Danio rerio

58 known processes

usp39

ubiquitin specific peptidase 39

(Aliases: zgc:158428,wu:fb54d10,wu:fb79f05)

usp39 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
agingGO:000756820.083
larval developmentGO:000216420.081
Worm
nuclear transportGO:005116940.071
positive regulation of transportGO:005105020.071
central nervous system developmentGO:00074173870.067
response to chemicalGO:00422213200.067
single organism nuclear importGO:190259330.066
cellular nitrogen compound metabolic processGO:00346412900.066
head developmentGO:00603223030.062
sensory organ developmentGO:00074233930.062
protein importGO:001703830.057
cellular biosynthetic processGO:00442492860.056
regulation of cytokine productionGO:000181730.056
regulation of metabolic processGO:00192223590.055
organelle organizationGO:00069962270.055
nitrogen compound metabolic processGO:00068073190.054
regulation of nucleobase containing compound metabolic processGO:00192192500.054
phagocytosisGO:000690930.053
eye developmentGO:00016542770.052
nucleic acid metabolic processGO:00903042440.051
brain developmentGO:00074202930.051
generation of neuronsGO:00486993850.051
cellular nitrogen compound biosynthetic processGO:00442712180.049
protein import into nucleusGO:000660630.049
heterocycle biosynthetic processGO:00181302150.048
protein localization to nucleusGO:003450430.048
establishment of protein localization to organelleGO:007259440.048
hematopoietic or lymphoid organ developmentGO:00485341910.046
amino acid transportGO:000686520.046
regulation of establishment of protein localizationGO:007020140.045
regulation of biological qualityGO:00650082630.045
organic cyclic compound biosynthetic processGO:19013622230.045
signal transductionGO:00071654550.044
multicellular organism growthGO:003526440.043
organic substance biosynthetic processGO:19015762890.043
gene expressionGO:00104672520.043
cell morphogenesisGO:00009022890.042
retina development in camera type eyeGO:00600411460.042
regulation of cellular biosynthetic processGO:00313262450.042
heterocycle metabolic processGO:00464832900.042
sensory organ morphogenesisGO:00905962000.041
regulation of transcription dna templatedGO:00063552130.041
nucleobase containing compound biosynthetic processGO:00346542050.041
aromatic compound biosynthetic processGO:00194382170.041
nucleocytoplasmic transportGO:000691340.040
biosynthetic processGO:00090582940.040
regulation of biosynthetic processGO:00098892500.040
regulation of neurotransmitter transportGO:005158810.039
proteolysis involved in cellular protein catabolic processGO:005160330.038
regulation of cellular metabolic processGO:00313233200.038
positive regulation of catabolic processGO:000989640.038
anterior posterior pattern specificationGO:00099521520.038
positive regulation of cellular catabolic processGO:003133130.037
nuclear importGO:005117030.037
protein targeting to nucleusGO:004474430.037
positive regulation of nitrogen compound metabolic processGO:0051173690.036
ubiquitin dependent protein catabolic processGO:000651130.036
organic cyclic compound metabolic processGO:19013603010.036
neuron differentiationGO:00301823530.035
transmembrane transportGO:00550851200.035
heart developmentGO:00075073130.035
rna biosynthetic processGO:00327741810.035
neurotransmitter transportGO:000683620.035
hemopoiesisGO:00300971830.035
amine metabolic processGO:000930820.035
system processGO:00030081850.034
cellular response to lipopolysaccharideGO:007122230.034
regulation of nitrogen compound metabolic processGO:00511712510.034
modification dependent macromolecule catabolic processGO:004363230.034
regionalizationGO:00030022740.034
regulation of protein transportGO:005122330.034
positive regulation of cytokine productionGO:000181920.034
blood vessel developmentGO:00015682460.034
immune system processGO:00023762410.034
regulation of gene expressionGO:00104682650.033
positive regulation of biological processGO:00485182530.033
regulation of signal transductionGO:00099662250.033
positive regulation of cellular processGO:00485222010.033
morphogenesis of an epitheliumGO:00020093330.033
meiotic nuclear divisionGO:000712640.033
