Danio rerio

0 known processes

lima1

LIM domain and actin binding 1

(Aliases: cb1006,wu:fd20b10,eplin,wu:fd15g06)

lima1 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
generation of neuronsGO:00486993850.243
negative regulation of cellular processGO:00485232830.208
cell morphogenesis involved in neuron differentiationGO:00486671630.205
response to organic substanceGO:00100331530.186
single organism metabolic processGO:00447102170.139
organelle organizationGO:00069962270.137
sensory organ developmentGO:00074233930.134
positive regulation of cellular amine metabolic processGO:003324000.131
neuron developmentGO:00486662620.130
cell motilityGO:00488702440.121
cellular component assemblyGO:00226071700.116
positive regulation of cellular amino acid metabolic processGO:004576400.114
positive regulation of transportGO:005105020.110
protein acetylationGO:000647320.108
cellular ketone metabolic processGO:0042180110.106
negative regulation of biological processGO:00485193040.102
organic acid metabolic processGO:0006082310.102
cell projection organizationGO:00300302840.101
macromolecular complex subunit organizationGO:0043933740.099
amine metabolic processGO:000930820.097
cell projection morphogenesisGO:00488582440.096
localization of cellGO:00516742440.094
neuron projection morphogenesisGO:00488121610.094
regulation of cellular biosynthetic processGO:00313262450.091
regulation of multicellular organism growthGO:004001440.091
eye developmentGO:00016542770.091
cortical actin cytoskeleton organizationGO:003086610.089
purine nucleoside monophosphate catabolic processGO:000912840.089
neuron differentiationGO:00301823530.089
cellular macromolecule metabolic processGO:00442603910.087
cellular macromolecule biosynthetic processGO:00346452240.085
cellular amine metabolic processGO:004410620.085
regulation of multicellular organismal processGO:00512392770.084
multicellular organism growthGO:003526440.083
cellular component biogenesisGO:00440851780.083
developmental growthGO:00485891660.080
stem cell proliferationGO:007208940.080
regulation of cellular amine metabolic processGO:003323800.079
cortical cytoskeleton organizationGO:003086510.078
immune system developmentGO:00025201910.078
negative regulation of developmental processGO:0051093650.078
negative regulation of gene expressionGO:0010629650.075
regulation of cellular amino acid metabolic processGO:000652100.075
angiogenesisGO:00015251580.074
oxoacid metabolic processGO:0043436310.072
establishment of localizationGO:00512342440.069
cell part morphogenesisGO:00329902460.069
cytokinesisGO:000091030.067
single organism organelle organizationGO:19025891990.067
carboxylic acid metabolic processGO:0019752220.067
negative regulation of nitrogen compound metabolic processGO:0051172590.066
positive regulation of cellular component biogenesisGO:004408930.065
regulation of stem cell proliferationGO:007209120.062
cellular biosynthetic processGO:00442492860.062
central nervous system developmentGO:00074173870.062
regulation of gene expressionGO:00104682650.061
ribonucleoside monophosphate catabolic processGO:000915840.060
neuron projection developmentGO:00311751800.059
ameboidal type cell migrationGO:00016671430.059
single organism localizationGO:19025782250.058
regulation of intracellular protein transportGO:003315730.057
cellular protein metabolic processGO:00442671290.057
cytoskeleton organizationGO:0007010960.056
response to stressGO:00069502630.054
cell fate commitmentGO:0045165990.054
negative regulation of cellular biosynthetic processGO:0031327550.053
blood vessel developmentGO:00015682460.053
protein modification processGO:00362111000.053
macromolecule biosynthetic processGO:00090592270.053
camera type eye developmentGO:00430102220.053
regulation of multicellular organismal developmentGO:20000262230.052
signal transductionGO:00071654550.052
small molecule metabolic processGO:0044281770.052
dorsal ventral pattern formationGO:00099531250.051
