metabolic processGO:00160702190.049
nucleic acid metabolic processGO:00903042440.049
intracellular mrna localizationGO:000829810.049
positive regulation of cellular processGO:00485222010.048
regulation of nucleocytoplasmic transportGO:004682220.048
eye developmentGO:00016542770.048
regulation of nucleic acid templated transcriptionGO:19035062130.046
gene expressionGO:00104672520.046
rna localizationGO:000640340.046
nuclear transportGO:005116940.045
morphogenesis of an epitheliumGO:00020093330.045
regulation of cytoplasmic transportGO:190364940.045
cellular aromatic compound metabolic processGO:00067252950.045
phagocytosisGO:000690930.044
aromatic compound biosynthetic processGO:00194382170.044
cellular protein catabolic processGO:004425740.043
regulation of transcription dna templatedGO:00063552130.043
macromolecule biosynthetic processGO:00090592270.043
response to abiotic stimulusGO:00096281220.043
nucleobase containing compound biosynthetic processGO:00346542050.043
cell deathGO:00082191210.043
positive regulation of transportGO:005105020.043
cell part morphogenesisGO:00329902460.043
determination of bilateral symmetryGO:00098552040.042
organic substance biosynthetic processGO:19015762890.042
positive regulation of cellular component biogenesisGO:004408930.042
signal transductionGO:00071654550.042
nuclear importGO:005117030.042
lateral inhibitionGO:004633110.041
response to organic substanceGO:00100331530.041
stem cell maintenanceGO:001982740.041
negative regulation of cellular processGO:00485232830.040
protein localization to nucleusGO:003450430.040
apoptotic processGO:00069151160.039
protein targeting to nucleusGO:004474430.039
deathGO:00162651210.038
protein import into nucleusGO:000660630.037
regulation of protein modification by small protein conjugation or removalGO:190332030.037
specification of symmetryGO:00097992040.037
single organism nuclear importGO:190259330.037
neuron differentiationGO:00301823530.036
neuron developmentGO:00486662620.036
adult behaviorGO:003053420.035
positive regulation of cell cycleGO:004578730.035
neuron projection developmentGO:00311751800.035
rna biosynthetic processGO:00327741810.035
autophagyGO:000691440.035
transportGO:00068102200.034
protein metabolic processGO:00195381830.034
female gonad developmentGO:000858540.034
regulation of rna biosynthetic processGO:20011412130.034
oocyte anterior posterior axis specificationGO:000731440.033
alternative mrna splicing via spliceosomeGO:000038010.033
regulation of multicellular organismal developmentGO:20000262230.032
amine metabolic processGO:000930820.032
cellular nitrogen compound metabolic processGO:00346412900.032
compound eye developmentGO:004874920.031
regulation of i kappab kinase nf kappab signalingGO:004312240.031
positive regulation of metabolic processGO:00098931080.031
regulation of biosynthetic processGO:00098892500.031
cytoplasm organizationGO:000702840.031
heart developmentGO:00075073130.031
regulation of alternative mrna splicing via spliceosomeGO:000038110.031
tube morphogenesisGO:00352393490.031
regulation of signalingGO:00230512350.030
response to drugGO:004249330.030
protein importGO:001703830.030
regulation of bindingGO:005109830.030
regulation of protein transportGO:005122330.030
regulation of apoptotic processGO:0042981980.030
regulation of intracellular protein transportGO:003315730.030
positive regulation of nitrogen compound metabolic processGO:0051173690.029
regulation of protein catabolic processGO:004217610.029
regulation of stem cell differentiationGO:200073640.029
cellular carbohydrate metabolic processGO:004426240.029
regulation of protein localization to nucleusGO:190018020.029
cell agingGO:000756920.029
maternal determination of anterior posterior axis embryoGO:000835840.029
anterior posterior pattern specificationGO:00099521520.029
cellular response to external stimulusGO:007149620.029
cell projection organizationGO:00300302840.028
larval developmentGO:000216420.028
Worm
locomotionGO:00400113130.028
single organism localizationGO:19025782250.028
regulation of multicellular organismal processGO:00512392770.027
regulation of cell deathGO:00109411030.027
regulation of cellular amine metabolic processGO:003323800.027
cell projection morphogenesisGO:00488582440.027
