Danio rerio

24 known processes

hdac3

histone deacetylase 3

(Aliases: zgc:55927,MGC55927)

hdac3 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
embryo development ending in birth or egg hatchingGO:00097922710.587
Worm
larval developmentGO:000216420.523
Worm
positive regulation of biological processGO:00485182530.374
nucleobase containing compound metabolic processGO:00061392740.374
Worm
locomotionGO:00400113130.355
Worm
regulation of biological qualityGO:00650082630.325
regulation of protein complex assemblyGO:004325430.307
gene expressionGO:00104672520.294
positive regulation of cellular processGO:00485222010.276
cellular nitrogen compound metabolic processGO:00346412900.276
Worm
regulation of cellular biosynthetic processGO:00313262450.269
nucleobase containing compound biosynthetic processGO:00346542050.262
digestive tract developmentGO:00485652650.247
heterocycle metabolic processGO:00464832900.238
Worm
cellular macromolecule biosynthetic processGO:00346452240.234
nucleic acid templated transcriptionGO:00976591810.222
regulation of nucleobase containing compound metabolic processGO:00192192500.222
rna metabolic processGO:00160702190.221
cellular aromatic compound metabolic processGO:00067252950.211
Worm
nucleic acid metabolic processGO:00903042440.209
Worm
positive regulation of transportGO:005105020.205
negative regulation of biological processGO:00485193040.204
single organism transportGO:00447652060.196
organic substance biosynthetic processGO:19015762890.193
regulation of macromolecule biosynthetic processGO:00105562250.187
cellular macromolecule metabolic processGO:00442603910.180
Worm
regulation of metabolic processGO:00192223590.178
signal transductionGO:00071654550.177
macromolecule biosynthetic processGO:00090592270.175
regulation of nucleic acid templated transcriptionGO:19035062130.175
biosynthetic processGO:00090582940.157
positive regulation of cell cycleGO:004578730.156
positive regulation of cellular component biogenesisGO:004408930.153
cell motilityGO:00488702440.151
single organism localizationGO:19025782250.146
sexual reproductionGO:0019953360.141
regulation of cellular metabolic processGO:00313233200.137
regulation of nitrogen compound metabolic processGO:00511712510.136
establishment of localizationGO:00512342440.134
protein localization to nucleusGO:003450430.133
organic cyclic compound biosynthetic processGO:19013622230.132
regulation of rna metabolic processGO:00512522240.132
rna biosynthetic processGO:00327741810.129
stem cell maintenanceGO:001982740.129
cellular biosynthetic processGO:00442492860.126
organic cyclic compound metabolic processGO:19013603010.126
Worm
regulation of transcription dna templatedGO:00063552130.119
apoptotic processGO:00069151160.118
Worm
transcription dna templatedGO:00063511810.116
transportGO:00068102200.116
regulation of rna biosynthetic processGO:20011412130.115
maintenance of locationGO:005123540.111
regulation of tube sizeGO:003515020.106
cellular nitrogen compound biosynthetic processGO:00442712180.106
cellular component biogenesisGO:00440851780.104
protein targeting to nucleusGO:004474430.104
positive regulation of protein complex assemblyGO:003133420.103
regulation of cellular macromolecule biosynthetic processGO:20001122220.102
cellular component movementGO:00069283350.097
cell migrationGO:00164772370.094
intracellular receptor signaling pathwayGO:0030522300.094
vasculature developmentGO:00019442780.093
transcription from rna polymerase ii promoterGO:0006366800.093
nuclear transportGO:005116940.092
meiotic cell cycle processGO:190304630.092
multicellular organism growthGO:003526440.092
regulation of biosynthetic processGO:00098892500.091
muscle structure developmentGO:00610611960.090
generation of neuronsGO:00486993850.089
regulation of developmental processGO:00507932470.088
organelle fusionGO:004828430.087
cell deathGO:00082191210.084
Worm
immune system processGO:00023762410.083
digestive system developmentGO:00551232890.083
protein import into nucleusGO:000660630.080
response to chemicalGO:00422213200.080
neuroblast proliferationGO:000740520.080
head developmentGO:00603223030.079
single organism nuclear importGO:190259330.078
negative regulation of cellular processGO:00485232830.078
