| regulation of gene expression | GO:0010468 | 265 | 0.340 | |
| gene expression | GO:0010467 | 252 | 0.227 | |
| regulation of transcription dna templated | GO:0006355 | 213 | 0.203 | |
| regulation of metabolic process | GO:0019222 | 359 | 0.179 | |
| nucleic acid metabolic process | GO:0090304 | 244 | 0.155 | |
| negative regulation of biological process | GO:0048519 | 304 | 0.155 | |
| heterocycle biosynthetic process | GO:0018130 | 215 | 0.140 | |
| cellular nitrogen compound metabolic process | GO:0034641 | 290 | 0.133 | |
| cellular macromolecule biosynthetic process | GO:0034645 | 224 | 0.124 | |
| organic cyclic compound metabolic process | GO:1901360 | 301 | 0.123 | |
| cellular biosynthetic process | GO:0044249 | 286 | 0.123 | |
| meiotic nuclear division | GO:0007126 | 4 | 0.119 | |
| rna biosynthetic process | GO:0032774 | 181 | 0.114 | |
| biosynthetic process | GO:0009058 | 294 | 0.113 | |
| regulation of macromolecule metabolic process | GO:0060255 | 317 | 0.111 | |
| rna metabolic process | GO:0016070 | 219 | 0.111 | |
| cellular macromolecule metabolic process | GO:0044260 | 391 | 0.106 | |
| nitrogen compound metabolic process | GO:0006807 | 319 | 0.097 | |
| nucleobase containing compound biosynthetic process | GO:0034654 | 205 | 0.094 | |
| regulation of cellular macromolecule biosynthetic process | GO:2000112 | 222 | 0.093 | |
| cellular amine metabolic process | GO:0044106 | 2 | 0.085 | |
| sensory organ development | GO:0007423 | 393 | 0.084 | |
| optomotor response | GO:0071632 | 1 | 0.080 | |
| regulation of primary metabolic process | GO:0080090 | 311 | 0.079 | |
| regulation of macromolecule biosynthetic process | GO:0010556 | 225 | 0.077 | |
| negative regulation of gene expression | GO:0010629 | 65 | 0.073 | |
| heterocycle metabolic process | GO:0046483 | 290 | 0.069 | |
| cell fate commitment | GO:0045165 | 99 | 0.069 | |
| negative regulation of cellular process | GO:0048523 | 283 | 0.067 | |
| regulation of rna metabolic process | GO:0051252 | 224 | 0.066 | |
| regulation of biological quality | GO:0065008 | 263 | 0.065 | |
| adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | GO:0002460 | 4 | 0.065 | |
| mitotic cell cycle process | GO:1903047 | 48 | 0.062 | |
| aromatic compound biosynthetic process | GO:0019438 | 217 | 0.062 | |
| regulation of metal ion transport | GO:0010959 | 4 | 0.062 | |
| chordate embryonic development | GO:0043009 | 271 | 0.061 | |
| cellular aromatic compound metabolic process | GO:0006725 | 295 | 0.060 | |
| response to external stimulus | GO:0009605 | 264 | 0.060 | |
| retina development in camera type eye | GO:0060041 | 146 | 0.059 | |
| cation transport | GO:0006812 | 81 | 0.059 | |
| immunoglobulin mediated immune response | GO:0016064 | 3 | 0.058 | |
| transcription dna templated | GO:0006351 | 181 | 0.057 | |
| regulation of cellular biosynthetic process | GO:0031326 | 245 | 0.057 | |
| positive regulation of transport | GO:0051050 | 2 | 0.056 | |
| regulation of biosynthetic process | GO:0009889 | 250 | 0.055 | |
| negative regulation of cellular metabolic process | GO:0031324 | 77 | 0.055 | |
| regulation of rna biosynthetic process | GO:2001141 | 213 | 0.055 | |
| nucleic acid templated transcription | GO:0097659 | 181 | 0.053 | |
| regulation of cellular metabolic process | GO:0031323 | 320 | 0.052 | |