mitotic nuclear divisionGO:0007067180.026
regulation of protein targetingGO:190353320.026
regulation of synapse organizationGO:005080730.026
striated muscle cell developmentGO:00550021080.026
vasculature developmentGO:00019442780.026
regulation of cellular metabolic processGO:00313233200.026
i kappab kinase nf kappab signalingGO:000724940.026
regulation of protein import into nucleusGO:004230620.026
circadian rhythmGO:0007623190.025
regulation of programmed cell deathGO:00430671010.025
rhythmic processGO:0048511210.025
embryonic organ developmentGO:00485683810.025
central nervous system developmentGO:00074173870.025
positive regulation of catabolic processGO:000989640.024
camera type eye developmentGO:00430102220.024
negative regulation of rna splicingGO:003311910.024
cellular component disassemblyGO:002241110.024
macromolecule modificationGO:00434121110.024
dna templated transcription elongationGO:000635430.024
response to stressGO:00069502630.024
establishment of localizationGO:00512342440.024
immune system processGO:00023762410.023
regulation of cell differentiationGO:00455951420.023
single organism metabolic processGO:00447102170.023
regulation of establishment of protein localizationGO:007020140.023
muscle structure developmentGO:00610611960.023
mitotic cell cycle processGO:1903047480.023
segmentationGO:0035282970.022
regulation of cell communicationGO:00106462320.022
negative regulation of gene expressionGO:0010629650.022
negative regulation of apoptotic processGO:0043066550.022
apoptotic process involved in developmentGO:190274220.022
nucleic acid templated transcriptionGO:00976591810.022
golgi vesicle transportGO:004819330.022
single organism organelle organizationGO:19025891990.022
positive regulation of cytokine productionGO:000181920.022
cellular response to organic cyclic compoundGO:0071407380.022
sequestering of metal ionGO:005123830.022
axon developmentGO:00615641660.022
spermatid differentiationGO:004851520.022
proteolysis involved in cellular protein catabolic processGO:005160330.022
response to uvGO:000941130.022
regulation of signal transductionGO:00099662250.022
regulation of cellular amino acid metabolic processGO:000652100.022
regulation of peptidyl tyrosine phosphorylationGO:005073010.022
system processGO:00030081850.021
negative regulation of catabolic processGO:000989530.021
brain developmentGO:00074202930.021
head developmentGO:00603223030.021
single organism cellular localizationGO:1902580460.021
positive regulation of gene expressionGO:0010628710.021
heart morphogenesisGO:00030071560.021
blood vessel developmentGO:00015682460.021
cellular response to nutrient levelsGO:003166920.021
spermatid developmentGO:000728620.021
protein complex disassemblyGO:004324110.021
heterocycle metabolic processGO:00464832900.020
regulation of meiotic cell cycleGO:005144510.020
regulation of cellular ketone metabolic processGO:001056570.020
stem cell differentiationGO:00488631170.020
er to golgi vesicle mediated transportGO:000688810.020
extrinsic apoptotic signaling pathwayGO:009719130.020
cellular response to organic substanceGO:00713101050.020
cellular response to extracellular stimulusGO:003166820.020
protein secretionGO:000930610.020
regulation of synapse assemblyGO:005196330.020
phosphorus metabolic processGO:00067931090.020
organelle organizationGO:00069962270.019
Fly
muscle cell developmentGO:00550011150.019
single organism transportGO:00447652060.019
cytokinesisGO:000091030.019
membrane invaginationGO:001032410.019
phagocytosis engulfmentGO:000691110.019
enzyme linked receptor protein signaling pathwayGO:00071671060.019
negative regulation of nucleobase containing compound metabolic processGO:0045934590.019
proteolysisGO:0006508380.019
regulation of reproductive processGO:200024140.019
regulation of cell shapeGO:000836010.019
Fly
cellular amine metabolic processGO:004410620.019
growthGO:00400071740.019
cellular ketone metabolic processGO:0042180110.018
epithelial tube morphogenesisGO:00605621480.018
cellular protein metabolic processGO:00442671290.018
striated muscle tissue developmentGO:00147061100.018
regulation of muscle contractionGO:000693730.018
regulation of wnt signaling pathwayGO:0030111530.018
regulation of localizationGO:00328791040.018
regulation of protein ubiquitinationGO:003139630.018