cellular aromatic compound metabolic processGO:00067252950.033
nucleobase containing compound metabolic processGO:00061392740.033
organonitrogen compound metabolic processGO:1901564740.033
regulation of macromolecule metabolic processGO:00602553170.033
macromolecule biosynthetic processGO:00090592270.032
cellular macromolecule biosynthetic processGO:00346452240.032
locomotionGO:00400113130.032
Worm
response to drugGO:004249330.032
regulation of synaptic plasticityGO:004816710.032
regulation of bindingGO:005109830.032
response to external stimulusGO:00096052640.032
regulation of multicellular organism growthGO:004001440.031
immune system developmentGO:00025201910.031
gtp catabolic processGO:000618420.031
cellular component morphogenesisGO:00329893360.031
regulation of cellular amine metabolic processGO:003323800.031
female gonad developmentGO:000858540.030
single organism localizationGO:19025782250.030
regulation of primary metabolic processGO:00800903110.030
tube morphogenesisGO:00352393490.030
regulation of neurotransmitter secretionGO:004692810.030
transportGO:00068102200.030
Worm
ion transportGO:00068111140.030
guanosine containing compound metabolic processGO:190106840.029
maintenance of locationGO:005123540.029
cellular response to molecule of bacterial originGO:007121930.029
stem cell maintenanceGO:001982740.029
small molecule metabolic processGO:0044281770.029
positive regulation of secretionGO:005104710.029
single organism biosynthetic processGO:0044711710.029
stem cell proliferationGO:007208940.028
regulation of metal ion transportGO:001095940.028
cell morphogenesis involved in differentiationGO:00009041950.028
regulation of circadian rhythmGO:004275240.028
female sex differentiationGO:004666040.028
cellular response to external stimulusGO:007149620.028
single organism organelle organizationGO:19025891990.028
camera type eye developmentGO:00430102220.028
neurotransmitter secretionGO:000726920.028
regulation of signalingGO:00230512350.028
cellular macromolecule metabolic processGO:00442603910.028
sleepGO:003043110.027
cell surface receptor signaling pathwayGO:00071663250.027
extrinsic apoptotic signaling pathwayGO:009719130.027
cellular amine metabolic processGO:004410620.027
single organism metabolic processGO:00447102170.027
negative regulation of kinase activityGO:003367340.027
autophagyGO:000691440.027
mitochondrion organizationGO:000700540.027
regulation of sodium ion transportGO:000202820.026
regulation of cellular macromolecule biosynthetic processGO:20001122220.026
regulation of nucleic acid templated transcriptionGO:19035062130.026
regulation of protein import into nucleusGO:004230620.026
response to stressGO:00069502630.026
positive regulation of dna metabolic processGO:005105410.026
adult behaviorGO:003053420.026
rna metabolic processGO:00160702190.026
regulation of protein catabolic processGO:004217610.026
protein metabolic processGO:00195381830.026
nucleic acid templated transcriptionGO:00976591810.026
development of primary female sexual characteristicsGO:004654540.025
positive regulation of apoptotic signaling pathwayGO:200123510.025
multi organism processGO:00517041340.025
embryonic organ developmentGO:00485683810.025
regulation of muscle contractionGO:000693730.025
regulation of rna metabolic processGO:00512522240.025
cellular carbohydrate metabolic processGO:004426240.025
regulation of cytoplasmic transportGO:190364940.025
blood vessel morphogenesisGO:00485142160.025
regulation of nucleocytoplasmic transportGO:004682220.025
negative regulation of biological processGO:00485193040.025
response to uvGO:000941130.024
lipid storageGO:001991510.024
regulation of intracellular protein transportGO:003315730.024
dicarboxylic acid transportGO:000683510.024
vasculature developmentGO:00019442780.024
segmentationGO:0035282970.024
b cell activationGO:004211320.024
proteasomal protein catabolic processGO:001049820.024
activation of mapk activityGO:000018730.024
response to alkaloidGO:004327920.024
negative regulation of catabolic processGO:000989530.024
regulation of extrinsic apoptotic signaling pathwayGO:200123630.024
inner ear developmentGO:00488391260.024
single organism membrane fusionGO:004480120.024