| meiotic cell cycle process | GO:1903046 | 3 | 0.050 | |
| larval development | GO:0002164 | 2 | 0.050 | |
| morphogenesis of an epithelium | GO:0002009 | 333 | 0.049 | |
| humoral immune response mediated by circulating immunoglobulin | GO:0002455 | 3 | 0.049 | |
| retina morphogenesis in camera type eye | GO:0060042 | 79 | 0.048 | |
| regulation of multicellular organismal process | GO:0051239 | 277 | 0.047 | |
| head development | GO:0060322 | 303 | 0.045 | |
| organic cyclic compound biosynthetic process | GO:1901362 | 223 | 0.045 | |
| positive regulation of immune effector process | GO:0002699 | 3 | 0.043 | |
| single organism localization | GO:1902578 | 225 | 0.042 | |
| epidermal cell fate specification | GO:0009957 | 4 | 0.042 | |
| regulation of cellular amine metabolic process | GO:0033238 | 0 | 0.042 | |
| brain development | GO:0007420 | 293 | 0.042 | |
| response to chemical | GO:0042221 | 320 | 0.042 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 213 | 0.042 | |
| macromolecule biosynthetic process | GO:0009059 | 227 | 0.042 | |
| regulation of cell activation | GO:0050865 | 1 | 0.042 | |
| eye morphogenesis | GO:0048592 | 144 | 0.041 | |
| cellular nitrogen compound biosynthetic process | GO:0044271 | 218 | 0.040 | |
| regulation of leukocyte mediated immunity | GO:0002703 | 1 | 0.040 | |
| central nervous system development | GO:0007417 | 387 | 0.040 | |
| leukocyte proliferation | GO:0070661 | 1 | 0.039 | |
| tube morphogenesis | GO:0035239 | 349 | 0.039 | |
| regulation of nitrogen compound metabolic process | GO:0051171 | 251 | 0.038 | |
| ovulation cycle process | GO:0022602 | 2 | 0.038 | |
| negative regulation of metabolic process | GO:0009892 | 86 | 0.038 | |
| epithelial tube morphogenesis | GO:0060562 | 148 | 0.037 | |
| organelle organization | GO:0006996 | 227 | 0.037 | |
| organic substance biosynthetic process | GO:1901576 | 289 | 0.037 | |
| cell death | GO:0008219 | 121 | 0.037 | |
| neuron differentiation | GO:0030182 | 353 | 0.037 | |
| regulation of programmed cell death | GO:0043067 | 101 | 0.037 | |
| inorganic cation transmembrane transport | GO:0098662 | 50 | 0.037 | |
| positive regulation of biological process | GO:0048518 | 253 | 0.037 | |
| aging | GO:0007568 | 2 | 0.036 | |
| single organism metabolic process | GO:0044710 | 217 | 0.035 | |
| ion transport | GO:0006811 | 114 | 0.035 | |
| mitochondrion organization | GO:0007005 | 4 | 0.034 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 271 | 0.034 | |
| cell fate specification | GO:0001708 | 68 | 0.034 | |
| eye development | GO:0001654 | 277 | 0.034 | |
| transmembrane transport | GO:0055085 | 120 | 0.033 | |
| oocyte maturation | GO:0001556 | 4 | 0.033 | |
| heart looping | GO:0001947 | 94 | 0.033 | |
| apoptotic process | GO:0006915 | 116 | 0.032 | |
| nucleobase containing compound metabolic process | GO:0006139 | 274 | 0.032 | |
| mitotic cell cycle | GO:0000278 | 64 | 0.031 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 76 | 0.031 | |
| calcium independent cell cell adhesion via plasma membrane cell adhesion molecules | GO:0016338 | 1 | 0.031 | |
| cellular response to chemical stimulus | GO:0070887 | 157 | 0.030 | |
| mononuclear cell proliferation | GO:0032943 | 1 | 0.029 | |