programmed cell deathGO:00125011190.078
Worm
heart developmentGO:00075073130.078
response to stressGO:00069502630.077
Worm
establishment of protein localization to organelleGO:007259440.076
brain developmentGO:00074202930.076
aromatic compound biosynthetic processGO:00194382170.073
regulation of gene expressionGO:00104682650.071
localization of cellGO:00516742440.070
regulation of cell deathGO:00109411030.069
protein importGO:001703830.069
intracellular signal transductionGO:0035556850.068
multi organism processGO:00517041340.068
regulation of bindingGO:005109830.066
meiotic nuclear divisionGO:000712640.066
regulation of macromolecule metabolic processGO:00602553170.066
multicellular organismal reproductive processGO:0048609350.063
regulation of cellular amine metabolic processGO:003323800.062
heterocycle biosynthetic processGO:00181302150.062
regulation of cell differentiationGO:00455951420.062
neuron differentiationGO:00301823530.061
regulation of primary metabolic processGO:00800903110.061
mitochondrion organizationGO:000700540.061
multicellular organism reproductionGO:0032504350.060
regulation of molecular functionGO:0065009700.059
cytoskeleton dependent cytokinesisGO:006164030.058
regulation of cell communicationGO:00106462320.058
agingGO:000756820.057
regulation of multicellular organismal processGO:00512392770.056
regulation of transcription from rna polymerase ii promoterGO:00063571140.056
cellular component assemblyGO:00226071700.055
hematopoietic or lymphoid organ developmentGO:00485341910.054
homeostatic processGO:00425921420.054
regulation of cell developmentGO:00602841000.054
cell fate commitmentGO:0045165990.054
protein dephosphorylationGO:000647030.054
cell proliferationGO:0008283800.053
system processGO:00030081850.053
vesicle mediated transportGO:0016192220.052
homeostasis of number of cellsGO:0048872620.052
negative regulation of response to stimulusGO:00485851040.052
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.052
regulation of mitotic cell cycleGO:0007346250.052
modification dependent protein catabolic processGO:001994130.049
regulation of establishment of protein localizationGO:007020140.049
negative regulation of cell cycleGO:0045786140.048
response to monosaccharideGO:003428430.047
nucleocytoplasmic transportGO:000691340.047
nuclear importGO:005117030.046
protein metabolic processGO:00195381830.046
synaptic growth at neuromuscular junctionGO:005112420.045
regulation of cell cycle phase transitionGO:190198780.045
single organism organelle organizationGO:19025891990.044
regulation of cell cycleGO:0051726520.044
regulation of cellular component organizationGO:0051128860.044
cellular response to organic substanceGO:00713101050.044
gland developmentGO:00487321430.043
regulation of protein bindingGO:004339330.043
deathGO:00162651210.043
Worm
digestive tract morphogenesisGO:00485462310.043
negative regulation of cell communicationGO:0010648960.042
regulation of apoptotic processGO:0042981980.042
multi organism reproductive processGO:0044703360.042
negative regulation of protein phosphorylationGO:000193340.042
regulation of response to stimulusGO:00485832690.041
cell surface receptor signaling pathwayGO:00071663250.041
mitotic dna damage checkpointGO:004477340.041
regulation of blood pressureGO:000821710.041
regulation of cellular amino acid metabolic processGO:000652100.040
regulation of cell cycle processGO:0010564200.040
regulation of mitotic cell cycle phase transitionGO:190199080.040
mitotic cell cycleGO:0000278640.040
stem cell differentiationGO:00488631170.039
epithelial cell differentiationGO:00308551160.039
regulation of signalingGO:00230512350.039
phagocytosisGO:000690930.039
cell substrate adhesionGO:003158940.039
regulation of signal transductionGO:00099662250.038
membrane fusionGO:006102520.038
blood circulationGO:0008015870.038
negative regulation of catabolic processGO:000989530.038
stem cell divisionGO:001714510.037
negative regulation of signal transductionGO:0009968940.037
kidney developmentGO:0001822920.037
positive regulation of macromolecule metabolic processGO:0010604930.037
regulation of intracellular protein transportGO:003315730.037
blood vessel morphogenesisGO:00485142160.037
regulation of systemic arterial blood pressureGO:000307310.037
