Danio rerio

56 known processes

ush1c

Usher syndrome 1C (autosomal recessive, severe)

(Aliases: zgc:136806,MGC136806)

ush1c biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
inner ear developmentGO:00488391260.946
sensory organ developmentGO:00074233930.906
ear developmentGO:00435831270.832
detection of mechanical stimulus involved in sensory perceptionGO:0050974110.484
inner ear receptor cell differentiationGO:0060113290.419
detection of mechanical stimulusGO:0050982110.380
detection of stimulus involved in sensory perceptionGO:0050906210.356
detection of abiotic stimulusGO:0009582240.329
homeostatic processGO:00425921420.313
regulation of response to cytokine stimulusGO:006075930.307
ear morphogenesisGO:0042471640.267
equilibrioceptionGO:005095720.261
eye developmentGO:00016542770.258
inner ear receptor cell developmentGO:0060119200.256
sensory perception of mechanical stimulusGO:0050954160.237
inner ear receptor stereocilium organizationGO:006012280.225
reflexGO:006000420.220
inner ear morphogenesisGO:0042472630.211
eye morphogenesisGO:00485921440.192
epidermis developmentGO:0008544480.185
response to mechanical stimulusGO:0009612240.184
nonmotile primary cilium assemblyGO:003505820.181
neuron differentiationGO:00301823530.172
mechanoreceptor differentiationGO:0042490370.168
multicellular organism growthGO:003526440.161
positive regulation of transportGO:005105020.160
amino acid transportGO:000686520.147
system processGO:00030081850.146
sensory perception of soundGO:000760590.142
embryonic organ developmentGO:00485683810.139
digestive tract developmentGO:00485652650.129
detection of stimulusGO:0051606290.126
neuron developmentGO:00486662620.126
hair cell differentiationGO:0035315320.121
single organism localizationGO:19025782250.120
regulation of biological qualityGO:00650082630.116
detection of external stimulusGO:0009581240.114
sensory organ morphogenesisGO:00905962000.113
regulation of cell communicationGO:00106462320.112
single organism metabolic processGO:00447102170.110
inorganic ion transmembrane transportGO:0098660570.108
exocytosisGO:000688710.105
ion transmembrane transportGO:0034220910.105
fat soluble vitamin metabolic processGO:000677540.101
carboxylic acid transportGO:004694280.100
determination of bilateral symmetryGO:00098552040.098
ion transportGO:00068111140.096
establishment of localizationGO:00512342440.095
dicarboxylic acid transportGO:000683510.095
organelle localizationGO:0051640490.093
neuromuscular process controlling balanceGO:005088530.089
positive regulation of secretion by cellGO:190353210.088
morphogenesis of an epitheliumGO:00020093330.086
synaptic vesicle transportGO:004848910.082
otolith developmentGO:0048840320.081
photoreceptor cell differentiationGO:0046530550.081
cilium morphogenesisGO:0060271850.079
retina homeostasisGO:0001895120.078
neurotransmitter transportGO:000683620.078
transmembrane transportGO:00550851200.078
embryonic skeletal system morphogenesisGO:0048704930.078
eye photoreceptor cell differentiationGO:0001754450.077
otic vesicle developmentGO:0071599420.076
single organism organelle organizationGO:19025891990.076
generation of neuronsGO:00486993850.076
cell projection organizationGO:00300302840.074
fat soluble vitamin biosynthetic processGO:004236220.072
purine nucleoside monophosphate catabolic processGO:000912840.070
epithelial cell differentiationGO:00308551160.070
cell motilityGO:00488702440.069
regulation of vitamin metabolic processGO:003065660.068
regulation of establishment of protein localizationGO:007020140.066
auditory receptor cell morphogenesisGO:000209340.066
detection of mechanical stimulus involved in sensory perception of soundGO:005091030.066
response to external stimulusGO:00096052640.065
establishment of organelle localizationGO:0051656450.064
erythrocyte homeostasisGO:0034101550.063
response to abiotic stimulusGO:00096281220.063
organelle organizationGO:00069962270.062
transportGO:00068102200.060
cellular response to extracellular stimulusGO:003166820.060
ribonucleoside monophosphate catabolic processGO:000915840.060