| spermatid development | GO:0007286 | 2 | 0.029 | |
| stem cell proliferation | GO:0072089 | 4 | 0.029 | |
| regulation of circadian rhythm | GO:0042752 | 4 | 0.028 | |
| stem cell division | GO:0017145 | 1 | 0.028 | |
| cell projection organization | GO:0030030 | 284 | 0.028 | |
| blood vessel development | GO:0001568 | 246 | 0.028 | |
| regulation of developmental process | GO:0050793 | 247 | 0.028 | |
| cellular response to nutrient levels | GO:0031669 | 2 | 0.028 | |
| signal transduction | GO:0007165 | 455 | 0.027 | |
| programmed cell death | GO:0012501 | 119 | 0.027 | |
| homeostatic process | GO:0042592 | 142 | 0.027 | |
| determination of heart left right asymmetry | GO:0061371 | 117 | 0.027 | |
| regulation of autophagy | GO:0010506 | 3 | 0.027 | |
| positive regulation of lymphocyte mediated immunity | GO:0002708 | 1 | 0.027 | |
| regulation of cellular carbohydrate metabolic process | GO:0010675 | 4 | 0.026 | |
| regulation of immune system process | GO:0002682 | 34 | 0.026 | |
| neuroblast proliferation | GO:0007405 | 2 | 0.026 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 59 | 0.026 | |
| skeletal system development | GO:0001501 | 181 | 0.026 | |
| positive regulation of cellular catabolic process | GO:0031331 | 3 | 0.025 | |
| camera type eye development | GO:0043010 | 222 | 0.025 | |
| b cell mediated immunity | GO:0019724 | 3 | 0.025 | |
| establishment of localization | GO:0051234 | 244 | 0.025 | |
| female gonad development | GO:0008585 | 4 | 0.025 | |
| lateral line system development | GO:0048925 | 76 | 0.025 | |
| epithelial cell differentiation | GO:0030855 | 116 | 0.025 | |
| death | GO:0016265 | 121 | 0.025 | |
| positive regulation of cell cycle | GO:0045787 | 3 | 0.024 | |
| cellular response to external stimulus | GO:0071496 | 2 | 0.024 | |
| dorsal ventral pattern formation | GO:0009953 | 125 | 0.023 | |
| system process | GO:0003008 | 185 | 0.023 | |
| mesenchymal cell differentiation | GO:0048762 | 87 | 0.023 | |
| regulation of apoptotic process | GO:0042981 | 98 | 0.023 | |
| lipid storage | GO:0019915 | 1 | 0.023 | |
| neuron development | GO:0048666 | 262 | 0.023 | |
| regulation of multicellular organism growth | GO:0040014 | 4 | 0.023 | |
| golgi vesicle transport | GO:0048193 | 3 | 0.023 | |
| negative regulation of mitosis | GO:0045839 | 3 | 0.023 | |
| circulatory system process | GO:0003013 | 87 | 0.023 | |
| epidermis development | GO:0008544 | 48 | 0.023 | |
| positive regulation of lipid metabolic process | GO:0045834 | 1 | 0.023 | |
| meiotic chromosome segregation | GO:0045132 | 3 | 0.022 | |
| calcium ion import | GO:0070509 | 4 | 0.022 | |
| regulation of reproductive process | GO:2000241 | 4 | 0.022 | |
| response to abiotic stimulus | GO:0009628 | 122 | 0.022 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 59 | 0.022 | |
| cell cycle | GO:0007049 | 93 | 0.022 | |
| male meiosis | GO:0007140 | 2 | 0.022 | |
| translational initiation | GO:0006413 | 3 | 0.022 | |
| metal ion transport | GO:0030001 | 58 | 0.021 | |
| sodium ion transport | GO:0006814 | 24 | 0.021 | |
| amine metabolic process | GO:0009308 | 2 | 0.021 | |
| response to stress | GO:0006950 | 263 | 0.021 | |
| astrocyte differentiation | GO:0048708 | 1 | 0.021 | |
| negative regulation of biosynthetic process | GO:0009890 | 55 | 0.021 | |
