Danio rerio

0 known processes

shfm1

split hand/foot malformation (ectrodactyly) type 1

(Aliases: zgc:56203,zgc:85901,Shfdg1,wu:fb55c02)

shfm1 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
larval developmentGO:000216420.475
Worm
regulation of meiotic cell cycleGO:005144510.373
meiotic nuclear divisionGO:000712640.345
embryo development ending in birth or egg hatchingGO:00097922710.224
Worm
lipid storageGO:001991510.222
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.196
cellular component movementGO:00069283350.163
proteolysis involved in cellular protein catabolic processGO:005160330.157
mitotic dna integrity checkpointGO:004477440.119
agingGO:000756820.105
locomotionGO:00400113130.102
maintenance of locationGO:005123540.094
cellular protein catabolic processGO:004425740.093
meiotic chromosome segregationGO:004513230.080
multicellular organism growthGO:003526440.077
Worm
neuron developmentGO:00486662620.077
regulation of embryonic developmentGO:0045995470.074
localization of cellGO:00516742440.074
rna biosynthetic processGO:00327741810.073
single fertilizationGO:000733830.070
pronuclear migrationGO:003504610.070
cell morphogenesisGO:00009022890.070
organelle fissionGO:0048285230.067
regulation of cellular macromolecule biosynthetic processGO:20001122220.066
positive regulation of biological processGO:00485182530.063
Worm
modification dependent macromolecule catabolic processGO:004363230.061
growthGO:00400071740.059
Worm
reproductionGO:0000003400.058
Worm
cell migrationGO:00164772370.057
cell motilityGO:00488702440.057
regionalizationGO:00030022740.056
meiotic cell cycle processGO:190304630.056
proteasomal protein catabolic processGO:001049820.056
regulation of macromolecule metabolic processGO:00602553170.053
Worm
fertilizationGO:000956630.050
regulation of cell cycleGO:0051726520.050
organelle organizationGO:00069962270.049
regulation of mrna splicing via spliceosomeGO:004802430.049
regulation of chromosome segregationGO:005198310.049
establishment of localizationGO:00512342440.048
Worm
cell projection morphogenesisGO:00488582440.047
nitrogen compound metabolic processGO:00068073190.045
regulation of gene expressionGO:00104682650.045
regulation of multicellular organism growthGO:004001440.045
Worm
chordate embryonic developmentGO:00430092710.044
organic cyclic compound metabolic processGO:19013603010.044
cellular protein metabolic processGO:00442671290.042
Worm
tube morphogenesisGO:00352393490.042
protein metabolic processGO:00195381830.042
Worm
cellular macromolecule metabolic processGO:00442603910.042
Worm
modification dependent protein catabolic processGO:001994130.041
gland developmentGO:00487321430.039
cellular aromatic compound metabolic processGO:00067252950.039
cell divisionGO:0051301200.039
macromolecule modificationGO:00434121110.038
Worm
meiosis iiGO:000713510.035
chromosome organization involved in meiosisGO:007019210.035
organism emergence from protective structureGO:007168440.035
neuron differentiationGO:00301823530.034
multi organism processGO:00517041340.034
Worm
neuron projection developmentGO:00311751800.033
somitogenesisGO:0001756870.033
cellular component assemblyGO:00226071700.032
regulation of nitrogen compound metabolic processGO:00511712510.032
generation of neuronsGO:00486993850.031
response to drugGO:004249330.031
cellular component morphogenesisGO:00329893360.031
single organism reproductive processGO:0044702400.031
Worm
mitotic g2 dna damage checkpointGO:000709530.030
regulation of cellular component organizationGO:0051128860.030
single organism organelle organizationGO:19025891990.029
cell projection organizationGO:00300302840.028
regulation of cellular biosynthetic processGO:00313262450.028
small molecule metabolic processGO:0044281770.028
anterior posterior pattern specificationGO:00099521520.028
microtubule based movementGO:0007018330.028
heterocycle metabolic processGO:00464832900.027
ubiquitin dependent protein catabolic processGO:000651130.027
regulation of biological qualityGO:00650082630.027