cellular component movementGO:00069283350.018
regulation of cellular protein metabolic processGO:0032268520.018
determination of left right symmetryGO:00073681790.018
synaptic vesicle transportGO:004848910.018
regulation of carbohydrate metabolic processGO:000610940.018
positive regulation of cellular catabolic processGO:003133130.017
regulation of multicellular organism growthGO:004001440.017
meiotic nuclear divisionGO:000712640.017
Fly
negative regulation of programmed cell deathGO:0043069580.017
positive regulation of biological processGO:00485182530.017
nuclear exportGO:005116810.017
negative regulation of nucleic acid templated transcriptionGO:1903507450.017
regulation of cellular carbohydrate metabolic processGO:001067540.017
regulation of cytokine productionGO:000181730.017
macromolecular complex disassemblyGO:003298410.017
cellular localizationGO:0051641970.017
protein k48 linked ubiquitinationGO:007093610.017
regulation of protein bindingGO:004339330.017
small molecule metabolic processGO:0044281770.017
mitochondrion organizationGO:000700540.016
ribosomal small subunit biogenesisGO:004227420.016
negative regulation of metabolic processGO:0009892860.016
response to woundingGO:00096111160.016
guanosine containing compound metabolic processGO:190106840.016
response to coldGO:000940940.016
lipid storageGO:001991510.016
energy reserve metabolic processGO:000611220.016
response to light stimulusGO:0009416460.016
cell matrix adhesionGO:000716040.016
protein modification processGO:00362111000.016
organelle assemblyGO:00709251100.016
cellular response to chemical stimulusGO:00708871570.016
regulation of smoothened signaling pathwayGO:0008589180.016
positive regulation of histone modificationGO:003105810.016
regulation of proteolysis involved in cellular protein catabolic processGO:190305010.016
organic acid metabolic processGO:0006082310.016
sex determinationGO:000753010.016
development of primary female sexual characteristicsGO:004654540.016
cell substrate adhesionGO:003158940.016
neuron projection morphogenesisGO:00488121610.016
positive regulation of muscle cell differentiationGO:005114910.016
protein complex localizationGO:003150310.016
gtp catabolic processGO:000618420.016
ribonucleoside monophosphate catabolic processGO:000915840.015
regulation of developmental processGO:00507932470.015
Fly
positive regulation of apoptotic signaling pathwayGO:200123510.015
negative regulation of cellular metabolic processGO:0031324770.015
regulation of microtubule cytoskeleton organizationGO:007050730.015
regenerationGO:0031099910.015
multicellular organism growthGO:003526440.015
positive regulation of cellular biosynthetic processGO:0031328680.015
protein acylationGO:004354330.015
cellular protein modification processGO:00064641000.015
regulation of biological qualityGO:00650082630.015
Fly
cellular response to starvationGO:000926710.015
positive regulation of chromatin modificationGO:190331010.015
regulation of epithelial cell proliferationGO:005067830.015
mitotic cell cycleGO:0000278640.015
blood vessel morphogenesisGO:00485142160.015
regulation of cell projection assemblyGO:006049140.015
regulation of cell activationGO:005086510.015
cell morphogenesis involved in differentiationGO:00009041950.015
meiosis iGO:000712710.014
regulation of protein metabolic processGO:0051246560.014
circadian regulation of gene expressionGO:003292280.014
protein dephosphorylationGO:000647030.014
macromolecule localizationGO:0033036540.014
peptidyl serine phosphorylationGO:001810510.014
carbohydrate biosynthetic processGO:001605110.014
developmental programmed cell deathGO:001062340.014
single organism behaviorGO:0044708240.014
negative regulation of myeloid cell differentiationGO:004563810.014
axis specificationGO:0009798430.014
developmental growthGO:00485891660.014
signal transduction in absence of ligandGO:003803410.014
axonogenesisGO:00074091520.014
carboxylic acid metabolic processGO:0019752220.014
nitric oxide biosynthetic processGO:000680920.014
negative regulation of nitrogen compound metabolic processGO:0051172590.014
positive regulation of epithelial cell proliferationGO:005067910.014
fertilizationGO:000956630.014
positive regulation of map kinase activityGO:004340630.014