| camera type eye morphogenesis | GO:0048593 | 108 | 0.021 | |
| regulation of mitotic cell cycle | GO:0007346 | 25 | 0.021 | |
| embryonic organ morphogenesis | GO:0048562 | 274 | 0.020 | |
| regulation of immunoglobulin production | GO:0002637 | 1 | 0.020 | |
| regulation of sodium ion transport | GO:0002028 | 2 | 0.020 | |
| regulation of ph | GO:0006885 | 3 | 0.020 | |
| generation of neurons | GO:0048699 | 385 | 0.020 | |
| production of molecular mediator of immune response | GO:0002440 | 2 | 0.020 | |
| organelle fission | GO:0048285 | 23 | 0.020 | |
| immune system process | GO:0002376 | 241 | 0.019 | |
| positive regulation of cell activation | GO:0050867 | 1 | 0.019 | |
| cellular amide metabolic process | GO:0043603 | 4 | 0.019 | |
| response to nutrient | GO:0007584 | 3 | 0.019 | |
| cellular response to extracellular stimulus | GO:0031668 | 2 | 0.019 | |
| regulation of cellular protein metabolic process | GO:0032268 | 52 | 0.019 | |
| positive regulation of inflammatory response | GO:0050729 | 1 | 0.019 | |
| positive regulation of translation | GO:0045727 | 1 | 0.019 | |
| positive regulation of cellular carbohydrate metabolic process | GO:0010676 | 1 | 0.018 | |
| embryonic heart tube development | GO:0035050 | 133 | 0.018 | |
| positive regulation of catabolic process | GO:0009896 | 4 | 0.018 | |
| muscle organ development | GO:0007517 | 101 | 0.018 | |
| transport | GO:0006810 | 220 | 0.018 | |
| detection of chemical stimulus | GO:0009593 | 4 | 0.018 | |
| protein metabolic process | GO:0019538 | 183 | 0.017 | |
| fin morphogenesis | GO:0033334 | 53 | 0.017 | |
| apoptotic process involved in morphogenesis | GO:0060561 | 2 | 0.017 | |
| lymphocyte proliferation | GO:0046651 | 1 | 0.017 | |
| regulation of calcium ion transport | GO:0051924 | 2 | 0.017 | |
| response to glucocorticoid | GO:0051384 | 1 | 0.017 | |
| negative regulation of rna metabolic process | GO:0051253 | 48 | 0.017 | |
| striated muscle tissue development | GO:0014706 | 110 | 0.017 | |
| cellular protein metabolic process | GO:0044267 | 129 | 0.017 | |
| regulation of signaling | GO:0023051 | 235 | 0.017 | |
| appendage development | GO:0048736 | 80 | 0.017 | |
| regulation of binding | GO:0051098 | 3 | 0.017 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 80 | 0.016 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 93 | 0.016 | |
| response to antibiotic | GO:0046677 | 1 | 0.016 | |
| positive regulation of secretion by cell | GO:1903532 | 1 | 0.016 | |
| regulation of cytokine production | GO:0001817 | 3 | 0.016 | |
| regionalization | GO:0003002 | 274 | 0.016 | |
| ovarian follicle development | GO:0001541 | 2 | 0.016 | |
| female sex differentiation | GO:0046660 | 4 | 0.016 | |
| development of primary female sexual characteristics | GO:0046545 | 4 | 0.015 | |
| spemann organizer formation at the embryonic shield | GO:0060063 | 2 | 0.015 | |
| negative regulation of programmed cell death | GO:0043069 | 58 | 0.015 | |
| vasculature development | GO:0001944 | 278 | 0.015 | |
| positive regulation of secretion | GO:0051047 | 1 | 0.015 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 55 | 0.015 | |
| regulation of cell communication | GO:0010646 | 232 | 0.015 | |
| regulation of embryonic development | GO:0045995 | 47 | 0.015 | |
