Danio rerio

54 known processes

cdx1a

caudal type homeo box transcription factor 1 a

(Aliases: cdx2)

cdx1a biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
central nervous system developmentGO:00074173870.669
brain developmentGO:00074202930.659
head developmentGO:00603223030.422
biosynthetic processGO:00090582940.364
sensory organ developmentGO:00074233930.353
regulation of cellular biosynthetic processGO:00313262450.352
negative regulation of biological processGO:00485193040.328
regulation of multicellular organismal developmentGO:20000262230.299
hormone transportGO:000991420.299
transcription from rna polymerase ii promoterGO:0006366800.290
regulation of nitrogen compound metabolic processGO:00511712510.272
lipid storageGO:001991510.270
cellular biosynthetic processGO:00442492860.268
heart developmentGO:00075073130.260
localization of cellGO:00516742440.254
generation of neuronsGO:00486993850.252
tube morphogenesisGO:00352393490.239
positive regulation of cell fate commitmentGO:001045510.237
regionalizationGO:00030022740.220
organic substance biosynthetic processGO:19015762890.219
blood vessel developmentGO:00015682460.211
negative regulation of cellular processGO:00485232830.209
regulation of nucleobase containing compound metabolic processGO:00192192500.181
aromatic compound biosynthetic processGO:00194382170.170
foregut morphogenesisGO:000744040.168
heart loopingGO:0001947940.155
hormone secretionGO:004687920.154
eye developmentGO:00016542770.150
regulation of gene expressionGO:00104682650.144
embryonic foregut morphogenesisGO:004861710.144
vasculature developmentGO:00019442780.143
response to stressGO:00069502630.140
determination of left right symmetryGO:00073681790.139
digestive system developmentGO:00551232890.138
gene expressionGO:00104672520.135
neuron developmentGO:00486662620.132
embryo development ending in birth or egg hatchingGO:00097922710.129
locomotionGO:00400113130.127
cellular amine metabolic processGO:004410620.126
adult behaviorGO:003053420.126
morphogenesis of an epitheliumGO:00020093330.126
cell differentiation in spinal cordGO:0021515400.125
regulation of response to stimulusGO:00485832690.120
signal transductionGO:00071654550.120
cell motilityGO:00488702440.111
cellular aromatic compound metabolic processGO:00067252950.108
cell surface receptor signaling pathwayGO:00071663250.107
nucleobase containing compound metabolic processGO:00061392740.106
nucleic acid templated transcriptionGO:00976591810.106
regulation of hormone secretionGO:004688320.103
regulation of biosynthetic processGO:00098892500.099
regulation of rna biosynthetic processGO:20011412130.099
retina development in camera type eyeGO:00600411460.098
appendage developmentGO:0048736800.097
response to external stimulusGO:00096052640.097
rna biosynthetic processGO:00327741810.095
embryonic organ developmentGO:00485683810.095
regulation of biological qualityGO:00650082630.094
maintenance of locationGO:005123540.091
heterocycle biosynthetic processGO:00181302150.091
regulation of rna metabolic processGO:00512522240.091
regulation of macromolecule biosynthetic processGO:00105562250.090
determination of bilateral symmetryGO:00098552040.090
regulation of cellular metabolic processGO:00313233200.089
nucleobase containing compound biosynthetic processGO:00346542050.089
digestive tract developmentGO:00485652650.088
agingGO:000756820.088
pancreas developmentGO:0031016840.087
regulation of primary metabolic processGO:00800903110.084
negative regulation of rna biosynthetic processGO:1902679450.083
embryonic organ morphogenesisGO:00485622740.083
cellular component biogenesisGO:00440851780.081
cellular nitrogen compound biosynthetic processGO:00442712180.080
regulation of cellular macromolecule biosynthetic processGO:20001122220.079
sensory organ morphogenesisGO:00905962000.078
regulation of macromolecule metabolic processGO:00602553170.077
regulation of metabolic processGO:00192223590.075
eye morphogenesisGO:00485921440.074
regulation of neural precursor cell proliferationGO:200017730.073
embryonic heart tube developmentGO:00350501330.070
lipid biosynthetic processGO:0008610220.069