adult behaviorGO:003053420.059
neurotransmitter secretionGO:000726920.059
locomotionGO:00400113130.058
somitogenesisGO:0001756870.057
vestibular reflexGO:006000520.057
regulation of multicellular organism growthGO:004001440.057
regulation of retina development in camera type eyeGO:190286620.056
photoreceptor cell developmentGO:0042461400.056
toll like receptor signaling pathwayGO:000222440.055
single organism transportGO:00447652060.055
larval developmentGO:000216420.054
establishment of synaptic vesicle localizationGO:009748010.051
post embryonic organ developmentGO:004856940.050
transmission of nerve impulseGO:0019226190.050
organic substance biosynthetic processGO:19015762890.050
negative regulation of reproductive processGO:200024230.050
vasculature developmentGO:00019442780.049
response to drugGO:004249330.049
macroautophagyGO:001623610.048
cellular component disassemblyGO:002241110.048
camera type eye morphogenesisGO:00485931080.047
regionalizationGO:00030022740.047
heart developmentGO:00075073130.047
purine ribonucleoside monophosphate catabolic processGO:000916940.047
positive regulation of secretionGO:005104710.046
response to bacteriumGO:0009617580.045
regulation of response to oxidative stressGO:190288220.045
regulation of synaptic plasticityGO:004816710.045
regulation of neural retina developmentGO:006107420.045
homeostasis of number of cellsGO:0048872620.044
signal transductionGO:00071654550.042
stem cell divisionGO:001714510.041
retina development in camera type eyeGO:00600411460.041
negative regulation of biological processGO:00485193040.041
cellular component assembly involved in morphogenesisGO:00109271070.040
detection of light stimulusGO:0009583120.040
organelle fusionGO:004828430.040
skin developmentGO:0043588540.040
embryonic hemopoiesisGO:0035162530.040
specification of organ identityGO:001009220.040
neurological system processGO:0050877620.039
nucleoside monophosphate catabolic processGO:000912540.039
embryonic organ morphogenesisGO:00485622740.039
macromolecular complex disassemblyGO:003298410.038
small molecule metabolic processGO:0044281770.038
cellular response to lipopolysaccharideGO:007122230.038
neuromast developmentGO:0048884460.038
regulation of multicellular organismal processGO:00512392770.038
regulation of synaptic growth at neuromuscular junctionGO:000858210.037
erythrocyte differentiationGO:0030218540.037
cellular response to chemical stimulusGO:00708871570.037
cellular aromatic compound metabolic processGO:00067252950.036
regulation of transmembrane transporter activityGO:002289820.036
sensory system developmentGO:0048880760.036
establishment of vesicle localizationGO:0051650240.036
sensory perceptionGO:0007600390.036
response to radiationGO:0009314510.036
epidermal cell differentiationGO:0009913360.036
cellular response to external stimulusGO:007149620.036
cilium organizationGO:0044782710.035
macromolecular complex subunit organizationGO:0043933740.035
lipid storageGO:001991510.034
regulation of reproductive processGO:200024140.033
regulation of localizationGO:00328791040.033
hormone secretionGO:004687920.033
cellular macromolecule metabolic processGO:00442603910.033
anion transportGO:0006820380.033
regulation of metabolic processGO:00192223590.033
organic substance transportGO:0071702580.032
cellular localizationGO:0051641970.032
single organism membrane fusionGO:004480120.031
spermatid developmentGO:000728620.031
cellular component biogenesisGO:00440851780.031
neuron neuron synaptic transmissionGO:000727010.031
agingGO:000756820.031
peripheral nervous system developmentGO:0007422550.031
cellular response to light stimulusGO:007148240.030
atp catabolic processGO:000620040.030
protein complex disassemblyGO:004324110.030
locomotory behaviorGO:0007626340.030
photoreceptor cell outer segment organizationGO:003584590.030
establishment of localization in cellGO:0051649770.030
visual perceptionGO:0007601170.030
nitrogen compound transportGO:0071705230.030
auditory receptor cell developmentGO:006011780.029
anion transmembrane transportGO:0098656120.028