negative regulation of developmental processGO:0051093650.037
positive regulation of translationGO:004572710.036
peptidyl serine phosphorylationGO:001810510.036
regulation of anatomical structure sizeGO:0090066330.036
regulation of protein localization to nucleusGO:190018020.036
g2 dna damage checkpointGO:003157230.036
response to organic substanceGO:00100331530.035
negative regulation of signalingGO:0023057960.035
tube morphogenesisGO:00352393490.035
response to glucoseGO:000974930.034
cellular protein metabolic processGO:00442671290.034
mitotic g2 dna damage checkpointGO:000709530.034
regulation of protein transportGO:005122330.034
central nervous system developmentGO:00074173870.034
regulation of meiotic cell cycleGO:005144510.033
cell cycleGO:0007049930.033
dorsal ventral pattern formationGO:00099531250.033
skin developmentGO:0043588540.033
regionalizationGO:00030022740.032
circulatory system processGO:0003013870.032
regulation of anatomical structure morphogenesisGO:00226031300.032
purine nucleoside monophosphate catabolic processGO:000912840.031
reproductive processGO:0022414400.031
Worm
morphogenesis of an epitheliumGO:00020093330.031
immune system developmentGO:00025201910.031
positive regulation of dna metabolic processGO:005105410.031
negative regulation of metabolic processGO:0009892860.031
regulation of cell projection assemblyGO:006049140.031
regulation of synaptic plasticityGO:004816710.031
regulation of epithelial cell proliferationGO:005067830.030
gastrulationGO:00073692080.030
mitotic g2 m transition checkpointGO:004481830.030
regulation of receptor activityGO:001046920.030
negative regulation of cell differentiationGO:0045596460.030
positive regulation of stress activated protein kinase signaling cascadeGO:007030430.030
single organism membrane fusionGO:004480120.029
membrane invaginationGO:001032410.029
eye developmentGO:00016542770.029
cellular carbohydrate metabolic processGO:004426240.029
response to carbohydrateGO:000974330.029
amine metabolic processGO:000930820.029
positive regulation of cellular metabolic processGO:0031325940.028
stem cell proliferationGO:007208940.028
negative regulation of cellular metabolic processGO:0031324770.028
proteasomal protein catabolic processGO:001049820.028
dna templated transcription initiationGO:000635210.028
positive regulation of cellular amine metabolic processGO:003324000.028
oxoacid metabolic processGO:0043436310.028
regulation of synapse organizationGO:005080730.028
cellular response to external stimulusGO:007149620.028
Worm
positive regulation of apoptotic signaling pathwayGO:200123510.028
developmental growthGO:00485891660.027
regulation of cyclin dependent protein serine threonine kinase activityGO:000007910.027
positive regulation of secretionGO:005104710.027
mitotic dna integrity checkpointGO:004477440.027
proteolysis involved in cellular protein catabolic processGO:005160330.027
nitrogen compound metabolic processGO:00068073190.027
Worm
sensory organ developmentGO:00074233930.027
stem cell developmentGO:0048864820.026
segmentationGO:0035282970.026
autophagyGO:000691440.026
positive regulation of cell adhesionGO:004578510.026
anterior posterior pattern specificationGO:00099521520.025
regulation of multicellular organismal developmentGO:20000262230.025
neuron developmentGO:00486662620.025
cellular component morphogenesisGO:00329893360.025
regulation of synaptic growth at neuromuscular junctionGO:000858210.025
cellular component disassemblyGO:002241110.025
camera type eye developmentGO:00430102220.025
regulation of blood vessel sizeGO:005088020.025
reproductionGO:0000003400.025
Worm
organelle organizationGO:00069962270.025
cell cycle g1 s phase transitionGO:004484310.025
negative regulation of multicellular organismal processGO:0051241690.024
g1 s transition of mitotic cell cycleGO:000008210.024
protein modification processGO:00362111000.024
negative regulation of cellular macromolecule biosynthetic processGO:2000113480.024
phosphorus metabolic processGO:00067931090.024
cellular response to chemical stimulusGO:00708871570.024
signal transduction in absence of ligandGO:003803410.023
cytokinesisGO:000091030.023
small molecule metabolic processGO:0044281770.023