centrosome organizationGO:005129710.068
negative regulation of transcription dna templatedGO:0045892450.068
heterocycle metabolic processGO:00464832900.068
carboxylic acid metabolic processGO:0019752220.067
regulation of multicellular organismal processGO:00512392770.066
chordate embryonic developmentGO:00430092710.066
cell fate specificationGO:0001708680.065
organic cyclic compound biosynthetic processGO:19013622230.064
peptide transportGO:001583310.062
larval developmentGO:000216420.062
cell fate commitmentGO:0045165990.061
positive regulation of cellular processGO:00485222010.061
regulation of transcription dna templatedGO:00063552130.059
forebrain developmentGO:0030900960.059
bmp signaling pathwayGO:0030509520.058
mesenchyme developmentGO:00604851270.058
determination of heart left right asymmetryGO:00613711170.058
negative regulation of mesodermal cell fate specificationGO:004266230.058
positive regulation of cellular component biogenesisGO:004408930.056
specification of symmetryGO:00097992040.056
epithelial cell differentiationGO:00308551160.056
regulation of developmental processGO:00507932470.056
regulation of nucleic acid templated transcriptionGO:19035062130.055
organic cyclic compound metabolic processGO:19013603010.055
cellular component movementGO:00069283350.055
somitogenesisGO:0001756870.053
blood vessel morphogenesisGO:00485142160.053
regulation of cellular amine metabolic processGO:003323800.053
transcription dna templatedGO:00063511810.053
fin developmentGO:0033333770.052
digestive tract morphogenesisGO:00485462310.052
immune system processGO:00023762410.051
cellular nitrogen compound metabolic processGO:00346412900.051
neural retina developmentGO:0003407490.051
pectoral fin developmentGO:0033339500.050
amine metabolic processGO:000930820.050
regulation of transcription from rna polymerase ii promoterGO:00063571140.049
embryonic heart tube morphogenesisGO:00031431080.048
immune system developmentGO:00025201910.047
retina layer formationGO:0010842240.046
neuroblast proliferationGO:000740520.045
regulation of cell communicationGO:00106462320.045
negative regulation of nucleic acid templated transcriptionGO:1903507450.044
somite developmentGO:0061053960.044
regulation of gastrulationGO:0010470240.044
regulation of signal transductionGO:00099662250.044
renal system developmentGO:0072001940.044
thioester metabolic processGO:003538310.043
post embryonic morphogenesisGO:000988640.043
endocrine system developmentGO:0035270650.043
response to nutrientGO:000758430.042
ventral spinal cord developmentGO:0021517350.042
regulation of stem cell differentiationGO:200073640.042
homeostatic processGO:00425921420.040
macromolecule biosynthetic processGO:00090592270.040
cell proliferation in hindbrainGO:002153440.040
axis specificationGO:0009798430.040
neural tube patterningGO:0021532330.040
negative regulation of rna metabolic processGO:0051253480.039
camera type eye developmentGO:00430102220.039
retina morphogenesis in camera type eyeGO:0060042790.039
rna metabolic processGO:00160702190.039
cell projection organizationGO:00300302840.038
protein localization to nucleusGO:003450430.038
gastrulationGO:00073692080.038
regulation of localizationGO:00328791040.037
negative regulation of endodermal cell fate specificationGO:004266480.036
kidney developmentGO:0001822920.036
positive regulation of stem cell proliferationGO:200064810.036
cellular macromolecule biosynthetic processGO:00346452240.035
positive regulation of neural precursor cell proliferationGO:200017910.034
regulation of cell activationGO:005086510.034
positive regulation of muscle tissue developmentGO:190186310.034
endodermal cell fate commitmentGO:0001711180.034
liver developmentGO:0001889960.034
regulation of stem cell proliferationGO:007209120.034
oxoacid metabolic processGO:0043436310.033
response to monosaccharideGO:003428430.033
protein metabolic processGO:00195381830.033
growthGO:00400071740.033
positive regulation of biological processGO:00485182530.033
positive regulation of nitrogen compound metabolic processGO:0051173690.033
peripheral nervous system neuron differentiationGO:0048934280.033