synaptic growth at neuromuscular junctionGO:005112420.024
negative regulation of cytokine productionGO:000181810.023
meiotic chromosome segregationGO:004513230.023
regulation of protein localization to nucleusGO:190018020.023
regulation of gtp catabolic processGO:003312420.023
cytosolic calcium ion transportGO:006040130.023
cellular protein catabolic processGO:004425740.023
regulation of protein targetingGO:190353320.023
cell cycle g2 m phase transitionGO:004483940.023
regulation of synaptic growth at neuromuscular junctionGO:000858210.023
negative regulation of protein serine threonine kinase activityGO:007190120.023
sequestering of calcium ionGO:005120830.023
positive regulation of map kinase activityGO:004340630.023
regulation of cell activationGO:005086510.023
regulation of reactive oxygen species metabolic processGO:200037720.023
multicellular organismal signalingGO:0035637220.023
negative regulation of protein phosphorylationGO:000193340.023
gtp metabolic processGO:004603940.022
dorsal ventral pattern formationGO:00099531250.022
digestive tract morphogenesisGO:00485462310.022
anion transportGO:0006820380.022
regulation of cellular amino acid metabolic processGO:000652100.022
homeostatic processGO:00425921420.022
positive regulation of cytosolic calcium ion concentrationGO:000720440.022
adherens junction organizationGO:003433240.022
hormone secretionGO:004687920.022
circadian sleep wake cycle sleepGO:005080210.022
regulation of multicellular organismal processGO:00512392770.022
eye morphogenesisGO:00485921440.022
i kappab kinase nf kappab signalingGO:000724940.022
meiotic cell cycle processGO:190304630.022
regulation of stem cell differentiationGO:200073640.022
phagocytosis engulfmentGO:000691110.022
cellular component movementGO:00069283350.022
regulation of macromolecule biosynthetic processGO:00105562250.022
peptide transportGO:001583310.021
negative regulation of cellular processGO:00485232830.021
cognitionGO:005089010.021
membrane fusionGO:006102520.021
regulation of response to stimulusGO:00485832690.021
regulation of multicellular organismal developmentGO:20000262230.021
post embryonic organ developmentGO:004856940.021
mitotic dna integrity checkpointGO:004477440.021
compound eye developmentGO:004874920.021
cellular response to starvationGO:000926710.021
production of molecular mediator of immune responseGO:000244020.021
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.021
internal peptidyl lysine acetylationGO:001839320.021
axonogenesisGO:00074091520.021
cell projection morphogenesisGO:00488582440.021
cell morphogenesis involved in neuron differentiationGO:00486671630.021
organic acid metabolic processGO:0006082310.021
positive regulation of cellular component biogenesisGO:004408930.021
rna localizationGO:000640340.021
regulation of nucleoside metabolic processGO:000911820.021
negative regulation of protein kinase activityGO:000646940.021
establishment of localizationGO:00512342440.020
Worm
guanosine containing compound catabolic processGO:190106920.020
catechol containing compound metabolic processGO:000971220.020
angiogenesisGO:00015251580.020
cellular response to extracellular stimulusGO:003166820.020
internal protein amino acid acetylationGO:000647520.020
regulation of purine nucleotide catabolic processGO:003312120.020
camera type eye morphogenesisGO:00485931080.020
cytoplasm organizationGO:000702840.020
regulation of cell communicationGO:00106462320.020
transcription dna templatedGO:00063511810.020
regulation of blood pressureGO:000821710.020
cilium morphogenesisGO:0060271850.020
regulation of neurological system processGO:003164420.020
response to light stimulusGO:0009416460.020
chemosensory behaviorGO:000763510.020
peptidyl lysine acetylationGO:001839420.020
cellular response to biotic stimulusGO:007121630.020
regulation of nucleotide catabolic processGO:003081120.020
protein dephosphorylationGO:000647030.020
circadian sleep wake cycleGO:004274520.020
regulation of carbohydrate metabolic processGO:000610940.019
facial nerve morphogenesisGO:002161010.019
catecholamine metabolic processGO:000658420.019
exocytosisGO:000688710.019