regulation of programmed cell deathGO:00430671010.023
cellular localizationGO:0051641970.023
renal system developmentGO:0072001940.023
synaptic vesicle localizationGO:009747910.022
muscle organ developmentGO:00075171010.022
organelle assemblyGO:00709251100.022
macromolecular complex assemblyGO:0065003350.022
positive regulation of metabolic processGO:00098931080.022
protein acetylationGO:000647320.022
rna localizationGO:000640340.022
cellular response to endogenous stimulusGO:0071495680.022
embryonic axis specificationGO:0000578120.022
germ line stem cell maintenanceGO:003071820.022
negative regulation of mitotic cell cycle phase transitionGO:190199150.022
response to hexoseGO:000974630.022
organic acid metabolic processGO:0006082310.022
angiogenesisGO:00015251580.022
positive regulation of stress activated mapk cascadeGO:003287430.022
embryonic pattern specificationGO:0009880440.021
negative regulation of cell cycle processGO:001094890.021
cell morphogenesisGO:00009022890.021
regulation of protein targetingGO:190353320.021
negative regulation of protein kinase activityGO:000646940.021
positive regulation of nucleobase containing compound metabolic processGO:0045935690.021
extrinsic apoptotic signaling pathwayGO:009719130.020
endocrine system developmentGO:0035270650.020
peptidyl lysine acetylationGO:001839420.020
cytoplasm organizationGO:000702840.020
negative regulation of nitrogen compound metabolic processGO:0051172590.020
single organism reproductive processGO:0044702400.020
cellular ketone metabolic processGO:0042180110.020
peptidyl serine modificationGO:001820920.020
negative regulation of macromolecule biosynthetic processGO:0010558480.020
rna stabilizationGO:004348940.020
organonitrogen compound metabolic processGO:1901564740.020
regulation of mrna processingGO:005068430.020
nucleobase containing compound transportGO:001593120.020
positive regulation of cellular amino acid metabolic processGO:004576400.020
response to endogenous stimulusGO:0009719830.020
energy reserve metabolic processGO:000611220.019
macromolecule localizationGO:0033036540.019
regulation of synapse assemblyGO:005196330.019
establishment of localization in cellGO:0051649770.019
phagocytosis engulfmentGO:000691110.019
cellular amine metabolic processGO:004410620.019
macromolecule modificationGO:00434121110.019
striated muscle tissue developmentGO:00147061100.019
negative regulation of gene expressionGO:0010629650.019
specification of symmetryGO:00097992040.019
actin filament polymerizationGO:003004120.019
mesenchyme developmentGO:00604851270.019
regulation of neurogenesisGO:0050767870.019
epithelial cell developmentGO:0002064420.019
negative regulation of nuclear divisionGO:005178430.019
retina development in camera type eyeGO:00600411460.019
calcium mediated signalingGO:001972220.019
regulation of stem cell proliferationGO:007209120.019
regulation of organelle organizationGO:0033043290.018
muscle cell differentiationGO:00426921390.018
regulation of multicellular organism growthGO:004001440.018
regulation of protein catabolic processGO:004217610.018
ear developmentGO:00435831270.018
cell cycle checkpointGO:000007570.018
regulation of cellular protein catabolic processGO:190336210.018
positive regulation of rna biosynthetic processGO:1902680570.018
carbohydrate homeostasisGO:003350010.018
regulation of extrinsic apoptotic signaling pathwayGO:200123630.018
positive regulation of response to stimulusGO:0048584800.018
guanosine containing compound metabolic processGO:190106840.017
neuron neuron synaptic transmissionGO:000727010.017
lipid homeostasisGO:005508830.017
microtubule based processGO:0007017600.017
carboxylic acid metabolic processGO:0019752220.017
mrna stabilizationGO:004825540.017
gamete generationGO:0007276330.017
cellular amino acid metabolic processGO:000652070.017
protein complex disassemblyGO:004324110.017
regulation of protein polymerizationGO:003227120.017
single organism cellular localizationGO:1902580460.017
regulation of cytoplasmic transportGO:190364940.017
wound healingGO:0042060900.017
female meiotic divisionGO:000714320.017
regulation of exocytosisGO:001715710.017
chordate embryonic developmentGO:00430092710.017
lipid metabolic processGO:0006629520.017