embryonic camera type eye developmentGO:0031076290.032
regulation of neuron migrationGO:200122220.032
negative regulation of gastrulationGO:2000542110.032
muscle tissue developmentGO:00605371100.032
compound eye developmentGO:004874920.032
cardiac muscle cell differentiationGO:0055007300.031
skeletal system developmentGO:00015011810.031
aorta morphogenesisGO:003590930.031
negative regulation of developmental processGO:0051093650.031
response to vitaminGO:003327330.031
blood circulationGO:0008015870.031
dorsal ventral pattern formationGO:00099531250.031
ameboidal type cell migrationGO:00016671430.030
skeletal muscle organ developmentGO:0060538780.030
regulation of reproductive processGO:200024140.030
neuron differentiationGO:00301823530.030
multicellular organism growthGO:003526440.030
response to drugGO:004249330.030
negative regulation of cellular macromolecule biosynthetic processGO:2000113480.030
positive regulation of response to stimulusGO:0048584800.029
small molecule metabolic processGO:0044281770.029
embryonic appendage morphogenesisGO:0035113300.029
negative regulation of transcription from rna polymerase ii promoterGO:0000122160.029
floor plate morphogenesisGO:0033505120.028
positive regulation of protein complex assemblyGO:003133420.028
spinal cord oligodendrocyte cell fate specificationGO:002153020.028
mechanoreceptor differentiationGO:0042490370.028
macromolecule modificationGO:00434121110.028
regulation of multicellular organism growthGO:004001440.028
organic acid metabolic processGO:0006082310.027
transcription from rna polymerase iii promoterGO:000638310.027
negative regulation of wnt signaling pathway involved in heart developmentGO:000330820.027
endoderm developmentGO:0007492490.027
anterior posterior pattern specificationGO:00099521520.026
fin morphogenesisGO:0033334530.026
epidermis developmentGO:0008544480.026
hematopoietic or lymphoid organ developmentGO:00485341910.025
endodermal digestive tract morphogenesisGO:006103120.025
negative regulation of gene expressionGO:0010629650.025
nucleic acid metabolic processGO:00903042440.025
regulation of transcription involved in cell fate commitmentGO:006085010.025
cardiac muscle tissue developmentGO:0048738480.025
kupffer s vesicle developmentGO:0070121500.025
response to vitamin b3GO:003355220.025
appendage morphogenesisGO:0035107560.025
angiogenesisGO:00015251580.024
system processGO:00030081850.024
epithelial tube morphogenesisGO:00605621480.024
transportGO:00068102200.024
regulation of wnt signaling pathwayGO:0030111530.024
epidermal cell fate specificationGO:000995740.024
cell projection morphogenesisGO:00488582440.024
regulation of cardiac muscle cell differentiationGO:200072510.024
positive regulation of gene expressionGO:0010628710.024
lipid metabolic processGO:0006629520.023
regulation of embryonic developmentGO:0045995470.023
ear developmentGO:00435831270.023
multi organism processGO:00517041340.023
regulation of cell developmentGO:00602841000.023
cellular lipid metabolic processGO:0044255360.023
gland developmentGO:00487321430.022
heart morphogenesisGO:00030071560.022
positive regulation of biosynthetic processGO:0009891680.022
regulation of endodermal cell fate specificationGO:0042663150.022
hindbrain developmentGO:0030902910.022
developmental growth involved in morphogenesisGO:0060560860.022
skeletal muscle tissue developmentGO:0007519670.022
cardiocyte differentiationGO:0035051440.022
negative regulation of endodermal cell differentiationGO:190322580.022
hepaticobiliary system developmentGO:0061008980.021
positive regulation of striated muscle tissue developmentGO:004584410.021
positive regulation of cellular metabolic processGO:0031325940.021
forebrain regionalizationGO:002187140.021
oligodendrocyte cell fate specificationGO:002177840.021
cellular macromolecule metabolic processGO:00442603910.021
regulation of locomotionGO:0040012550.021
muscle fiber developmentGO:0048747520.021
cell migrationGO:00164772370.021
epidermal cell differentiationGO:0009913360.021
cranial nerve developmentGO:0021545420.021
regulation of cell differentiationGO:00455951420.021
acyl coa metabolic processGO:000663710.020