| regulation of ion transmembrane transporter activity | GO:0032412 | 2 | 0.015 | |
| maintenance of location | GO:0051235 | 4 | 0.015 | |
| sodium ion transmembrane transport | GO:0035725 | 21 | 0.015 | |
| locomotion | GO:0040011 | 313 | 0.015 | |
| muscle structure development | GO:0061061 | 196 | 0.015 | |
| negative regulation of apoptotic process | GO:0043066 | 55 | 0.014 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 3 | 0.014 | |
| positive regulation of biosynthetic process | GO:0009891 | 68 | 0.014 | |
| regulation of multicellular organismal development | GO:2000026 | 223 | 0.014 | |
| carboxylic acid metabolic process | GO:0019752 | 22 | 0.014 | |
| ion transmembrane transport | GO:0034220 | 91 | 0.014 | |
| regulation of nucleobase containing compound metabolic process | GO:0019219 | 250 | 0.014 | |
| heart development | GO:0007507 | 313 | 0.014 | |
| single organism transport | GO:0044765 | 206 | 0.014 | |
| regulation of circadian sleep wake cycle sleep | GO:0045187 | 1 | 0.013 | |
| digestive system development | GO:0055123 | 289 | 0.013 | |
| mesoderm development | GO:0007498 | 88 | 0.013 | |
| embryonic heart tube morphogenesis | GO:0003143 | 108 | 0.013 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 48 | 0.013 | |
| cell killing | GO:0001906 | 2 | 0.013 | |
| regulation of response to extracellular stimulus | GO:0032104 | 1 | 0.013 | |
| cytokinesis | GO:0000910 | 3 | 0.013 | |
| appendage morphogenesis | GO:0035107 | 56 | 0.013 | |
| blood circulation | GO:0008015 | 87 | 0.013 | |
| cellular ketone metabolic process | GO:0042180 | 11 | 0.013 | |
| cellular response to oxygen levels | GO:0071453 | 1 | 0.013 | |
| anion transport | GO:0006820 | 38 | 0.013 | |
| phagocytosis | GO:0006909 | 3 | 0.013 | |
| cellular response to starvation | GO:0009267 | 1 | 0.012 | |
| determination of ventral identity | GO:0048264 | 21 | 0.012 | |
| anatomical structure homeostasis | GO:0060249 | 36 | 0.012 | |
| connective tissue development | GO:0061448 | 99 | 0.012 | |
| lipid metabolic process | GO:0006629 | 52 | 0.012 | |
| nuclear division | GO:0000280 | 23 | 0.012 | |
| regulation of cell death | GO:0010941 | 103 | 0.012 | |
| developmental growth | GO:0048589 | 166 | 0.012 | |
| cellular protein catabolic process | GO:0044257 | 4 | 0.012 | |
| positive regulation of multi organism process | GO:0043902 | 3 | 0.012 | |
| positive regulation of metabolic process | GO:0009893 | 108 | 0.012 | |
| regulation of blood pressure | GO:0008217 | 1 | 0.012 | |
| oxidation reduction process | GO:0055114 | 41 | 0.012 | |
| regulation of synaptic plasticity | GO:0048167 | 1 | 0.012 | |
| cellular amino acid metabolic process | GO:0006520 | 7 | 0.012 | |
| organonitrogen compound metabolic process | GO:1901564 | 74 | 0.012 | |
| striated muscle cell differentiation | GO:0051146 | 129 | 0.012 | |
| regulation of inflammatory response | GO:0050727 | 2 | 0.012 | |
| skin development | GO:0043588 | 54 | 0.012 | |
| multicellular organism growth | GO:0035264 | 4 | 0.012 | |
| autophagy | GO:0006914 | 4 | 0.012 | |
| negative regulation of catalytic activity | GO:0043086 | 21 | 0.012 | |
| embryonic organ development | GO:0048568 | 381 | 0.012 | |
| negative regulation of protein kinase activity | GO:0006469 | 4 | 0.012 | |