regulation of synapse assemblyGO:005196330.027
regulation of protein modification by small protein conjugation or removalGO:190332030.027
Worm
cellular response to stressGO:0033554620.026
catabolic processGO:0009056320.026
cell part morphogenesisGO:00329902460.026
establishment of protein localization to organelleGO:007259440.026
regulation of biosynthetic processGO:00098892500.025
regulation of nucleic acid templated transcriptionGO:19035062130.025
development of primary female sexual characteristicsGO:004654540.024
nucleobase containing compound biosynthetic processGO:00346542050.024
mitotic cell cycle processGO:1903047480.024
heterocycle biosynthetic processGO:00181302150.024
nucleic acid templated transcriptionGO:00976591810.024
mitotic nuclear divisionGO:0007067180.024
protein localization to nucleusGO:003450430.023
mitochondrion organizationGO:000700540.023
regulation of metabolic processGO:00192223590.023
Worm
mitotic g2 m transition checkpointGO:004481830.022
cell proliferationGO:0008283800.022
double strand break repair via homologous recombinationGO:000072410.022
ribonucleoside monophosphate catabolic processGO:000915840.022
cell cycle processGO:0022402530.021
cellular component biogenesisGO:00440851780.021
developmental growthGO:00485891660.021
Worm
cellular nitrogen compound biosynthetic processGO:00442712180.020
ameboidal type cell migrationGO:00016671430.020
mitotic dna damage checkpointGO:004477340.020
nucleobase containing compound metabolic processGO:00061392740.020
stem cell differentiationGO:00488631170.020
organic cyclic compound biosynthetic processGO:19013622230.020
cellular protein modification processGO:00064641000.020
Worm
stem cell maintenanceGO:001982740.019
gene expressionGO:00104672520.019
macromolecular complex subunit organizationGO:0043933740.019
heart developmentGO:00075073130.019
digestive tract developmentGO:00485652650.019
nuclear divisionGO:0000280230.019
nucleobase containing small molecule metabolic processGO:0055086320.019
regulation of nucleobase containing compound metabolic processGO:00192192500.019
hatchingGO:003518840.019
embryonic organ developmentGO:00485683810.018
cellular response to chemical stimulusGO:00708871570.018
response to abiotic stimulusGO:00096281220.018
liver developmentGO:0001889960.018
cytoskeleton dependent cytokinesisGO:006164030.018
spliceosomal snrnp assemblyGO:000038720.018
developmental process involved in reproductionGO:0003006270.017
Worm
response to chemicalGO:00422213200.017
organonitrogen compound metabolic processGO:1901564740.017
somite developmentGO:0061053960.017
response to stressGO:00069502630.017
enzyme linked receptor protein signaling pathwayGO:00071671060.017
dna templated transcription initiationGO:000635210.017
regulation of organelle organizationGO:0033043290.017
regulation of rna biosynthetic processGO:20011412130.016
positive regulation of transportGO:005105020.016
stem cell proliferationGO:007208940.016
regulation of synapse organizationGO:005080730.016
positive regulation of cellular processGO:00485222010.016
Worm
regulation of extrinsic apoptotic signaling pathway in absence of ligandGO:200123910.016
morphogenesis of an epitheliumGO:00020093330.016
cellular protein complex assemblyGO:0043623190.015
nucleoside monophosphate catabolic processGO:000912540.015
regulation of oocyte developmentGO:006028130.015
mitotic sister chromatid segregationGO:000007060.015
actin cytoskeleton organizationGO:0030036630.015
regulation of cellular metabolic processGO:00313233200.015
Worm
regulation of establishment of protein localizationGO:007020140.015
negative regulation of cellular processGO:00485232830.015
regulation of bindingGO:005109830.015
cellular process involved in reproduction in multicellular organismGO:0022412280.015
Worm
aromatic compound biosynthetic processGO:00194382170.015
regulation of programmed cell deathGO:00430671010.015
nucleic acid metabolic processGO:00903042440.014
g2 dna damage checkpointGO:003157230.014