purine ribonucleoside monophosphate catabolic processGO:000916940.019
modification dependent protein catabolic processGO:001994130.019
single organism transportGO:00447652060.019
synaptic vesicle localizationGO:009747910.019
neuron developmentGO:00486662620.019
regulation of cellular ketone metabolic processGO:001056570.019
atp catabolic processGO:000620040.019
central nervous system neuron differentiationGO:0021953740.019
protein acetylationGO:000647320.019
carboxylic acid metabolic processGO:0019752220.019
extrinsic apoptotic signaling pathway in absence of ligandGO:009719210.019
positive regulation of cellular amine metabolic processGO:003324000.019
oxoacid metabolic processGO:0043436310.019
hormone transportGO:000991420.019
cellular ketone metabolic processGO:0042180110.019
cellular component disassemblyGO:002241110.019
myeloid cell differentiationGO:0030099860.019
positive regulation of purine nucleotide catabolic processGO:003312310.019
signal transduction in absence of ligandGO:003803410.019
cell part morphogenesisGO:00329902460.019
mitochondrial transportGO:000683920.018
pole plasm assemblyGO:000731540.018
regulation of reproductive processGO:200024140.018
ribonucleoside monophosphate catabolic processGO:000915840.018
carbohydrate biosynthetic processGO:001605110.018
regulation of i kappab kinase nf kappab signalingGO:004312240.018
positive regulation of secretion by cellGO:190353210.018
axon developmentGO:00615641660.018
cellular amino acid metabolic processGO:000652070.018
regulation of cell shapeGO:000836010.018
synaptic vesicle transportGO:004848910.018
negative regulation of myeloid cell differentiationGO:004563810.018
b cell differentiationGO:003018310.018
positive regulation of cell cycleGO:004578730.018
negative regulation of map kinase activityGO:004340720.018
neuron neuron synaptic transmissionGO:000727010.018
regulation of stem cell proliferationGO:007209120.018
apoptotic processGO:00069151160.018
spermatid developmentGO:000728620.018
oocyte anterior posterior axis specificationGO:000731440.018
regulation of ion transmembrane transporter activityGO:003241220.018
localization of cellGO:00516742440.018
cellular pigmentationGO:0033059300.018
membrane invaginationGO:001032410.018
maternal determination of anterior posterior axis embryoGO:000835840.018
circadian sleep wake cycle processGO:002241020.018
ear developmentGO:00435831270.018
embryo development ending in birth or egg hatchingGO:00097922710.018
Worm
positive regulation of stress activated protein kinase signaling cascadeGO:007030430.018
regulation of sequestering of calcium ionGO:005128240.018
chordate embryonic developmentGO:00430092710.018
positive regulation of cytoskeleton organizationGO:005149530.017
regulation of circadian sleep wake cycleGO:004274910.017
regulation of phGO:000688530.017
gastrulationGO:00073692080.017
cellular amide metabolic processGO:004360340.017
regulation of endocrine processGO:004406020.017
regulation of autophagyGO:001050630.017
organelle fusionGO:004828430.017
regulation of inflammatory responseGO:005072720.017
cellular response to nutrient levelsGO:003166920.017
regulation of cellular carbohydrate metabolic processGO:001067540.017
carbon dioxide transportGO:001567030.017
cell motilityGO:00488702440.017
sequestering of metal ionGO:005123830.017
regulation of meiotic cell cycleGO:005144510.017
regulation of developmental processGO:00507932470.017
calcium ion transport into cytosolGO:006040230.017
protein secretionGO:000930610.017
regulation of synapse assemblyGO:005196330.017
intracellular mrna localizationGO:000829810.017
macromolecular complex disassemblyGO:003298410.017
peptide metabolic processGO:000651810.017
phosphatidylinositol 3 kinase signalingGO:001406520.017
somite developmentGO:0061053960.017
regulation of hormone secretionGO:004688320.017
positive regulation of nucleotide catabolic processGO:003081310.016
developmental programmed cell deathGO:001062340.016
regulation of cellular phGO:003064110.016
endocrine processGO:005088620.016
regulation of blood vessel sizeGO:005088020.016
regulation of tube sizeGO:003515020.016
regulation of transcription from rna polymerase ii promoterGO:00063571140.016