regulation of cytokine mediated signaling pathwayGO:000195930.028
specification of symmetryGO:00097992040.028
myeloid cell differentiationGO:0030099860.028
cellular amine metabolic processGO:004410620.028
neuromast primordium migrationGO:0048883120.028
cytoskeleton organizationGO:0007010960.027
posterior lateral line system developmentGO:0048915460.027
heterocycle metabolic processGO:00464832900.026
cell projection assemblyGO:0030031640.026
cardiac atrium morphogenesisGO:000320920.025
actin filament based processGO:0030029640.025
cell migrationGO:00164772370.025
regulation of circadian rhythmGO:004275240.025
startle responseGO:000196440.024
regulation of signalingGO:00230512350.024
nucleus organizationGO:000699770.024
immune system processGO:00023762410.024
cellular response to biotic stimulusGO:007121630.024
synaptic vesicle localizationGO:009747910.024
determination of left right symmetryGO:00073681790.024
localization of cellGO:00516742440.024
autophagyGO:000691440.024
epithelial cell morphogenesisGO:000338220.023
regulation of muscle contractionGO:000693730.023
retina morphogenesis in camera type eyeGO:0060042790.023
cellular response to molecule of bacterial originGO:007121930.023
somatic muscle developmentGO:000752540.023
hematopoietic or lymphoid organ developmentGO:00485341910.023
maintenance of locationGO:005123540.023
gene expressionGO:00104672520.023
striated muscle cell developmentGO:00550021080.023
cation transmembrane transportGO:0098655650.023
cellular response to nutrient levelsGO:003166920.023
retinal rod cell developmentGO:004654840.023
organelle assemblyGO:00709251100.022
embryonic pattern specificationGO:0009880440.022
regulation of response to stimulusGO:00485832690.022
homeostasis of number of cells within a tissueGO:004887340.022
regulation of developmental processGO:00507932470.022
response to stressGO:00069502630.022
regulation of ion transmembrane transporter activityGO:003241220.022
action potentialGO:0001508190.022
striated muscle cell differentiationGO:00511461290.022
inorganic cation transmembrane transportGO:0098662500.022
regulation of signal transductionGO:00099662250.022
alcohol biosynthetic processGO:004616520.021
actin cytoskeleton organizationGO:0030036630.021
golgi organizationGO:000703010.021
digestive system developmentGO:00551232890.021
negative regulation of multicellular organismal processGO:0051241690.021
regulation of gene expressionGO:00104682650.021
membrane fusionGO:006102520.021
embryonic viscerocranium morphogenesisGO:0048703520.021
regulation of behaviorGO:0050795240.020
synaptic vesicle endocytosisGO:004848810.020
cellular biosynthetic processGO:00442492860.020
regulation of protein complex disassemblyGO:004324410.020
cellular response to starvationGO:000926710.020
hormone transportGO:000991420.020
eye photoreceptor cell developmentGO:0042462300.020
rna biosynthetic processGO:00327741810.020
amine metabolic processGO:000930820.020
neuron projection developmentGO:00311751800.020
cellular response to organic substanceGO:00713101050.020
semicircular canal developmentGO:0060872240.020
cellular protein complex disassemblyGO:004362410.019
compound eye developmentGO:004874920.019
synaptic vesicle recyclingGO:003646510.019
anatomical structure homeostasisGO:0060249360.019
cellular carbohydrate metabolic processGO:004426240.019
head developmentGO:00603223030.019
nitrogen compound metabolic processGO:00068073190.019
response to biotic stimulusGO:0009607970.019
response to hydrogen peroxideGO:004254230.018
cellular nitrogen compound metabolic processGO:00346412900.018
spermatid differentiationGO:004851520.018
regulation of alcohol biosynthetic processGO:190293010.018
auditory receptor cell differentiationGO:0042491150.018
regulation of catalytic activityGO:0050790550.018
regulation of molecular functionGO:0065009700.018
regulation of transporter activityGO:003240920.018
phagocytosisGO:000690930.018
vestibular receptor cell developmentGO:006011830.018
positive regulation of cellular catabolic processGO:003133130.018
multicellular organismal homeostasisGO:0048871290.018