neuron projection developmentGO:00311751800.020
wnt signaling pathwayGO:0016055800.020
striated muscle tissue developmentGO:00147061100.020
ear morphogenesisGO:0042471640.020
cellular response to decreased oxygen levelsGO:003629410.020
negative regulation of biosynthetic processGO:0009890550.020
inner ear developmentGO:00488391260.019
nitrogen compound metabolic processGO:00068073190.019
positive regulation of cell activationGO:005086710.019
central nervous system neuron differentiationGO:0021953740.019
developmental pigmentationGO:0048066480.019
negative regulation of signal transductionGO:0009968940.019
neuron fate specificationGO:0048665200.019
mesenchymal cell differentiationGO:0048762870.019
regulation of transmembrane receptor protein serine threonine kinase signaling pathwayGO:0090092500.019
water homeostasisGO:003010440.018
stem cell differentiationGO:00488631170.018
formation of primary germ layerGO:0001704620.018
macromolecule localizationGO:0033036540.018
positive regulation of cell communicationGO:0010647560.018
protein targeting to nucleusGO:004474430.018
ectodermal placode developmentGO:0071696370.018
skin developmentGO:0043588540.018
regulation of peptidyl tyrosine phosphorylationGO:005073010.018
adenohypophysis developmentGO:0021984150.018
post anal tail morphogenesisGO:0036342190.017
nucleocytoplasmic transportGO:000691340.017
floor plate formationGO:0021508120.017
endoderm formationGO:0001706290.017
convergent extensionGO:00600261180.017
regulation of ion transmembrane transporter activityGO:003241220.017
stem cell proliferationGO:007208940.017
type b pancreatic cell developmentGO:000332340.017
centrosome cycleGO:000709810.016
notochord developmentGO:0030903540.016
regulation of nodal signaling pathwayGO:190010740.016
cell part morphogenesisGO:00329902460.016
spindle assemblyGO:005122520.016
spinal cord motor neuron cell fate specificationGO:002152080.016
negative regulation of cellular biosynthetic processGO:0031327550.016
neural crest cell developmentGO:0014032620.016
negative regulation of muscle tissue developmentGO:190186220.016
neural tube developmentGO:0021915620.016
negative regulation of stem cell differentiationGO:200073720.016
chemotaxisGO:00069351040.016
positive regulation of transportGO:005105020.016
cell morphogenesisGO:00009022890.016
embryonic digestive tract morphogenesisGO:004855730.016
negative regulation of oocyte developmentGO:006028320.015
photoreceptor cell fate commitmentGO:004655210.015
negative regulation of protein complex assemblyGO:003133310.015
eye photoreceptor cell differentiationGO:0001754450.015
ectodermal placode morphogenesisGO:0071697320.015
positive regulation of metabolic processGO:00098931080.015
positive regulation of cellular amine metabolic processGO:003324000.015
somite specificationGO:0001757120.015
positive regulation of embryonic developmentGO:004001930.015
mesenchymal cell developmentGO:0014031780.015
single organism organelle organizationGO:19025891990.015
response to organic substanceGO:00100331530.015
organonitrogen compound metabolic processGO:1901564740.015
cellular ketone metabolic processGO:0042180110.015
amide biosynthetic processGO:004360410.015
exocrine pancreas developmentGO:0031017280.015
regulation of anatomical structure morphogenesisGO:00226031300.015
response to glucoseGO:000974930.015
endodermal cell differentiationGO:0035987190.014
positive regulation of cellular biosynthetic processGO:0031328680.014
establishment of localizationGO:00512342440.014
inner ear receptor cell fate commitmentGO:006012040.014
negative regulation of protein phosphorylationGO:000193340.014
response to chemicalGO:00422213200.014
non canonical wnt signaling pathway involved in heart developmentGO:006134120.014
protein complex biogenesisGO:0070271300.014
organic substance transportGO:0071702580.014
cellular component assemblyGO:00226071700.014
alcohol biosynthetic processGO:004616520.014
positive regulation of secretionGO:005104710.014
periodic partitioningGO:000736510.014
otic vesicle developmentGO:0071599420.014
negative regulation of metabolic processGO:0009892860.013