female sex differentiationGO:004666040.014
purine nucleoside monophosphate catabolic processGO:000912840.014
oxoacid metabolic processGO:0043436310.014
negative regulation of neuron projection regenerationGO:007057140.014
negative regulation of nucleocytoplasmic transportGO:004682320.013
regulation of cellular response to oxidative stressGO:190040720.013
multi organism processGO:00517041340.013
regulation of cellular protein catabolic processGO:190336210.013
positive regulation of cellular amine metabolic processGO:003324000.013
phosphate containing compound metabolic processGO:00067961080.013
cell substrate junction assemblyGO:000704420.013
regulation of protein complex disassemblyGO:004324410.013
negative regulation of rna metabolic processGO:0051253480.013
response to organic cyclic compoundGO:0014070510.013
rna stabilizationGO:004348940.013
negative regulation of biosynthetic processGO:0009890550.013
nuclear migrationGO:000709730.013
regulation of gene expression epigeneticGO:0040029110.013
wnt signaling pathwayGO:0016055800.013
negative regulation of ras protein signal transductionGO:004658010.013
regulation of neuron projection developmentGO:0010975400.013
peptidyl serine modificationGO:001820920.013
regulation of synaptic growth at neuromuscular junctionGO:000858210.013
intracellular signal transductionGO:0035556850.013
regulation of chromosome segregationGO:005198310.013
negative regulation of cellular catabolic processGO:003133030.013
response to corticosteroidGO:003196010.013
purine ribonucleoside monophosphate catabolic processGO:000916940.013
cell fate commitmentGO:0045165990.013
cellular response to stressGO:0033554620.013
microtubule organizing center organizationGO:003102310.013
regulation of wound healingGO:006104120.013
pharyngeal muscle developmentGO:004328240.013
regulation of nucleoside metabolic processGO:000911820.013
muscle organ developmentGO:00075171010.013
centrosome organizationGO:005129710.013
oocyte developmentGO:0048599140.013
cell death in response to oxidative stressGO:003647320.013
negative regulation of cellular macromolecule biosynthetic processGO:2000113480.012
synaptic growth at neuromuscular junctionGO:005112420.012
angiogenesisGO:00015251580.012
extrinsic apoptotic signaling pathway in absence of ligandGO:009719210.012
er nucleus signaling pathwayGO:000698420.012
stem cell proliferationGO:007208940.012
atp catabolic processGO:000620040.012
regulation of jak stat cascadeGO:004642530.012
sympathetic nervous system developmentGO:004848530.012
negative regulation of intracellular protein transportGO:009031730.012
cell cycle arrestGO:000705010.012
hemopoiesisGO:00300971830.012
positive regulation of cellular amino acid metabolic processGO:004576400.012
phosphorylationGO:0016310690.012
positive regulation of dna metabolic processGO:005105410.012
oocyte differentiationGO:0009994140.012
mononuclear cell proliferationGO:003294310.012
regulation of organ growthGO:004662030.012
positive regulation of protein complex assemblyGO:003133420.012
regulation of protein complex assemblyGO:004325430.012
positive regulation of cellular metabolic processGO:0031325940.012
reactive oxygen species biosynthetic processGO:190340910.012
regulation of nucleotide catabolic processGO:003081120.012
regulation of stem cell proliferationGO:007209120.012
female gamete generationGO:0007292140.012
positive regulation of canonical wnt signaling pathwayGO:009026340.012
posttranscriptional regulation of gene expressionGO:0010608140.012
negative regulation of reproductive processGO:200024230.012
proteasomal protein catabolic processGO:001049820.012
cortical actin cytoskeleton organizationGO:003086610.012
germ line stem cell maintenanceGO:003071820.012
dna metabolic processGO:0006259270.012
regulation of reactive oxygen species metabolic processGO:200037720.012
positive regulation of chromosome organizationGO:200125210.012
chordate embryonic developmentGO:00430092710.012
wound healingGO:0042060900.012
positive regulation of translationGO:004572710.012
regulation of receptor activityGO:001046920.012
transcription from rna polymerase ii promoterGO:0006366800.012
neuromuscular synaptic transmissionGO:000727420.012
taxisGO:00423301090.012
negative regulation of multicellular organismal processGO:0051241690.012