aromatic compound biosynthetic processGO:00194382170.051
organic cyclic compound metabolic processGO:19013603010.051
positive regulation of apoptotic signaling pathwayGO:200123510.050
response to chemicalGO:00422213200.050
regulation of transcription dna templatedGO:00063552130.050
epithelial cell differentiationGO:00308551160.050
atp catabolic processGO:000620040.050
response to ketoneGO:190165410.049
regulation of cellular ketone metabolic processGO:001056570.049
regulation of nucleocytoplasmic transportGO:004682220.049
nucleobase containing compound metabolic processGO:00061392740.049
transcription dna templatedGO:00063511810.048
regulation of macromolecule metabolic processGO:00602553170.048
negative regulation of multicellular organismal processGO:0051241690.048
response to drugGO:004249330.048
maintenance of locationGO:005123540.047
epithelial cell migrationGO:0010631250.046
ion transmembrane transportGO:0034220910.045
heart developmentGO:00075073130.045
regulation of cytoplasmic transportGO:190364940.044
regulation of nucleobase containing compound metabolic processGO:00192192500.044
tissue migrationGO:0090130370.044
peptidyl serine phosphorylationGO:001810510.043
cellular component disassemblyGO:002241110.043
regulation of stem cell differentiationGO:200073640.043
cell cycleGO:0007049930.043
cellular localizationGO:0051641970.043
cell migrationGO:00164772370.043
regulation of establishment of protein localizationGO:007020140.042
actin cytoskeleton organizationGO:0030036630.042
regulation of primary metabolic processGO:00800903110.041
ion homeostasisGO:0050801410.040
single organism transportGO:00447652060.040
organic cyclic compound biosynthetic processGO:19013622230.040
macromolecule modificationGO:00434121110.040
enzyme linked receptor protein signaling pathwayGO:00071671060.040
cellular response to chemical stimulusGO:00708871570.039
regulation of protein import into nucleusGO:004230620.039
regulation of protein transportGO:005122330.039
gene expressionGO:00104672520.039
cellular component morphogenesisGO:00329893360.039
regulation of macromolecule biosynthetic processGO:00105562250.039
epidermis developmentGO:0008544480.039
chromatin modificationGO:0016568210.039
positive regulation of secretion by cellGO:190353210.039
regulation of protein polymerizationGO:003227120.038
regulation of cellular metabolic processGO:00313233200.038
head developmentGO:00603223030.038
rna biosynthetic processGO:00327741810.038
central nervous system neuron differentiationGO:0021953740.037
heterocycle biosynthetic processGO:00181302150.036
purine ribonucleoside monophosphate catabolic processGO:000916940.036
cell migration involved in gastrulationGO:0042074790.036
rna metabolic processGO:00160702190.036
cell morphogenesis involved in differentiationGO:00009041950.036
proximal distal pattern formationGO:000995410.036
larval developmentGO:000216420.036
axon developmentGO:00615641660.035
response to carbohydrateGO:000974330.035
cellular response to extracellular stimulusGO:003166820.035
regulation of peptidyl tyrosine phosphorylationGO:005073010.035
macromolecular complex assemblyGO:0065003350.035
regionalizationGO:00030022740.035
apical junction assemblyGO:004329710.035
organic substance biosynthetic processGO:19015762890.035
response to monosaccharideGO:003428430.035
regulation of synapse organizationGO:005080730.035
locomotionGO:00400113130.034
nitrogen compound metabolic processGO:00068073190.034
positive regulation of cell cycleGO:004578730.034
transmembrane transportGO:00550851200.034
nucleocytoplasmic transportGO:000691340.034
cellular component movementGO:00069283350.033
multi organism processGO:00517041340.033
nucleoside monophosphate catabolic processGO:000912540.033
vasculature developmentGO:00019442780.033
regulation of oligodendrocyte differentiationGO:004871310.033
regulation of inflammatory responseGO:005072720.033
ion transportGO:00068111140.033
protein metabolic processGO:00195381830.032