phosphate containing compound metabolic processGO:00067961080.016
hemopoiesisGO:00300971830.016
positive regulation of catabolic processGO:000989640.016
positive regulation of multicellular organismal processGO:0051240520.016
adult behaviorGO:003053420.016
ameboidal type cell migrationGO:00016671430.016
regulation of protein metabolic processGO:0051246560.016
cell projection organizationGO:00300302840.016
regulation of nervous system developmentGO:0051960900.016
regulation of stem cell differentiationGO:200073640.016
rna transportGO:005065820.016
negative regulation of nucleocytoplasmic transportGO:004682320.016
organic substance catabolic processGO:1901575280.016
modification dependent macromolecule catabolic processGO:004363230.016
regulation of cell proliferationGO:0042127370.016
response to drugGO:004249330.015
negative regulation of cell deathGO:0060548600.015
regulation of localizationGO:00328791040.015
cellular response to nutrient levelsGO:003166920.015
negative regulation of biosynthetic processGO:0009890550.015
cellular protein modification processGO:00064641000.015
convergent extensionGO:00600261180.015
urogenital system developmentGO:0001655970.015
maternal determination of anterior posterior axis embryoGO:000835840.015
guanosine containing compound catabolic processGO:190106920.015
negative regulation of transcription from rna polymerase ii promoterGO:0000122160.015
cilium morphogenesisGO:0060271850.015
single organism metabolic processGO:00447102170.015
Worm
positive regulation of cell proliferationGO:0008284150.015
extrinsic apoptotic signaling pathway via death domain receptorsGO:000862510.015
negative regulation of nucleic acid templated transcriptionGO:1903507450.015
chemical homeostasisGO:0048878490.015
regulation of nucleocytoplasmic transportGO:004682220.014
myeloid cell homeostasisGO:0002262560.014
organic substance transportGO:0071702580.014
positive regulation of purine nucleotide catabolic processGO:003312310.014
fertilizationGO:000956630.014
negative regulation of apoptotic processGO:0043066550.014
negative regulation of extrinsic apoptotic signaling pathwayGO:200123720.014
protein complex biogenesisGO:0070271300.014
interspecies interaction between organismsGO:004441940.014
regulation of cytokine productionGO:000181730.014
ubiquitin dependent protein catabolic processGO:000651130.014
mitotic cell cycle processGO:1903047480.014
cellular response to extracellular stimulusGO:003166820.014
Worm
rna processingGO:0006396250.014
cell migration involved in gastrulationGO:0042074790.014
hormone transportGO:000991420.014
regulation of cellular localizationGO:0060341120.014
regulation of transportGO:0051049450.014
gtp metabolic processGO:004603940.014
neuromuscular synaptic transmissionGO:000727420.014
centrosome organizationGO:005129710.014
protein localization to plasma membraneGO:007265910.014
regulation of carbohydrate metabolic processGO:000610940.014
regulation of reproductive processGO:200024140.014
membrane organizationGO:0061024210.014
nucleoside monophosphate catabolic processGO:000912540.014
negative regulation of cellular biosynthetic processGO:0031327550.014
mitotic cytokinesisGO:000028130.014
hormone secretionGO:004687920.014
cellular protein catabolic processGO:004425740.014
regulation of cellular ketone metabolic processGO:001056570.013
regulation of transcription elongation from rna polymerase ii promoterGO:003424330.013
response to ketoneGO:190165410.013
determination of bilateral symmetryGO:00098552040.013
positive regulation of nitrogen compound metabolic processGO:0051173690.013
mononuclear cell proliferationGO:003294310.013
protein localizationGO:0008104400.013
pole plasm assemblyGO:000731540.013
regulation of organ growthGO:004662030.013
blood vessel developmentGO:00015682460.013
neuron projection developmentGO:00311751800.013
positive regulation of rna metabolic processGO:0051254590.013
viral processGO:001603210.013
regulation of protein import into nucleusGO:004230620.013
negative regulation of transcription dna templatedGO:0045892450.013
leukocyte homeostasisGO:000177620.013
exocytosisGO:000688710.013
single organism membrane organizationGO:0044802200.013
post embryonic developmentGO:000979170.013
Worm