single organism nuclear importGO:190259330.014
locomotor rhythmGO:004547530.014
transmembrane receptor protein tyrosine kinase signaling pathwayGO:0007169420.014
regulation of multicellular organismal processGO:00512392770.014
Worm
gamete generationGO:0007276330.014
Worm
cellular biosynthetic processGO:00442492860.014
positive regulation of nitrogen compound metabolic processGO:0051173690.014
regulation of cell proliferationGO:0042127370.014
cellular nitrogen compound metabolic processGO:00346412900.014
hepaticobiliary system developmentGO:0061008980.014
regulation of transcription dna templatedGO:00063552130.014
cell cycleGO:0007049930.014
g1 s transition of mitotic cell cycleGO:000008210.014
positive regulation of rna biosynthetic processGO:1902680570.014
regulation of primary metabolic processGO:00800903110.014
Worm
negative regulation of cytoplasmic transportGO:190365020.013
transcription dna templatedGO:00063511810.013
multicellular organismal macromolecule metabolic processGO:004425920.013
regulation of synaptic growth at neuromuscular junctionGO:000858210.013
proteolysisGO:0006508380.013
nuclear migrationGO:000709730.013
negative regulation of response to stimulusGO:00485851040.013
regulation of protein complex assemblyGO:004325430.013
nuclear importGO:005117030.013
regulation of macromolecule biosynthetic processGO:00105562250.013
transportGO:00068102200.013
Worm
system processGO:00030081850.013
Worm
regulation of cell communicationGO:00106462320.013
mitotic cell cycleGO:0000278640.013
double strand break repairGO:000630230.012
multi organism reproductive processGO:0044703360.012
Worm
neuroblast proliferationGO:000740520.012
regulation of proteolysis involved in cellular protein catabolic processGO:190305010.012
positive regulation of catabolic processGO:000989640.012
actin mediated cell contractionGO:007025210.012
negative regulation of biological processGO:00485193040.012
negative regulation of protein transportGO:005122430.012
protein importGO:001703830.012
protein import into nucleusGO:000660630.012
positive regulation of biosynthetic processGO:0009891680.012
negative regulation of immune responseGO:005077720.012
regulation of nucleocytoplasmic transportGO:004682220.012
response to endogenous stimulusGO:0009719830.012
segmentationGO:0035282970.011
atp catabolic processGO:000620040.011
regulation of ion transmembrane transporter activityGO:003241220.011
muscle structure developmentGO:00610611960.011
positive regulation of cellular component biogenesisGO:004408930.011
protein polyubiquitinationGO:000020940.011
reproductive processGO:0022414400.011
Worm
single organism metabolic processGO:00447102170.011
macromolecule localizationGO:0033036540.011
regulation of mitotic cell cycle embryonicGO:000979420.011
cellular catabolic processGO:0044248270.011
developmental programmed cell deathGO:001062340.011
regulation of transcription from rna polymerase ii promoterGO:00063571140.011
regulation of intracellular protein transportGO:003315730.011
oocyte anterior posterior axis specificationGO:000731440.011
biosynthetic processGO:00090582940.011
positive regulation of gene expressionGO:0010628710.011
regulation of cell cycle processGO:0010564200.011
axis specificationGO:0009798430.011
rna metabolic processGO:00160702190.011
cellular response to organic substanceGO:00713101050.011
positive regulation of dna templated transcription elongationGO:003278610.011
positive regulation of wound healingGO:009030310.011
regulation of rna metabolic processGO:00512522240.011
deathGO:00162651210.010
protein secretionGO:000930610.010
regulation of inflammatory responseGO:005072720.010
mesenchyme developmentGO:00604851270.010
synaptic growth at neuromuscular junctionGO:005112420.010
autophagyGO:000691440.010
regulation of nuclear divisionGO:005178390.010
regulation of protein transportGO:005122330.010
nuclear transportGO:005116940.010

shfm1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
physical disorderDOID:008001500.019
disease of anatomical entityDOID:700.018