g protein coupled receptor signaling pathwayGO:0007186740.018
pancreas developmentGO:0031016840.018
multi organism processGO:00517041340.017
negative regulation of neuron projection developmentGO:001097790.017
actin filament based movementGO:003004810.017
negative regulation of cellular processGO:00485232830.017
response to salt stressGO:0009651100.017
organic cyclic compound metabolic processGO:19013603010.017
cardiac atrium developmentGO:000323040.017
multicellular organismal signalingGO:0035637220.017
vitamin biosynthetic processGO:000911020.017
regulation of cellular ketone metabolic processGO:001056570.017
cellular ketone metabolic processGO:0042180110.017
cilium assemblyGO:0042384580.017
single organism biosynthetic processGO:0044711710.017
response to light stimulusGO:0009416460.017
cellular component assemblyGO:00226071700.017
organelle transport along microtubuleGO:007238410.016
regulation of locomotionGO:0040012550.016
otic vesicle morphogenesisGO:0071600340.016
regulation of macromolecule metabolic processGO:00602553170.016
regulation of organelle assemblyGO:190211540.016
aorta morphogenesisGO:003590930.016
regulation of response to stressGO:0080134360.016
transcription from rna polymerase ii promoterGO:0006366800.016
protein secretionGO:000930610.016
tube morphogenesisGO:00352393490.016
lateral line system developmentGO:0048925760.016
organophosphate metabolic processGO:0019637370.016
maintenance of gastrointestinal epitheliumGO:003027770.016
camera type eye photoreceptor cell differentiationGO:0060219190.016
pronephros morphogenesisGO:0072114140.016
cellular response to topologically incorrect proteinGO:003596720.016
muscle cell developmentGO:00550011150.015
negative regulation of response to stimulusGO:00485851040.015
behaviorGO:0007610740.015
macromolecule biosynthetic processGO:00090592270.015
response to other organismGO:0051707970.015
endocytosisGO:0006897160.015
circadian sleep wake cycle sleepGO:005080210.015
immune system developmentGO:00025201910.015
post embryonic organ morphogenesisGO:004856310.015
protein localization to plasma membraneGO:007265910.015
regulation of neuronal synaptic plasticityGO:004816810.015
cellular pigmentationGO:0033059300.015
segmentationGO:0035282970.015
myeloid cell homeostasisGO:0002262560.015
synaptic transmissionGO:0007268350.015
nucleobase containing compound biosynthetic processGO:00346542050.015
response to alkaloidGO:004327920.015
polarized epithelial cell differentiationGO:003085940.015
metal ion transportGO:0030001580.015
negative regulation of synapse assemblyGO:005196420.014
regulation of blood vessel sizeGO:005088020.014
pronephros developmentGO:0048793690.014
cation transportGO:0006812810.014
anterior posterior pattern specificationGO:00099521520.014
cellular component movementGO:00069283350.014
mechanosensory behaviorGO:000763820.014
positive regulation of innate immune responseGO:004508980.014
primary neural tube formationGO:001402010.014
regulation of synapse organizationGO:005080730.014
cellular component morphogenesisGO:00329893360.014
sodium ion transmembrane transportGO:0035725210.014
tissue remodelingGO:004877140.014
microtubule based processGO:0007017600.014
positive regulation of response to stimulusGO:0048584800.014
endoplasmic reticulum unfolded protein responseGO:003096820.014
sensory perception of light stimulusGO:0050953190.014
positive regulation of exocytosisGO:004592110.014
heart morphogenesisGO:00030071560.014
regulation of oxidative stress induced cell deathGO:190320120.014
lipid biosynthetic processGO:0008610220.014
developmental maturationGO:0021700340.014
sodium ion transportGO:0006814240.014
negative regulation of secretionGO:005104820.014
synaptic growth at neuromuscular junctionGO:005112420.014
organic acid metabolic processGO:0006082310.013
positive regulation of catabolic processGO:000989640.013
macromolecule localizationGO:0033036540.013
response to chemicalGO:00422213200.013
protein polymerizationGO:005125840.013
stem cell proliferationGO:007208940.013