convergent extensionGO:00600261180.011
negative regulation of rna biosynthetic processGO:1902679450.011
positive regulation of i kappab kinase nf kappab signalingGO:004312330.011
epithelial cell differentiationGO:00308551160.011
positive regulation of macromolecule biosynthetic processGO:0010557590.011
positive regulation of peptidyl tyrosine phosphorylationGO:005073110.011
positive regulation of extrinsic apoptotic signaling pathwayGO:200123810.011
meiotic chromosome segregationGO:004513230.011
embryonic limb morphogenesisGO:003032620.011
retina development in camera type eyeGO:00600411460.011
positive regulation of macromolecule metabolic processGO:0010604930.011
regulation of response to cytokine stimulusGO:006075930.011
positive regulation of notch signaling pathwayGO:004574730.011
gastrulationGO:00073692080.011
histone deacetylationGO:001657520.011
regulation of sequestering of calcium ionGO:005128240.011
negative regulation of protein transportGO:005122430.011
circadian sleep wake cycle sleepGO:005080210.011
regulation of translational initiationGO:000644610.011
peptidyl lysine acetylationGO:001839420.011
regulation of circadian sleep wake cycle sleepGO:004518710.011
cognitionGO:005089010.011
cell motilityGO:00488702440.011
embryonic heart tube morphogenesisGO:00031431080.011
single fertilizationGO:000733830.011
regulation of organelle assemblyGO:190211540.011
symbiosis encompassing mutualism through parasitismGO:004440340.011
positive regulation of protein metabolic processGO:0051247230.011
negative regulation of synapse assemblyGO:005196420.011
cytoskeleton dependent cytokinesisGO:006164030.011
negative regulation of axon regenerationGO:004868140.011
protein localization to plasma membraneGO:007265910.011
developmental maturationGO:0021700340.011
positive regulation of cytosolic calcium ion concentrationGO:000720440.011
glial cell proliferationGO:001400940.011
negative regulation of signalingGO:0023057960.011
regulation of response to oxidative stressGO:190288220.011
circadian behaviorGO:004851250.011
guanosine containing compound catabolic processGO:190106920.011
gene silencing by rnaGO:003104740.011
regulation of transporter activityGO:003240920.011
pronuclear migrationGO:003504610.011
regulation of anatomical structure morphogenesisGO:00226031300.011
Fly
circadian sleep wake cycle processGO:002241020.011
negative regulation of macromolecule biosynthetic processGO:0010558480.011
negative regulation of multi organism processGO:004390130.011
positive regulation of nucleoside metabolic processGO:004597910.011
protein polyubiquitinationGO:000020940.010
entrainment of circadian clock by photoperiodGO:004315310.010
regulation of transcription from rna polymerase ii promoterGO:00063571140.010
establishment of synaptic vesicle localizationGO:009748010.010
cellular response to biotic stimulusGO:007121630.010
ion transmembrane transportGO:0034220910.010
regulation of inflammatory responseGO:005072720.010
cellular response to endogenous stimulusGO:0071495680.010
positive regulation of jnk cascadeGO:004633030.010
primary neural tube formationGO:001402010.010
tissue regenerationGO:0042246740.010
establishment of localization in cellGO:0051649770.010
negative regulation of translationGO:001714810.010
transcription elongation from rna polymerase ii promoterGO:000636830.010
muscle tissue developmentGO:00605371100.010
cytoskeleton organizationGO:0007010960.010
response to lipidGO:0033993600.010
synaptic vesicle endocytosisGO:004848810.010
positive regulation of nucleic acid templated transcriptionGO:1903508570.010
positive regulation of secretionGO:005104710.010
interspecies interaction between organismsGO:004441940.010
response to biotic stimulusGO:0009607970.010
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:000046210.010
regulation of lipid transportGO:003236840.010
positive regulation of embryonic developmentGO:004001930.010

h3f3d disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of cellular proliferationDOID:1456600.022
cancerDOID:16200.022
disease of anatomical entityDOID:700.019
nervous system diseaseDOID:86300.019
organ system cancerDOID:005068600.013
musculoskeletal system diseaseDOID:1700.012
disease of metabolismDOID:001466700.010
muscular diseaseDOID:008000000.010