regulation of transmembrane transporter activityGO:002289820.016
actin filament based movementGO:003004810.016
regulation of programmed cell deathGO:00430671010.016
startle responseGO:000196440.016
glial cell migrationGO:000834730.016
protein acylationGO:004354330.016
cation transmembrane transportGO:0098655650.016
regulation of production of molecular mediator of immune responseGO:000270010.016
positive regulation of immune effector processGO:000269930.016
negative regulation of cytoplasmic transportGO:190365020.016
inositol lipid mediated signalingGO:004801720.016
centrosome organizationGO:005129710.016
regulation of neural precursor cell proliferationGO:200017730.016
regulation of neuronal synaptic plasticityGO:004816810.016
protein localization to plasma membraneGO:007265910.016
muscle structure developmentGO:00610611960.016
protein complex disassemblyGO:004324110.016
response to carbohydrateGO:000974330.016
peptidyl serine phosphorylationGO:001810510.016
digestive tract developmentGO:00485652650.016
regulation of protein ubiquitinationGO:003139630.016
nucleoside monophosphate catabolic processGO:000912540.015
purine nucleoside monophosphate catabolic processGO:000912840.015
positive regulation of nucleoside metabolic processGO:004597910.015
positive regulation of nucleobase containing compound metabolic processGO:0045935690.015
macromolecule modificationGO:00434121110.015
somatic stem cell maintenanceGO:003501910.015
positive regulation of cellular amino acid metabolic processGO:004576400.015
homeostasis of number of cellsGO:0048872620.015
positive regulation of blood circulationGO:190352420.015
germ line stem cell maintenanceGO:003071820.015
cell cycle g1 s phase transitionGO:004484310.015
homeostasis of number of cells within a tissueGO:004887340.015
somitogenesisGO:0001756870.015
response to external biotic stimulusGO:0043207970.015
regulation of peptidyl tyrosine phosphorylationGO:005073010.015
cell projection organizationGO:00300302840.015
translational initiationGO:000641330.015
regulation of rna biosynthetic processGO:20011412130.015
establishment of localization in cellGO:0051649770.015
positive regulation of cell adhesionGO:004578510.015
programmed cell deathGO:00125011190.015
regulation of transporter activityGO:003240920.015
regulation of mrna processingGO:005068430.015
sympathetic nervous system developmentGO:004848530.015
positive regulation of gtp catabolic processGO:003312610.015
specification of symmetryGO:00097992040.015
response to topologically incorrect proteinGO:003596620.014
one carbon compound transportGO:0019755140.014
regulation of glial cell differentiationGO:004568540.014
cellular localizationGO:0051641970.014
negative regulation of secretion by cellGO:190353120.014
mesoderm developmentGO:0007498880.014
monovalent inorganic cation transportGO:0015672420.014
spermatid differentiationGO:004851520.014
secondary metabolic processGO:001974830.014
response to amino acidGO:004320020.014
energy reserve metabolic processGO:000611220.014
astrocyte differentiationGO:004870810.014
regulation of circadian sleep wake cycle sleepGO:004518710.014
response to biotic stimulusGO:0009607970.014
regulation of synapse organizationGO:005080730.014
nitric oxide metabolic processGO:004620920.014
semicircular canal developmentGO:0060872240.014
regulation of calcium ion transportGO:005192420.014
microtubule cytoskeleton organization involved in mitosisGO:190285010.014
leukocyte proliferationGO:007066110.014
regulation of cell differentiationGO:00455951420.014
retinal rod cell developmentGO:004654840.014
response to other organismGO:0051707970.014
cellular protein modification processGO:00064641000.014
g1 s transition of mitotic cell cycleGO:000008210.014
sensory system developmentGO:0048880760.014
reactive nitrogen species metabolic processGO:200105700.014
regulation of membrane potentialGO:0042391230.014
positive regulation of metabolic processGO:00098931080.014
forebrain cell migrationGO:002188510.014
gland developmentGO:00487321430.014
retina morphogenesis in camera type eyeGO:0060042790.014
phosphate containing compound metabolic processGO:00067961080.014