heterocycle metabolic processGO:00464832900.032
positive regulation of cellular catabolic processGO:003133130.032
gastrulationGO:00073692080.032
neuroblast proliferationGO:000740520.031
metal ion homeostasisGO:0055065260.031
mitochondrion organizationGO:000700540.031
eye morphogenesisGO:00485921440.031
cellular response to external stimulusGO:007149620.031
stem cell divisionGO:001714510.031
blood vessel endothelial cell migrationGO:0043534180.030
negative regulation of metabolic processGO:0009892860.030
regulation of transportGO:0051049450.030
regulation of nitrogen compound metabolic processGO:00511712510.030
regulation of cell projection organizationGO:0031344440.030
endosomal transportGO:001619720.030
neurological system processGO:0050877620.030
nuclear transportGO:005116940.029
protein polymerizationGO:005125840.029
cell proliferationGO:0008283800.029
nucleic acid templated transcriptionGO:00976591810.029
epithelium migrationGO:0090132250.028
organonitrogen compound metabolic processGO:1901564740.028
negative regulation of transcription dna templatedGO:0045892450.028
negative regulation of cellular macromolecule biosynthetic processGO:2000113480.027
regulation of cell projection assemblyGO:006049140.027
cellular amino acid metabolic processGO:000652070.027
peptidyl serine modificationGO:001820920.027
positive regulation of protein polymerizationGO:003227320.027
response to external stimulusGO:00096052640.027
positive regulation of protein complex assemblyGO:003133420.027
kidney developmentGO:0001822920.027
segmentationGO:0035282970.027
negative regulation of rna metabolic processGO:0051253480.026
cellular nitrogen compound metabolic processGO:00346412900.026
nucleic acid metabolic processGO:00903042440.026
convergent extensionGO:00600261180.026
cellular response to endogenous stimulusGO:0071495680.026
regulation of cell differentiationGO:00455951420.026
peptidyl lysine acetylationGO:001839420.026
cell morphogenesisGO:00009022890.025
response to woundingGO:00096111160.025
biosynthetic processGO:00090582940.025
negative regulation of cellular component organizationGO:0051129160.025
regulation of receptor mediated endocytosisGO:004825940.025
cellular response to retinoic acidGO:007130010.025
response to growth factorGO:0070848390.025
axonogenesisGO:00074091520.025
hematopoietic or lymphoid organ developmentGO:00485341910.025
cellular response to nutrient levelsGO:003166920.025
establishment of protein localization to plasma membraneGO:009000210.025
meiotic cell cycle processGO:190304630.025
phagocytosisGO:000690930.025
regulation of synapse assemblyGO:005196330.024
cell surface receptor signaling pathwayGO:00071663250.024
hemopoiesisGO:00300971830.024
meiotic nuclear divisionGO:000712640.024
agingGO:000756820.024
single organism nuclear importGO:190259330.024
negative regulation of nucleic acid templated transcriptionGO:1903507450.024
negative regulation of protein phosphorylationGO:000193340.024
digestive system developmentGO:00551232890.024
regulation of developmental processGO:00507932470.024
negative regulation of cellular metabolic processGO:0031324770.024
negative regulation of rna biosynthetic processGO:1902679450.024
endothelial cell migrationGO:0043542190.023
cellular amino acid biosynthetic processGO:000865220.023
regulation of response to stimulusGO:00485832690.023
establishment of endothelial barrierGO:006102830.023
regulation of neurogenesisGO:0050767870.023
morphogenesis of an epitheliumGO:00020093330.023
somite developmentGO:0061053960.023
positive regulation of nucleoside metabolic processGO:004597910.023
ear developmentGO:00435831270.023
cell substrate junction assemblyGO:000704420.023
embryonic organ morphogenesisGO:00485622740.022
stem cell maintenanceGO:001982740.022
regulation of glial cell differentiationGO:004568540.022
heart morphogenesisGO:00030071560.022
cellular nitrogen compound biosynthetic processGO:00442712180.022
positive regulation of peptidyl tyrosine phosphorylationGO:005073110.022