| negative regulation of protein serine threonine kinase activity | GO:0071901 | 2 | 0.012 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 57 | 0.012 | |
| positive regulation of carbohydrate metabolic process | GO:0045913 | 1 | 0.012 | |
| cellular carbohydrate metabolic process | GO:0044262 | 4 | 0.012 | |
| determination of bilateral symmetry | GO:0009855 | 204 | 0.012 | |
| mitotic cell cycle embryonic | GO:0045448 | 2 | 0.012 | |
| macromolecule deacylation | GO:0098732 | 3 | 0.012 | |
| oxoacid metabolic process | GO:0043436 | 31 | 0.012 | |
| sensory organ morphogenesis | GO:0090596 | 200 | 0.012 | |
| stem cell maintenance | GO:0019827 | 4 | 0.012 | |
| negative regulation of transcription dna templated | GO:0045892 | 45 | 0.012 | |
| regulation of establishment of protein localization | GO:0070201 | 4 | 0.011 | |
| phosphatidylinositol biosynthetic process | GO:0006661 | 1 | 0.011 | |
| nerve development | GO:0021675 | 45 | 0.011 | |
| response to corticosteroid | GO:0031960 | 1 | 0.011 | |
| lymphocyte mediated immunity | GO:0002449 | 5 | 0.011 | |
| cell morphogenesis involved in differentiation | GO:0000904 | 195 | 0.011 | |
| organic acid metabolic process | GO:0006082 | 31 | 0.011 | |
| regulation of molecular function | GO:0065009 | 70 | 0.011 | |
| macromolecule modification | GO:0043412 | 111 | 0.011 | |
| response to organic cyclic compound | GO:0014070 | 51 | 0.011 | |
| regulation of immune effector process | GO:0002697 | 5 | 0.011 | |
| regulation of cytokine mediated signaling pathway | GO:0001959 | 3 | 0.011 | |
| positive regulation of cytokine production | GO:0001819 | 2 | 0.011 | |
| negative regulation of kinase activity | GO:0033673 | 4 | 0.011 | |
| formation of primary germ layer | GO:0001704 | 62 | 0.011 | |
| regulation of symbiosis encompassing mutualism through parasitism | GO:0043903 | 1 | 0.011 | |
| negative regulation of ras protein signal transduction | GO:0046580 | 1 | 0.011 | |
| negative regulation of cell fate specification | GO:0009996 | 11 | 0.011 | |
| negative regulation of multi organism process | GO:0043901 | 3 | 0.011 | |
| small molecule metabolic process | GO:0044281 | 77 | 0.011 | |
| muscle cell differentiation | GO:0042692 | 139 | 0.011 | |
| regulation of dna replication | GO:0006275 | 3 | 0.011 | |
| epidermal cell differentiation | GO:0009913 | 36 | 0.011 | |
| chemical homeostasis | GO:0048878 | 49 | 0.011 | |
| negative regulation of molecular function | GO:0044092 | 23 | 0.011 | |
| sleep | GO:0030431 | 1 | 0.010 | |
| inositol lipid mediated signaling | GO:0048017 | 2 | 0.010 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 48 | 0.010 | |
| neuron cellular homeostasis | GO:0070050 | 3 | 0.010 | |
| b cell activation | GO:0042113 | 2 | 0.010 | |
| regulation of cell cycle | GO:0051726 | 52 | 0.010 | |
| bone remodeling | GO:0046849 | 2 | 0.010 | |
| synaptic growth at neuromuscular junction | GO:0051124 | 2 | 0.010 | |
| positive regulation of defense response | GO:0031349 | 9 | 0.010 | |
| positive regulation of leukocyte mediated immunity | GO:0002705 | 1 | 0.010 | |
| regulation of carbohydrate metabolic process | GO:0006109 | 4 | 0.010 | |
| response to nitrogen compound | GO:1901698 | 19 | 0.010 | |
| regulation of transmembrane transporter activity | GO:0022898 | 2 | 0.010 | |
| peptide transport | GO:0015833 | 1 | 0.010 | |