regulation of mesodermal cell fate specificationGO:004266190.013
positive regulation of cellular amino acid metabolic processGO:004576400.013
embryonic digestive tract developmentGO:004856640.013
heart processGO:0003015710.013
peripheral nervous system developmentGO:0007422550.013
cellular amino acid metabolic processGO:000652070.013
endocrine processGO:005088620.013
common bile duct developmentGO:0061009130.013
single organism metabolic processGO:00447102170.013
cell proliferationGO:0008283800.013
eye photoreceptor cell developmentGO:0042462300.013
negative regulation of wnt signaling pathwayGO:0030178300.013
production of molecular mediator of immune responseGO:000244020.013
protein importGO:001703830.013
response to hexoseGO:000974630.013
negative regulation of gliogenesisGO:001401410.013
cardiac conduction system developmentGO:000316110.013
stem cell developmentGO:0048864820.013
positive regulation of striated muscle cell differentiationGO:005115510.013
photoreceptor cell fate specificationGO:004370410.013
regulation of signalingGO:00230512350.013
regulation of angiogenesisGO:0045765260.012
glial cell differentiationGO:0010001420.012
lateral line developmentGO:0048882660.012
mesoderm morphogenesisGO:0048332510.012
muscle structure developmentGO:00610611960.012
pigmentationGO:0043473850.012
striated muscle cell differentiationGO:00511461290.012
cell proliferation in forebrainGO:002184630.012
cellular component morphogenesisGO:00329893360.012
single organism nuclear importGO:190259330.012
regulation of transcription from rna polymerase iii promoterGO:000635910.012
neural crest cell differentiationGO:0014033720.012
positive regulation of neuron migrationGO:200122420.012
skeletal muscle fiber developmentGO:0048741350.012
negative regulation of nucleobase containing compound metabolic processGO:0045934590.012
cellular protein modification processGO:00064641000.012
axon developmentGO:00615641660.011
regulation of apoptotic processGO:0042981980.011
oocyte maturationGO:000155640.011
muscle cell differentiationGO:00426921390.011
regulation of smoothened signaling pathwayGO:0008589180.011
regulation of cell motilityGO:2000145460.011
behaviorGO:0007610740.011
regulation of canonical wnt signaling pathwayGO:0060828340.011
regulation of epithelial cell proliferationGO:005067830.011
regulation of cellular amino acid metabolic processGO:000652100.011
negative regulation of signalingGO:0023057960.011
cardiac cell fate commitmentGO:006091110.011
spinal cord developmentGO:0021510460.011
locomotory behaviorGO:0007626340.011
positive regulation of signalingGO:0023056560.011
cell deathGO:00082191210.011
positive regulation of multicellular organismal processGO:0051240520.011
positive regulation of cytosolic calcium ion concentrationGO:000720440.011
regulation of mesoderm developmentGO:2000380110.011
microtubule organizing center organizationGO:003102310.011
endocrine pancreas developmentGO:0031018270.010
eye field cell fate commitment involved in camera type eye formationGO:006089830.010
positive regulation of nucleobase containing compound metabolic processGO:0045935690.010
gall bladder developmentGO:006101010.010
negative regulation of macromolecule metabolic processGO:0010605760.010
forebrain morphogenesisGO:004885360.010
rostrocaudal neural tube patterningGO:0021903290.010
signal transduction downstream of smoothenedGO:000722710.010

cdx1a disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.195
musculoskeletal system diseaseDOID:1700.034
nervous system diseaseDOID:86300.019
disease of metabolismDOID:001466700.019
cardiovascular system diseaseDOID:128700.018
diabetes mellitusDOID:935100.015
glucose metabolism diseaseDOID:419400.015
acquired metabolic diseaseDOID:006015800.015
carbohydrate metabolism diseaseDOID:005001300.015
type 2 diabetes mellitusDOID:935200.015
connective tissue diseaseDOID:6500.015
inherited metabolic disorderDOID:65500.014
electroclinical syndromeDOID:005070100.013
brain diseaseDOID:93600.013
central nervous system diseaseDOID:33100.013
epilepsy syndromeDOID:182600.013
dysostosisDOID:193400.011
bone development diseaseDOID:008000600.011
bone diseaseDOID:008000100.011