actin filament based processGO:0030029640.022
transportGO:00068102200.022
regulation of protein ubiquitinationGO:003139630.022
renal absorptionGO:007029310.022
actin filament polymerizationGO:003004120.022
organic substance transportGO:0071702580.021
sensory perceptionGO:0007600390.021
brain developmentGO:00074202930.021
actin polymerization or depolymerizationGO:000815420.021
negative regulation of mapk cascadeGO:004340940.021
regulation of metabolic processGO:00192223590.021
skin developmentGO:0043588540.021
regulation of purine nucleotide catabolic processGO:003312120.021
negative regulation of kinase activityGO:003367340.021
muscle structure developmentGO:00610611960.021
positive regulation of notch signaling pathwayGO:004574730.021
negative regulation of nucleocytoplasmic transportGO:004682320.021
renal tubule morphogenesisGO:006133310.021
lipid storageGO:001991510.021
meiosis iGO:000712710.020
cellular aromatic compound metabolic processGO:00067252950.020
negative regulation of nucleobase containing compound metabolic processGO:0045934590.020
digestive tract morphogenesisGO:00485462310.020
regulation of jak stat cascadeGO:004642530.020
establishment of protein localization to organelleGO:007259440.020
embryonic limb morphogenesisGO:003032620.020
negative regulation of epithelial cell migrationGO:001063310.020
amino acid transportGO:000686520.019
negative regulation of stem cell differentiationGO:200073720.019
cation homeostasisGO:0055080330.019
mitotic cell cycle embryonicGO:004544820.019
cellular response to organic substanceGO:00713101050.019
axon ensheathment in central nervous systemGO:003229120.019
cytokinetic processGO:003250620.019
regulation of protein modification by small protein conjugation or removalGO:190332030.019
immune system processGO:00023762410.019
regulation of cell activationGO:005086510.019
wound healingGO:0042060900.019
regulation of rna metabolic processGO:00512522240.019
b cell differentiationGO:003018310.019
sensory organ morphogenesisGO:00905962000.019
regulation of protein bindingGO:004339330.019
estrogen metabolic processGO:000821020.019
cellular protein modification processGO:00064641000.019
regulation of tyrosine phosphorylation of stat proteinGO:004250910.019
striated muscle tissue developmentGO:00147061100.019
negative regulation of biosynthetic processGO:0009890550.019
response to organic cyclic compoundGO:0014070510.019
cell adhesionGO:0007155400.018
cell fate specificationGO:0001708680.018
blood vessel morphogenesisGO:00485142160.018
macromolecular complex disassemblyGO:003298410.018
radial glial cell differentiationGO:006001920.018
adult behaviorGO:003053420.018
neurotransmitter secretionGO:000726920.018
regulation of biosynthetic processGO:00098892500.018
positive regulation of carbohydrate metabolic processGO:004591310.018
regulation of sodium ion transportGO:000202820.018
tube morphogenesisGO:00352393490.018
exocytosisGO:000688710.018
compound eye developmentGO:004874920.018
detection of external stimulusGO:0009581240.018
cellular response to organic cyclic compoundGO:0071407380.018
adherens junction organizationGO:003433240.018
cell matrix adhesionGO:000716040.018
response to oxygen containing compoundGO:1901700550.018
positive regulation of catabolic processGO:000989640.018
mesenchyme developmentGO:00604851270.017
synaptic growth at neuromuscular junctionGO:005112420.017
regulation of localizationGO:00328791040.017
epithelial cell developmentGO:0002064420.017
gland developmentGO:00487321430.017
microtubule based processGO:0007017600.017
regulation of synaptic growth at neuromuscular junctionGO:000858210.017
gliogenesisGO:0042063450.017
muscle tissue developmentGO:00605371100.017
regulation of biological qualityGO:00650082630.017
regulation of cellular macromolecule biosynthetic processGO:20001122220.017
regulation of epithelial cell proliferationGO:005067830.017
regulation of bindingGO:005109830.016