regulation of protein modification by small protein conjugation or removalGO:190332030.013
chemotaxisGO:00069351040.013
endocytosisGO:0006897160.013
neuron projection morphogenesisGO:00488121610.012
cellular response to stressGO:0033554620.012
Worm
pronephros developmentGO:0048793690.012
positive regulation of transcription dna templatedGO:0045893570.012
glucose homeostasisGO:004259310.012
positive regulation of cellular catabolic processGO:003133130.012
regulation of cellular protein metabolic processGO:0032268520.012
positive regulation of secretion by cellGO:190353210.012
response to nutrientGO:000758430.012
cell part morphogenesisGO:00329902460.012
endomembrane system organizationGO:0010256130.012
protein polymerizationGO:005125840.012
positive regulation of biosynthetic processGO:0009891680.012
germ cell developmentGO:0007281220.012
cognitionGO:005089010.012
body morphogenesisGO:0010171160.012
secondary metabolic processGO:001974830.012
behaviorGO:0007610740.012
macromolecular complex disassemblyGO:003298410.012
cellular macromolecule catabolic processGO:0044265120.012
lipid storageGO:001991510.012
cellular response to molecule of bacterial originGO:007121930.012
response to alkaloidGO:004327920.012
negative regulation of sequence specific dna binding transcription factor activityGO:004343320.012
neurological system processGO:0050877620.012
negative regulation of programmed cell deathGO:0043069580.012
establishment of protein localization to plasma membraneGO:009000210.012
meiotic chromosome segregationGO:004513230.012
symbiosis encompassing mutualism through parasitismGO:004440340.012
protein complex assemblyGO:0006461300.011
positive regulation of macromolecule biosynthetic processGO:0010557590.011
intracellular steroid hormone receptor signaling pathwayGO:003051850.011
aromatic compound catabolic processGO:0019439150.011
establishment of synaptic vesicle localizationGO:009748010.011
negative regulation of cellular catabolic processGO:003133030.011
synaptic vesicle transportGO:004848910.011
regulation of calcium ion transportGO:005192420.011
cellular response to lipidGO:0071396390.011
regulation of metal ion transportGO:001095940.011
protein homooligomerizationGO:005126030.011
lymphocyte proliferationGO:004665110.011
multi organism cellular processGO:004476420.011
purine ribonucleoside monophosphate catabolic processGO:000916940.011
gtp catabolic processGO:000618420.011
negative regulation of nucleobase containing compound metabolic processGO:0045934590.011
peptide transportGO:001583310.011
establishment of organelle localizationGO:0051656450.011
forebrain developmentGO:0030900960.011
cellular macromolecular complex assemblyGO:0034622240.011
cellular response to retinoic acidGO:007130010.011
growthGO:00400071740.011
response to woundingGO:00096111160.011
regulation of cellular carbohydrate metabolic processGO:001067540.011
cell morphogenesis involved in differentiationGO:00009041950.011
epidermis developmentGO:0008544480.011
internal protein amino acid acetylationGO:000647520.011
regulation of vasculature developmentGO:1901342330.011
cilium assemblyGO:0042384580.011
regulation of cell substrate adhesionGO:001081010.011
negative regulation of mapk cascadeGO:004340940.011
synaptic vesicle endocytosisGO:004848810.011
response to growth factorGO:0070848390.011
regulation of phosphorus metabolic processGO:0051174430.011
intracellular transportGO:0046907320.011
negative regulation of protein serine threonine kinase activityGO:007190120.011
cell projection assemblyGO:0030031640.011
myeloid cell differentiationGO:0030099860.010
regulation of mitochondrion organizationGO:001082110.010
macromolecule catabolic processGO:0009057150.010
startle responseGO:000196440.010
mitotic nuclear divisionGO:0007067180.010
negative regulation of protein transportGO:005122430.010
positive regulation of jnk cascadeGO:004633030.010
nucleic acid transportGO:005065720.010
cell cell signalingGO:0007267520.010
cellular process involved in reproduction in multicellular organismGO:0022412280.010
negative regulation of chromosome organizationGO:200125110.010

hdac3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.025
nervous system diseaseDOID:86300.013
sensory system diseaseDOID:005015500.012
eye and adnexa diseaseDOID:149200.010