l amino acid transportGO:001580710.014
regulation of proteolysis involved in cellular protein catabolic processGO:190305010.014
histone h3 k4 methylationGO:005156820.014
regulation of myotube differentiationGO:001083020.014
action potentialGO:0001508190.014
pericardium developmentGO:006003910.014
regulation of protein complex assemblyGO:004325430.014
regulation of gtpase activityGO:004308720.014
deathGO:00162651210.014
ion transmembrane transportGO:0034220910.014
response to woundingGO:00096111160.014
lipid catabolic processGO:001604240.014
positive regulation of neuron deathGO:190121610.013
transcription from rna polymerase ii promoterGO:0006366800.013
cellular response to chemical stimulusGO:00708871570.013
sensory perception of painGO:001923310.013
negative regulation of sequestering of calcium ionGO:005128340.013
g2 m transition of mitotic cell cycleGO:000008640.013
ameboidal type cell migrationGO:00016671430.013
rna transportGO:005065820.013
chemotaxisGO:00069351040.013
g protein coupled receptor signaling pathwayGO:0007186740.013
neurological system processGO:0050877620.013
positive regulation of inflammatory responseGO:005072910.013
somatic cell dna recombinationGO:001644410.013
cytoskeleton organizationGO:0007010960.013
ventral spinal cord developmentGO:0021517350.013
response to foodGO:003209410.013
mononuclear cell proliferationGO:003294310.013
nucleic acid transportGO:005065720.013
establishment of rna localizationGO:005123630.013
positive regulation of jnk cascadeGO:004633030.013
cytokinesisGO:000091030.013
establishment of synaptic vesicle localizationGO:009748010.013
photoreceptor cell fate commitmentGO:004655210.013
regulation of protein complex disassemblyGO:004324410.013
digestive system developmentGO:00551232890.013
smooth muscle contractionGO:000693920.013
olfactory lobe developmentGO:002198840.013
somatic muscle developmentGO:000752540.013
neuronal action potentialGO:0019228180.013
determination of bilateral symmetryGO:00098552040.013
response to hexoseGO:000974630.013
regulation of cellular protein catabolic processGO:190336210.013
negative regulation of chromosome organizationGO:200125110.013
response to radiationGO:0009314510.013
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domainsGO:000246040.013
regulation of mrna splicing via spliceosomeGO:004802430.013
regulation of protein bindingGO:004339330.013
positive regulation of canonical wnt signaling pathwayGO:009026340.013
neuromuscular synaptic transmissionGO:000727420.012
glial cell proliferationGO:001400940.012
positive regulation of gtpase activityGO:004354710.012
transmission of nerve impulseGO:0019226190.012
gas transportGO:001566930.012
antimicrobial humoral responseGO:001973020.012
dopamine metabolic processGO:004241720.012
phosphorus metabolic processGO:00067931090.012
cell matrix adhesionGO:000716040.012
enzyme linked receptor protein signaling pathwayGO:00071671060.012
regulation of apoptotic processGO:0042981980.012
calcium mediated signalingGO:001972220.012
stem cell differentiationGO:00488631170.012
macroautophagyGO:001623610.012
muscle cell differentiationGO:00426921390.012
response to abiotic stimulusGO:00096281220.012
mechanosensory behaviorGO:000763820.012
multicellular organismal macromolecule metabolic processGO:004425920.012
detection of chemical stimulusGO:000959340.012
response to hydrogen peroxideGO:004254230.012
response to unfolded proteinGO:000698620.012
lymphocyte proliferationGO:004665110.012
cell migrationGO:00164772370.012
neuron projection developmentGO:00311751800.012
mesenchyme developmentGO:00604851270.012
axon guidanceGO:0007411860.012
determination of left right symmetryGO:00073681790.012
response to monosaccharideGO:003428430.012
branchiomotor neuron axon guidanceGO:002178510.012
protein modification processGO:00362111000.012
axis specificationGO:0009798430.012
positive regulation of macromolecule metabolic processGO:0010604930.012

usp39 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.028
musculoskeletal system diseaseDOID:1700.016
nervous system diseaseDOID:86300.015
sensory system diseaseDOID:005015500.013
disease of cellular proliferationDOID:1456600.013