regulation of nucleoside metabolic processGO:000911820.016
regulation of anatomical structure morphogenesisGO:00226031300.016
protein heterooligomerizationGO:005129110.016
synaptic vesicle transportGO:004848910.016
negative regulation of intracellular transportGO:003238730.016
astrocyte differentiationGO:004870810.016
positive regulation of developmental processGO:0051094500.016
behaviorGO:0007610740.016
regulation of protein localization to nucleusGO:190018020.016
neurotransmitter transportGO:000683620.016
connective tissue developmentGO:0061448990.016
negative regulation of macromolecule metabolic processGO:0010605760.016
protein dephosphorylationGO:000647030.016
negative regulation of macromolecule biosynthetic processGO:0010558480.016
biological adhesionGO:0022610400.015
positive regulation of neural precursor cell proliferationGO:200017910.015
protein localization to nucleusGO:003450430.015
pigmentationGO:0043473850.015
negative regulation of cell differentiationGO:0045596460.015
positive regulation of canonical wnt signaling pathwayGO:009026340.015
endocrine system developmentGO:0035270650.015
transcription from rna polymerase ii promoterGO:0006366800.015
multicellular organismal macromolecule metabolic processGO:004425920.015
regulation of cellular component organizationGO:0051128860.015
negative regulation of epithelial cell proliferationGO:005068010.015
skeletal system developmentGO:00015011810.015
regulation of cellular component movementGO:0051270550.015
embryonic heart tube developmentGO:00350501330.015
digestive tract developmentGO:00485652650.015
intracellular signal transductionGO:0035556850.015
cell cell signalingGO:0007267520.015
embryo development ending in birth or egg hatchingGO:00097922710.015
male meiosisGO:000714020.015
guanosine containing compound catabolic processGO:190106920.015
internal protein amino acid acetylationGO:000647520.015
negative regulation of protein transportGO:005122430.015
embryonic organ developmentGO:00485683810.014
regulation of metal ion transportGO:001095940.014
negative regulation of cell projection organizationGO:003134590.014
protein complex biogenesisGO:0070271300.014
cell chemotaxisGO:0060326170.014
cell projection assemblyGO:0030031640.014
response to glucoseGO:000974930.014
detection of abiotic stimulusGO:0009582240.014
cell agingGO:000756920.014
positive regulation of secretionGO:005104710.014
system processGO:00030081850.014
phosphorus metabolic processGO:00067931090.014
positive regulation of cellular carbohydrate metabolic processGO:001067610.014
establishment of vesicle localizationGO:0051650240.014
nuclear exportGO:005116810.014
epithelial cell morphogenesisGO:000338220.014
positive regulation of biological processGO:00485182530.014
positive regulation of nucleotide catabolic processGO:003081310.013
phosphate containing compound metabolic processGO:00067961080.013
intracellular transportGO:0046907320.013
regulation of ion transportGO:0043269220.013
regulation of protein targetingGO:190353320.013
pole plasm assemblyGO:000731540.013
positive regulation of cytoskeleton organizationGO:005149530.013
protein targeting to nucleusGO:004474430.013
macromolecule localizationGO:0033036540.013
regulation of signal transductionGO:00099662250.013
tyrosine phosphorylation of stat proteinGO:000726010.013
regulation of nucleic acid templated transcriptionGO:19035062130.013
muscle organ developmentGO:00075171010.013
cell cycle processGO:0022402530.013
entrainment of circadian clock by photoperiodGO:004315310.013
regulation of nucleotide catabolic processGO:003081120.013
protein complex subunit organizationGO:0071822460.013
regulation of protein complex assemblyGO:004325430.012
regulation of rna biosynthetic processGO:20011412130.012
protein importGO:001703830.012
single organism membrane fusionGO:004480120.012
b cell activationGO:004211320.012
response to hexoseGO:000974630.012
cellular response to radiationGO:007147840.012
stem cell differentiationGO:00488631170.012