regulation of sodium ion transmembrane transportGO:190230510.013
protein targeting to membraneGO:000661210.013
positive regulation of epithelial cell proliferationGO:005067910.013
rna metabolic processGO:00160702190.013
biosynthetic processGO:00090582940.013
cellular response to stressGO:0033554620.013
vitamin metabolic processGO:0006766110.013
regulation of cellular component organizationGO:0051128860.013
regulation of cellular amine metabolic processGO:003323800.013
regulation of protein transportGO:005122330.013
golgi vesicle transportGO:004819330.013
renal system developmentGO:0072001940.013
cell projection morphogenesisGO:00488582440.013
establishment of epithelial cell apical basal polarityGO:004519820.013
skeletal system developmentGO:00015011810.013
response to starvationGO:004259450.013
hemopoiesisGO:00300971830.013
phototransductionGO:000760220.013
cellular amino acid metabolic processGO:000652070.012
gtp catabolic processGO:000618420.012
response to glucoseGO:000974930.012
zymogen activationGO:003163830.012
regulation of macromolecule biosynthetic processGO:00105562250.012
neural retina developmentGO:0003407490.012
hindbrain formationGO:002157630.012
oxoacid metabolic processGO:0043436310.012
regulation of synapse assemblyGO:005196330.012
heterophilic cell cell adhesion via plasma membrane cell adhesion moleculesGO:000715720.012
toxin transportGO:190199820.012
artery morphogenesisGO:0048844140.012
rhythmic processGO:0048511210.012
positive regulation of nucleoside metabolic processGO:004597910.012
regulation of membrane potentialGO:0042391230.012
regulation of organ growthGO:004662030.012
regulation of epidermis developmentGO:004568220.012
somite developmentGO:0061053960.012
positive regulation of biological processGO:00485182530.012
establishment of protein localization to plasma membraneGO:009000210.012
organic acid transportGO:001584990.012
alcohol metabolic processGO:0006066110.012
regulation of protein modification by small protein conjugation or removalGO:190332030.012
organonitrogen compound metabolic processGO:1901564740.012
negative regulation of multi organism processGO:004390130.011
purine containing compound biosynthetic processGO:0072522200.011
response to unfolded proteinGO:000698620.011
camera type eye developmentGO:00430102220.011
cellular response to unfolded proteinGO:003462020.011
endosomal transportGO:001619720.011
rhodopsin mediated signaling pathwayGO:001605610.011
positive regulation of synapse assemblyGO:005196510.011
gtp metabolic processGO:004603940.011
lateral line developmentGO:0048882660.011
regulation of cellular response to oxidative stressGO:190040720.011
actin polymerization or depolymerizationGO:000815420.011
protein depolymerizationGO:005126110.011
response to light intensityGO:000964210.011
regulation of membrane repolarizationGO:006030610.011
phosphate containing compound metabolic processGO:00067961080.011
production of molecular mediator of immune responseGO:000244020.011
tissue homeostasisGO:0001894250.011
actin filament organizationGO:0007015150.011
muscle structure developmentGO:00610611960.011
nucleic acid metabolic processGO:00903042440.010
proepicardium developmentGO:000334240.010
aorta developmentGO:003590440.010
brain developmentGO:00074202930.010
lipid metabolic processGO:0006629520.010
regulation of response to extracellular stimulusGO:003210410.010
regulation of protein bindingGO:004339330.010
cell morphogenesisGO:00009022890.010
positive regulation of muscle organ developmentGO:004863610.010
modification dependent protein catabolic processGO:001994130.010
anterior lateral line nerve developmentGO:004890940.010
organic anion transportGO:0015711150.010
regulation of apoptotic processGO:0042981980.010

ush1c disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.252
nonsyndromic deafnessDOID:005056300.222
sensory system diseaseDOID:005015500.222
auditory system diseaseDOID:274200.222
nervous system diseaseDOID:86300.222
immune system diseaseDOID:291400.084
hematopoietic system diseaseDOID:7400.084
autosomal dominant nonsyndromic deafnessDOID:005056400.011