chromosome organizationGO:0051276310.012
renal system developmentGO:0072001940.012
anion transportGO:0006820380.012
response to lipidGO:0033993600.012
meiotic spindle organizationGO:000021210.012
gtp metabolic processGO:004603940.012
locomotor rhythmGO:004547530.012
regulation of catenin import into nucleusGO:003541220.012
organelle localizationGO:0051640490.012
detection of stimulus involved in sensory perceptionGO:0050906210.012
cell cycle g1 s phase transitionGO:004484310.012
multi organism cellular processGO:004476420.012
cardiac cell fate commitmentGO:006091110.012
cell cycle arrestGO:000705010.012
response to abiotic stimulusGO:00096281220.012
membrane fusionGO:006102520.012
positive regulation of gliogenesisGO:001401520.012
regulation of carbohydrate metabolic processGO:000610940.012
regulation of cellular component sizeGO:0032535300.012
negative regulation of synapse assemblyGO:005196420.012
negative regulation of defense responseGO:003134820.012
positive regulation of map kinase activityGO:004340630.012
regulation of cell communicationGO:00106462320.012
regulation of epithelial to mesenchymal transitionGO:001071730.012
proteolysis involved in cellular protein catabolic processGO:005160330.012
erk1 and erk2 cascadeGO:007037140.012
regulation of erk1 and erk2 cascadeGO:007037240.011
positive regulation of cellular metabolic processGO:0031325940.011
protein complex disassemblyGO:004324110.011
regulation of cellular response to growth factor stimulusGO:0090287350.011
gtp catabolic processGO:000618420.011
single organism intracellular transportGO:1902582250.011
cellular response to oxygen containing compoundGO:1901701200.011
signal transduction in absence of ligandGO:003803410.011
negative regulation of extrinsic apoptotic signaling pathwayGO:200123720.011
regulation of hormone secretionGO:004688320.011
regulation of transmembrane transporter activityGO:002289820.011
detection of stimulusGO:0051606290.011
regulation of cell cycleGO:0051726520.011
negative regulation of locomotionGO:0040013180.011
negative regulation of endothelial cell migrationGO:001059610.011
protein targeting to membraneGO:000661210.011
taxisGO:00423301090.011
fertilizationGO:000956630.011
cellular response to light stimulusGO:007148240.011
glycoprotein metabolic processGO:0009100230.011
positive regulation of stem cell proliferationGO:200064810.011
nuclear importGO:005117030.011
spindle assemblyGO:005122520.011
negative regulation of cell developmentGO:0010721260.011
negative regulation of protein localization to nucleusGO:190018120.011
positive regulation of cytokine productionGO:000181920.011
extracellular matrix organizationGO:0030198270.011
protein complex assemblyGO:0006461300.011
transmembrane receptor protein tyrosine kinase signaling pathwayGO:0007169420.011
cellular protein complex disassemblyGO:004362410.010
organelle assemblyGO:00709251100.010
glucose homeostasisGO:004259310.010
cell deathGO:00082191210.010
response to endogenous stimulusGO:0009719830.010
positive regulation of nitrogen compound metabolic processGO:0051173690.010
appendage developmentGO:0048736800.010
regulation of apoptotic processGO:0042981980.010
cell substrate adhesionGO:003158940.010
chordate embryonic developmentGO:00430092710.010
single organism biosynthetic processGO:0044711710.010
negative regulation of chemotaxisGO:005092240.010
anterior posterior pattern specificationGO:00099521520.010
lymph vessel developmentGO:0001945270.010
cartilage developmentGO:0051216960.010
growthGO:00400071740.010
cellular carbohydrate metabolic processGO:004426240.010
regulation of intracellular signal transductionGO:1902531570.010
fatty acid biosynthetic processGO:000663340.010
positive regulation of metabolic processGO:00098931080.010

lima1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.024
nervous system diseaseDOID:86300.023
disease of cellular proliferationDOID:1456600.018
cancerDOID:16200.015
organ system cancerDOID:005068600.015